RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 PGS1Q32NB8 556 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 FASTKD1Q53R41 847 aaKnown RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 KLHDC7AQ5VTJ3 777 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 IZUMO2Q6UXV1 221 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 FAM178BQ8IXR5 827 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 CALN1Q9BXU9 219 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 ARMC7Q9H6L4 198 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 HEY1Q9Y5J3 304 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 TRIM49BA6NDI0 452 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 TLR10Q9BXR5 811 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 TDRD9Q8NDG6 1382 aaKnown RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 A0A0U1RQJ8 604 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 XPOTO43592 962 aaKnown RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 RARGP13631 454 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 ANPEPP15144 967 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 KCNA2P16389 499 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 SLC9A1P19634 815 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 KCTD19Q17RG1 926 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 COA7Q96BR5 231 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 COPG2Q9UBF2 871 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 NKX1-2Q9UD57 310 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 DNAL1Q4LDG9 190 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 OR6B2Q6IFH4 312 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 PGBD2Q6P3X8 592 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 KLHL17Q6TDP4 642 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 PATL1Q86TB9 770 aaKnown RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 NAT14Q8WUY8 206 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 DEPDC1BQ8WUY9 529 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 THUMPD3Q9BV44 507 aaKnown RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 CEP290O15078 2479 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 HLA-DOAP06340 250 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 GRIN1Q05586 938 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 GPR107Q5VW38 600 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 SLFN13Q68D06 897 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 TMA16Q96EY4 203 aaKnown RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 BTBD3Q9Y2F9 522 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 SNPHO15079 494 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 GUCY1B2O75343 617 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 CHEK2O96017 543 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 ABL1P00519 1130 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 CALB1P05937 261 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 MYL2P10916 166 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 DNAJC3Q13217 504 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 ZBED8Q8IZ13 594 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 TTC25Q96NG3 672 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 CHID1Q9BWS9 393 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 KLHL20Q9Y2M5 609 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 GPRASP1Q5JY77 1395 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 MIF4GDA9UHW6 222 aaKnown RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 ZNF197O14709 1029 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 STIP1P31948 543 aaKnown RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 SLC1A1P43005 524 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 CYB5RLQ6IPT4 315 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 MIGA2Q7L4E1 593 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 BNIPLQ7Z465 357 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 GATAD2AQ86YP4 633 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 KIF27Q86VH2 1401 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 MAPK10P53779 464 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 SEPT1Q8WYJ6 367 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 NOL6Q9H6R4 1146 aaKnown RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 BFARQ9NZS9 450 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 SPATA7Q9P0W8 599 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 RGSL1A5PLK6 1076 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 TSTA3Q13630 321 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 CAMK1DQ8IU85 385 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 MRPS7Q9Y2R9 242 aaKnown RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 POTECB2RU33 542 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 TRIM49D1C9J1S8 452 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 PLCG1P19174 1290 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 CDC27P30260 824 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 SYCP2LQ5T4T6 812 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 POMGNT1Q8WZA1 660 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 MARCH7Q9H992 704 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 CCDC182A6NF36 153 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 MPP3Q13368 585 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 ARMC4Q5T2S8 1044 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 IZUMO3Q5VZ72 239 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 TTC7BQ86TV6 843 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 MKNK1Q9BUB5 465 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 PCDH18Q9HCL0 1135 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 CD209Q9NNX6 404 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 PNMA6FA0A0J9YX94 578 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 MYL1P05976 194 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 VARSP26640 1264 aaKnown RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 TUBA3EQ6PEY2 450 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 GALNT15Q8N3T1 639 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 AENQ8WTP8 325 aaKnown RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 DENND2AQ9ULE3 1009 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 H3BRJ5 948 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 GGPS1O95749 300 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 ERVK-24P63145 666 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 SMU1Q2TAY7 513 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 LPCAT2Q7L5N7 544 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 SLFN12Q8IYM2 578 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 NDUFAF2Q8N183 169 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 LRRC59Q96AG4 307 aaKnown RBP3.88□□□□□ -1.79
ATXN3-248ENST00000558190 LRRC39Q96DD0 335 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 RERGLQ9H628 205 aa3.88□□□□□ -1.79
ATXN3-248ENST00000558190 DOLKQ9UPQ8 538 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms