RNA–Protein interactions for RNA: ENST00000552017.1

CBX3P5-201, Transcript of chromobox 3 pseudogene 5, humanhuman

BASIC

Gene CBX3P5, Length 521 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P5-201ENST00000552017 UBE2R2Q712K3 238 aaPredicted RBP4.69□□□□□ -1.66
CBX3P5-201ENST00000552017 MRGPRGQ86SM5 289 aa4.69□□□□□ -1.66
CBX3P5-201ENST00000552017 ARL6IP6Q8N6S5 226 aa4.69□□□□□ -1.66
CBX3P5-201ENST00000552017 CCDC89Q8N998 374 aa4.69□□□□□ -1.66
CBX3P5-201ENST00000552017 ATXN2LQ8WWM7 1075 aaKnown RBP4.69□□□□□ -1.66
CBX3P5-201ENST00000552017 GIMAP1Q8WWP7 306 aa4.69□□□□□ -1.66
CBX3P5-201ENST00000552017 ARL8AQ96BM9 186 aa4.69□□□□□ -1.66
CBX3P5-201ENST00000552017 CCDC34Q96HJ3 373 aa4.69□□□□□ -1.66
CBX3P5-201ENST00000552017 MAK16Q9BXY0 300 aaKnown RBP4.69□□□□□ -1.66
CBX3P5-201ENST00000552017 TMX1Q9H3N1 280 aa4.69□□□□□ -1.66
CBX3P5-201ENST00000552017 VEZTQ9HBM0 779 aa4.69□□□□□ -1.66
CBX3P5-201ENST00000552017 COMMD8Q9NX08 183 aa4.69□□□□□ -1.66
CBX3P5-201ENST00000552017 TMCC3Q9ULS5 477 aa4.69□□□□□ -1.66
CBX3P5-201ENST00000552017 MRPL42Q9Y6G3 142 aaKnown RBP4.69□□□□□ -1.66
CBX3P5-201ENST00000552017 XDHP47989 1333 aa4.69□□□□□ -1.66
CBX3P5-201ENST00000552017 SCRIBQ14160 1630 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 ZNF891A8MT65 544 aaPredicted RBP4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 MTSS1O43312 755 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 RPN1P04843 607 aaKnown RBP4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 KIR2DL3P43628 341 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 EVA1CP58658 441 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 SMAD3P84022 425 aaKnown RBP4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 DSG1Q02413 1049 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 UBE4AQ14139 1066 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 KRT72Q14CN4 511 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 VPS72Q15906 364 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 FAM214AQ32MH5 1076 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 PLEKHG6Q3KR16 790 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 PARP10Q53GL7 1025 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 FAM133BQ5BKY9 247 aaKnown RBP4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 MFSD4BQ5TF39 518 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 JAZF1Q86VZ6 243 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 BRSK2Q8IWQ3 736 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 GSPT2Q8IYD1 628 aaKnown RBP4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 RPUSD2Q8IZ73 545 aaKnown RBP4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 CMTM4Q8IZR5 234 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 PIK3C3Q8NEB9 887 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 MDGA1Q8NFP4 955 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 ZBTB10Q96DT7 871 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 IL17RAQ96F46 866 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 MNTQ99583 582 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 ORAI3Q9BRQ5 295 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 NOL10Q9BSC4 688 aaKnown RBP4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 MMTAG2Q9BU76 263 aaKnown RBP4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 DHX36Q9H2U1 1008 aaKnown RBP4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 RWDD1Q9H446 243 aaPredicted RBP4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 NRDE2Q9H7Z3 1164 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 RMI1Q9H9A7 625 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 RRAGDQ9NQL2 400 aaPredicted RBP4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 DKK3Q9UBP4 350 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 TRPS1Q9UHF7 1281 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 PCSK1NQ9UHG2 260 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 ASAP1Q9ULH1 1129 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 CD2APQ9Y5K6 639 aa4.68□□□□□ -1.66
CBX3P5-201ENST00000552017 FAM170AA1A519 330 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 ERICH4A6NGS2 130 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 ELL2O00472 640 aaPredicted RBP4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 CHL1O00533 1208 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 DAPK3O43293 454 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 CDKL5O76039 1030 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 IPO13O94829 963 aaKnown RBP4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 PCDH8O95206 1070 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 CFBP00751 764 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 FGAP02671 866 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 GAAP10253 952 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 HARSP12081 509 aaKnown RBP4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 NR4A1P22736 598 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 PSMA3P25788 255 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 NUCB2P80303 420 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 RAPGEF1Q13905 1077 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 E2F5Q15329 346 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 RABL3Q5HYI8 236 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 ZBTB41Q5SVQ8 909 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 MFSD5Q6N075 450 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 TIGD7Q6NT04 549 aaPredicted RBP4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 MYO1HQ8N1T3 1032 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 NXPE1Q8N323 547 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 TEX19Q8NA77 164 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 CHTF18Q8WVB6 975 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 ATRIPQ8WXE1 791 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 MAP3K14Q99558 947 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 OSBPL6Q9BZF3 934 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 LRRC27Q9C0I9 530 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 EXOC1Q9NV70 894 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 INTS7Q9NVH2 962 aaKnown RBP4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 FANCLQ9NW38 375 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 IFT57Q9NWB7 429 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 ZNHIT6Q9NWK9 470 aaKnown RBP4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 ING3Q9NXR8 418 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 QPCTLQ9NXS2 382 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 HOXC10Q9NYD6 342 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 COL4A3BPQ9Y5P4 624 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 DMRT1Q9Y5R6 373 aa4.67□□□□□ -1.66
CBX3P5-201ENST00000552017 IFRD1O00458 451 aaPredicted RBP4.66□□□□□ -1.66
CBX3P5-201ENST00000552017 TGM5O43548 720 aa4.66□□□□□ -1.66
CBX3P5-201ENST00000552017 ERLIN1O75477 346 aa4.66□□□□□ -1.66
CBX3P5-201ENST00000552017 MTRF1O75570 445 aaKnown RBP4.66□□□□□ -1.66
CBX3P5-201ENST00000552017 F2P00734 622 aa4.66□□□□□ -1.66
CBX3P5-201ENST00000552017 VIL1P09327 827 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms