RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 SIM2Q14190 667 aaPredicted RBP13.46□□□□□ -0.25
DDX55-206ENST00000539934 EGFLAMQ63HQ2 1017 aa13.46□□□□□ -0.25
DDX55-206ENST00000539934 ARL6IP4Q66PJ3 421 aaKnown RBP13.46□□□□□ -0.25
DDX55-206ENST00000539934 ZNF746Q6NUN9 644 aaPredicted RBP13.46□□□□□ -0.25
DDX55-206ENST00000539934 ZNF449Q6P9G9 518 aa13.46□□□□□ -0.25
DDX55-206ENST00000539934 RSRC2Q7L4I2 434 aaKnown RBP13.46□□□□□ -0.25
DDX55-206ENST00000539934 PLA2G4DQ86XP0 818 aa13.46□□□□□ -0.25
DDX55-206ENST00000539934 SCAIQ8N9R8 606 aa13.46□□□□□ -0.25
DDX55-206ENST00000539934 DQX1Q8TE96 717 aaKnown RBP13.46□□□□□ -0.25
DDX55-206ENST00000539934 WDR60Q8WVS4 1066 aa13.46□□□□□ -0.25
DDX55-206ENST00000539934 GIMAP5Q96F15 307 aa13.46□□□□□ -0.25
DDX55-206ENST00000539934 SPATA17Q96L03 361 aa13.46□□□□□ -0.25
DDX55-206ENST00000539934 OSBPL1AQ9BXW6 950 aa13.46□□□□□ -0.25
DDX55-206ENST00000539934 MUSKO15146 869 aa13.45□□□□□ -0.26
DDX55-206ENST00000539934 USO1O60763 962 aaKnown RBP13.45□□□□□ -0.26
DDX55-206ENST00000539934 MNX1P50219 401 aaPredicted RBP13.45□□□□□ -0.26
DDX55-206ENST00000539934 ADCY7P51828 1080 aa13.45□□□□□ -0.26
DDX55-206ENST00000539934 GRAMD4Q6IC98 578 aa13.45□□□□□ -0.26
DDX55-206ENST00000539934 DHX40Q8IX18 779 aaKnown RBP13.45□□□□□ -0.26
DDX55-206ENST00000539934 CDKL2Q92772 493 aa13.45□□□□□ -0.26
DDX55-206ENST00000539934 RNF25Q96BH1 459 aaPredicted RBP13.45□□□□□ -0.26
DDX55-206ENST00000539934 GDF15Q99988 308 aa13.45□□□□□ -0.26
DDX55-206ENST00000539934 PCDHA5Q9Y5H7 936 aa13.45□□□□□ -0.26
DDX55-206ENST00000539934 LOC105371267A0A1B0GV96 52 aa13.45□□□□□ -0.26
DDX55-206ENST00000539934 USP17L10C9JJH3 530 aa13.45□□□□□ -0.26
DDX55-206ENST00000539934 H0YC42 278 aa13.45□□□□□ -0.26
DDX55-206ENST00000539934 TNFRSF10AO00220 468 aa13.45□□□□□ -0.26
DDX55-206ENST00000539934 PEX10O60683 326 aa13.45□□□□□ -0.26
DDX55-206ENST00000539934 IRAK1P51617 712 aa13.45□□□□□ -0.26
DDX55-206ENST00000539934 TPD52P55327 224 aaPredicted RBP13.45□□□□□ -0.26
DDX55-206ENST00000539934 LETM2Q2VYF4 491 aa13.45□□□□□ -0.26
DDX55-206ENST00000539934 ZNF598Q86UK7 904 aaKnown RBP13.45□□□□□ -0.26
DDX55-206ENST00000539934 LRRC8AQ8IWT6 810 aa13.45□□□□□ -0.26
DDX55-206ENST00000539934 PAF1Q8N7H5 531 aa13.45□□□□□ -0.26
DDX55-206ENST00000539934 GIMAP8Q8ND71 665 aaPredicted RBP13.45□□□□□ -0.26
DDX55-206ENST00000539934 PRPF18Q99633 342 aaKnown RBP13.45□□□□□ -0.26
DDX55-206ENST00000539934 BPIFA3Q9BQP9 254 aa13.45□□□□□ -0.26
DDX55-206ENST00000539934 B3GNT4Q9C0J1 378 aa13.45□□□□□ -0.26
DDX55-206ENST00000539934 VIPAS39Q9H9C1 493 aa13.45□□□□□ -0.26
DDX55-206ENST00000539934 POLG2Q9UHN1 485 aa13.45□□□□□ -0.26
DDX55-206ENST00000539934 ATPIF1Q9UII2 106 aa13.45□□□□□ -0.26
DDX55-206ENST00000539934 ARPC4-TTLL3A0A0A6YYG9 625 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 DPPA5A6NC42 116 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 F5H6K3 240 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 ZBTB5O15062 677 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 EIF3HO15372 352 aaKnown RBP eCLIP13.44□□□□□ -0.26
DDX55-206ENST00000539934 FLOT1O75955 427 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 PRPF6O94906 941 aaKnown RBP13.44□□□□□ -0.26
DDX55-206ENST00000539934 PORP16435 677 aaPredicted RBP13.44□□□□□ -0.26
DDX55-206ENST00000539934 KRT9P35527 623 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 TXLNAP40222 546 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 KLRC3Q07444 240 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 RIPK1Q13546 671 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 PPP1R18Q6NYC8 613 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 NEK8Q86SG6 692 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 BCAS4Q8TDM0 211 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 FAM167BQ9BTA0 163 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 TPK1Q9H3S4 243 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 PAK6Q9NQU5 681 aaPredicted RBP13.44□□□□□ -0.26
DDX55-206ENST00000539934 CLIC5Q9NZA1 410 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 NOP53Q9NZM5 478 aaKnown RBP13.44□□□□□ -0.26
DDX55-206ENST00000539934 IL1RAPL1Q9NZN1 696 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 ZNF112Q9UJU3 913 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 FADS3Q9Y5Q0 445 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 A0A087X0B3 334 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 MAP3K7O43318 606 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 CCNT1O60563 726 aaKnown RBP13.44□□□□□ -0.26
DDX55-206ENST00000539934 CES1P23141 567 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 LONP1P36776 959 aaKnown RBP13.44□□□□□ -0.26
DDX55-206ENST00000539934 MDM2Q00987 491 aaPredicted RBP13.44□□□□□ -0.26
DDX55-206ENST00000539934 WDR45BQ5MNZ6 344 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 FKBP1CQ5VVH2 108 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 DTHD1Q6ZMT9 781 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 ZNF365Q70YC5 407 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 NECAB2Q7Z6G3 386 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 SIAH1Q8IUQ4 282 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 CARNMT1Q8N4J0 409 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 C4orf32Q8N8J7 132 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 IRGQQ8WZA9 623 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 PYM1Q9BRP8 204 aaKnown RBP13.44□□□□□ -0.26
DDX55-206ENST00000539934 PIDD1Q9HB75 910 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 MTMR10Q9NXD2 777 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 TCEAL9Q9UHQ7 104 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 RIMKLBQ9ULI2 386 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 L3MBTL1Q9Y468 752 aa13.44□□□□□ -0.26
DDX55-206ENST00000539934 A0A1W2PPC1 479 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 LAD1O00515 517 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 GSTT2P0CG29 244 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 GSTT2BP0CG30 244 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 ZNF75DP51815 510 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 USP46P62068 366 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 SP140Q13342 867 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 RRP1BQ14684 758 aaKnown RBP13.43□□□□□ -0.26
DDX55-206ENST00000539934 SPCS2Q15005 226 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 IL17AQ16552 155 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 TREML2Q5T2D2 321 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 TMTC4Q5T4D3 741 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 GRAMD1CQ8IYS0 662 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 SPARTQ8N0X7 666 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 GMCL1P1Q8NEA9 526 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms