RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 TSHZ2Q9NRE2 1034 aa17.31■□□□□ 0.36
RABGGTA-206ENST00000558649 EYSQ5T1H1 3165 aa17.3■□□□□ 0.36
RABGGTA-206ENST00000558649 OGTO15294 1046 aa17.3■□□□□ 0.36
RABGGTA-206ENST00000558649 CXCL8P10145 99 aa17.3■□□□□ 0.36
RABGGTA-206ENST00000558649 TUSC3Q13454 348 aa17.3■□□□□ 0.36
RABGGTA-206ENST00000558649 EP400NLQ6ZTU2 488 aa17.3■□□□□ 0.36
RABGGTA-206ENST00000558649 TMC7Q7Z402 723 aa17.3■□□□□ 0.36
RABGGTA-206ENST00000558649 ADGRD2Q7Z7M1 963 aa17.3■□□□□ 0.36
RABGGTA-206ENST00000558649 RBM23Q86U06 439 aaKnown RBP17.3■□□□□ 0.36
RABGGTA-206ENST00000558649 HASPINQ8TF76 798 aa17.3■□□□□ 0.36
RABGGTA-206ENST00000558649 NOC3LQ8WTT2 800 aaKnown RBP17.3■□□□□ 0.36
RABGGTA-206ENST00000558649 POMGNT1Q8WZA1 660 aa17.3■□□□□ 0.36
RABGGTA-206ENST00000558649 FAM212AQ96EL1 285 aa17.3■□□□□ 0.36
RABGGTA-206ENST00000558649 PAAF1Q9BRP4 392 aa17.3■□□□□ 0.36
RABGGTA-206ENST00000558649 IGFLR1Q9H665 355 aa17.3■□□□□ 0.36
RABGGTA-206ENST00000558649 SLC39A2Q9NP94 309 aa17.3■□□□□ 0.36
RABGGTA-206ENST00000558649 EXOC1Q9NV70 894 aa17.3■□□□□ 0.36
RABGGTA-206ENST00000558649 LZTS1Q9Y250 596 aa17.3■□□□□ 0.36
RABGGTA-206ENST00000558649 A0A0B4J269 797 aa17.29■□□□□ 0.36
RABGGTA-206ENST00000558649 SMIM28A0A1B0GU29 152 aa17.29■□□□□ 0.36
RABGGTA-206ENST00000558649 PVALEFA0A1B0GWK0 134 aa17.29■□□□□ 0.36
RABGGTA-206ENST00000558649 CARNS1A5YM72 827 aa17.29■□□□□ 0.36
RABGGTA-206ENST00000558649 SPAG1Q07617 926 aa17.29■□□□□ 0.36
RABGGTA-206ENST00000558649 NELFCDQ8IXH7 590 aa17.29■□□□□ 0.36
RABGGTA-206ENST00000558649 VPS52Q8N1B4 723 aa17.29■□□□□ 0.36
RABGGTA-206ENST00000558649 AUTS2Q8WXX7 1259 aa17.29■□□□□ 0.36
RABGGTA-206ENST00000558649 GOLGA2P5Q9HBQ8 144 aa17.29■□□□□ 0.36
RABGGTA-206ENST00000558649 MARCH5Q9NX47 278 aa17.29■□□□□ 0.36
RABGGTA-206ENST00000558649 AGO2Q9UKV8 859 aaKnown RBP17.29■□□□□ 0.36
RABGGTA-206ENST00000558649 MEFVO15553 781 aaPredicted RBP17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 KLRC4O43908 158 aa17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 GADD45BO75293 160 aaPredicted RBP17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 CLTAP09496 248 aa17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 GTF2F1P35269 517 aaKnown RBP eCLIP17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 NRIP1P48552 1158 aa17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 ACOT2P49753 483 aa17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 FAM160A1Q05DH4 1040 aa17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 PPP2R3AQ06190 1150 aa17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 HSP90AA2PQ14568 343 aaPredicted RBP17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 NAB2Q15742 525 aa17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 SLC10A6Q3KNW5 377 aa17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 KMT5BQ4FZB7 885 aa17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 SLFN12LQ6IEE8 588 aa17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 DDX53Q86TM3 631 aaKnown RBP17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 FMR1NBQ8N0W7 255 aaPredicted RBP17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 ZMAT2Q96NC0 199 aaKnown RBP17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 PPP1R10Q96QC0 940 aaKnown RBP17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 COLEC11Q9BWP8 271 aa17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 VN1R3Q9BXE9 311 aa17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 TMEM206Q9H813 350 aa17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 RPF1Q9H9Y2 349 aaKnown RBP17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 CNTN3Q9P232 1028 aa17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 COL6A3P12111 3177 aa17.28■□□□□ 0.36
RABGGTA-206ENST00000558649 ANK1P16157 1881 aa17.27■□□□□ 0.36
RABGGTA-206ENST00000558649 FSCN2O14926 492 aa17.27■□□□□ 0.36
RABGGTA-206ENST00000558649 EIF3DO15371 548 aaKnown RBP eCLIP17.27■□□□□ 0.36
RABGGTA-206ENST00000558649 FAM189A1O60320 539 aa17.27■□□□□ 0.36
RABGGTA-206ENST00000558649 RPN1P04843 607 aaKnown RBP17.27■□□□□ 0.36
RABGGTA-206ENST00000558649 ADSSP30520 456 aa17.27■□□□□ 0.36
RABGGTA-206ENST00000558649 EHHADHQ08426 723 aa17.27■□□□□ 0.36
RABGGTA-206ENST00000558649 HYAL1Q12794 435 aa17.27■□□□□ 0.36
RABGGTA-206ENST00000558649 SMC1AQ14683 1233 aaKnown RBP17.27■□□□□ 0.36
RABGGTA-206ENST00000558649 ENOX2Q16206 610 aaKnown RBP17.27■□□□□ 0.36
RABGGTA-206ENST00000558649 KYAT1Q16773 422 aa17.27■□□□□ 0.36
RABGGTA-206ENST00000558649 ALKAL1Q6UXT8 129 aa17.27■□□□□ 0.36
RABGGTA-206ENST00000558649 PPP2R3CQ969Q6 453 aa17.27■□□□□ 0.36
RABGGTA-206ENST00000558649 C18orf25Q96B23 403 aaPredicted RBP17.27■□□□□ 0.36
RABGGTA-206ENST00000558649 SAAL1Q96ER3 474 aa17.27■□□□□ 0.36
RABGGTA-206ENST00000558649 CCDC34Q96HJ3 373 aa17.27■□□□□ 0.36
RABGGTA-206ENST00000558649 IPO9Q96P70 1041 aaKnown RBP17.27■□□□□ 0.36
RABGGTA-206ENST00000558649 ZBP1Q9H171 429 aa17.27■□□□□ 0.36
RABGGTA-206ENST00000558649 PCIF1Q9H4Z3 704 aa17.27■□□□□ 0.36
RABGGTA-206ENST00000558649 REV3LO60673 3130 aa17.27■□□□□ 0.35
RABGGTA-206ENST00000558649 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 HIDE1A8MVS5 230 aa17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 LACTBL1A8MY62 500 aa17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 C2CD2LO14523 706 aa17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 PER2O15055 1255 aa17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 TADA2AO75478 443 aa17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 KIF4AO95239 1232 aa17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 MYL1P05976 194 aa17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 CLCNKBP51801 687 aa17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 SOX4Q06945 474 aaPredicted RBP17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 PNOCQ13519 176 aa17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 SNW1Q13573 536 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 BMS1Q14692 1282 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 POSTNQ15063 836 aa17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 ARMCX5Q6P1M9 558 aa17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 EPM2AIP1Q7L775 607 aaPredicted RBP17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 ZSWIM2Q8NEG5 633 aa17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 HLA-CQ95604 372 aa17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 CCDC47Q96A33 483 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 KIF12Q96FN5 646 aa17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 B3GALT6Q96L58 329 aa17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 CBWD1Q9BRT8 395 aa17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 FAM213AQ9BRX8 229 aa17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 TLE6Q9H808 572 aa17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 NGRNQ9NPE2 291 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 SLC38A7Q9NVC3 462 aa17.26■□□□□ 0.35
RABGGTA-206ENST00000558649 CLDND1Q9NY35 253 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms