RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 MAATS1Q7Z4T9 603 aa4.98□□□□□ -1.61
CNGA1-209ENST00000544810 ZNF589Q86UQ0 364 aaPredicted RBP4.98□□□□□ -1.61
CNGA1-209ENST00000544810 STAG2Q8N3U4 1231 aa4.98□□□□□ -1.61
CNGA1-209ENST00000544810 CAGE1Q8TC20 777 aa4.98□□□□□ -1.61
CNGA1-209ENST00000544810 ATRIPQ8WXE1 791 aa4.98□□□□□ -1.61
CNGA1-209ENST00000544810 LZICQ8WZA0 190 aa4.98□□□□□ -1.61
CNGA1-209ENST00000544810 ZNF570Q96NI8 536 aa4.98□□□□□ -1.61
CNGA1-209ENST00000544810 GORASP1Q9BQQ3 440 aa4.98□□□□□ -1.61
CNGA1-209ENST00000544810 BCO2Q9BYV7 579 aa4.98□□□□□ -1.61
CNGA1-209ENST00000544810 SPATC1LQ9H0A9 340 aa4.98□□□□□ -1.61
CNGA1-209ENST00000544810 KIAA1683Q9H0B3 1180 aa4.98□□□□□ -1.61
CNGA1-209ENST00000544810 HIPK3Q9H422 1215 aa4.98□□□□□ -1.61
CNGA1-209ENST00000544810 TMBIM4Q9HC24 238 aa4.98□□□□□ -1.61
CNGA1-209ENST00000544810 PLCB1Q9NQ66 1216 aa4.98□□□□□ -1.61
CNGA1-209ENST00000544810 FAM86C1Q9NVL1 165 aa4.98□□□□□ -1.61
CNGA1-209ENST00000544810 LMCD1Q9NZU5 365 aa4.98□□□□□ -1.61
CNGA1-209ENST00000544810 KCNH3Q9ULD8 1083 aa4.98□□□□□ -1.61
CNGA1-209ENST00000544810 SNX12Q9UMY4 172 aa4.98□□□□□ -1.61
CNGA1-209ENST00000544810 REXO2Q9Y3B8 237 aaKnown RBP4.98□□□□□ -1.61
CNGA1-209ENST00000544810 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.98□□□□□ -1.61
CNGA1-209ENST00000544810 ZNF536O15090 1300 aa4.98□□□□□ -1.61
CNGA1-209ENST00000544810 A0A1W2PQC6 194 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 LRRD1A4D1F6 860 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 ZNF233A6NK53 670 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 CCT8L1PA6NM43 557 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 ASAP2O43150 1006 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 TEX33O43247 280 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 FLOT1O75955 427 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 PENKP01210 267 aaPredicted RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 FAM163BP0C2L3 166 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 KIF5BP33176 963 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 CDK17Q00537 523 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 MECOMQ03112 1051 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 ZP2Q05996 745 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 CUL4BQ13620 913 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 BYSLQ13895 437 aaKnown RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 TRIP4Q15650 581 aaPredicted RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 CDC37Q16543 378 aaPredicted RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 MEA1Q16626 185 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 LONRF3Q496Y0 759 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 LRRC23Q53EV4 343 aaPredicted RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 SPDYCQ5MJ68 293 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 ZMYM1Q5SVZ6 1142 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 THEMIS2Q5TEJ8 643 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 SPTY2D1Q68D10 685 aaPredicted RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 RUFY4Q6ZNE9 571 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 CREG2Q8IUH2 290 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 CCDC63Q8NA47 563 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 KCTD12Q96CX2 325 aaKnown RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 IQCDQ96DY2 449 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 RRP36Q96EU6 259 aaKnown RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 RBM41Q96IZ5 413 aaKnown RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 HSH2DQ96JZ2 352 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 TRAPPC9Q96Q05 1148 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 MAP3K14Q99558 947 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 DNAJC7Q99615 494 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 NOC4LQ9BVI4 516 aaKnown RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 WNT8AQ9H1J5 351 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 DHX36Q9H2U1 1008 aaKnown RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 MROH8Q9H579 483 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 RPAP3Q9H6T3 665 aaPredicted RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 CNOT10Q9H9A5 744 aaKnown RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 ZNHIT6Q9NWK9 470 aaKnown RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 ABCF2Q9UG63 623 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 GMEB1Q9Y692 573 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 GBF1Q92538 1859 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 EYA2O00167 538 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 MEN1O00255 615 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 GH2P01242 217 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 ALDH3A1P30838 453 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 ABCD1P33897 745 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 CYLC1P35663 651 aaPredicted RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 HSPA9P38646 679 aaKnown RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 ZNF131P52739 623 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 CCL23P55773 120 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 SNX1Q13596 522 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 RASGRF1Q13972 1273 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 TTLL4Q14679 1199 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 IMMTQ16891 758 aaKnown RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 MCMDC2Q4G0Z9 681 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 HAUS3Q68CZ6 603 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 HIBCHQ6NVY1 386 aaPredicted RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 BMP8AQ7Z5Y6 402 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 SPRED2Q7Z698 418 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 AACSQ86V21 672 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 GSPT2Q8IYD1 628 aaKnown RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 ANKS4BQ8N8V4 417 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 SPATA4Q8NEY3 305 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 MED15Q96RN5 788 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 ALG13Q9NP73 1137 aaKnown RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 SAMSN1Q9NSI8 373 aaKnown RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 FAM8A1Q9UBU6 413 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 BAIAP2L1Q9UHR4 511 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 BLOC1S6Q9UL45 172 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 TLR6Q9Y2C9 796 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 PRRC2BQ5JSZ5 2229 aaKnown RBP4.97□□□□□ -1.61
CNGA1-209ENST00000544810 ZNF318Q5VUA4 2279 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 SIPA1L1O43166 1804 aa4.97□□□□□ -1.61
CNGA1-209ENST00000544810 COL4A4P53420 1690 aaPredicted RBP4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms