RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 LCMT1Q9UIC8 334 aa17.08■□□□□ 0.32
ATP2C1-224ENST00000533801 PTPRJQ12913 1337 aa17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 DKC1O60832 514 aaKnown RBP eCLIP17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 ATP4AP20648 1035 aa17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 HSD17B3P37058 310 aa17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 ABHD15Q6UXT9 468 aa17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 TAS1R3Q7RTX0 852 aa17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 RHOT2Q8IXI1 618 aa17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 KCTD17Q8N5Z5 321 aa17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 ZNF516Q92618 1163 aa17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 HAUS1Q96CS2 278 aa17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 PI4K2BG5E9Z4 385 aa17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 WEE2P0C1S8 567 aa17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 ADCY1Q08828 1119 aa17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 LRRC31Q6UY01 552 aa17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 ACTRT1Q8TDG2 376 aa17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 HES6Q96HZ4 224 aa17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 ASIC3Q9UHC3 531 aa17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 TRIM66O15016 1216 aa17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 ALDH5A1P51649 535 aaPredicted RBP17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 PPATQ06203 517 aa17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 HSDL1Q3SXM5 330 aa17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 HELQQ8TDG4 1101 aa17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 AFG3L2Q9Y4W6 797 aa17.07■□□□□ 0.32
ATP2C1-224ENST00000533801 SCP2P22307 547 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 CEP120Q8N960 986 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 REPS2Q8NFH8 660 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 MRRFQ96E11 262 aaKnown RBP17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 IMPG2Q9BZV3 1241 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 ZC3H4Q9UPT8 1303 aaKnown RBP17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 PIK3R2O00459 728 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 DDX3YO15523 660 aaKnown RBP17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 ATP2C2O75185 946 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 MYZAPP0CAP1 466 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 CYP2C8P10632 490 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 CLCN3P51790 818 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 TDRD10Q5VZ19 366 aaKnown RBP17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 PRUNE1Q86TP1 453 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 TAX1BP1Q86VP1 789 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 SCFD2Q8WU76 684 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 MTMR12Q9C0I1 747 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 SPATC1LQ9H0A9 340 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 NOVA2Q9UNW9 492 aaKnown RBP17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 SNCAIPQ9Y6H5 919 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 POLR2AP24928 1970 aaKnown RBP17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 ERLIN2O94905 339 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 FGFR4P22455 802 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 ITIH3Q06033 890 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 MTM1Q13496 603 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 MMS22LQ6ZRQ5 1243 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 CAPN12Q6ZSI9 719 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 FAM71AQ8IYT1 594 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 FMO2Q99518 471 aa17.06■□□□□ 0.32
ATP2C1-224ENST00000533801 MYO1FO00160 1098 aa17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 O00370 1275 aa17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 LYPLA2O95372 231 aa17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 AARSP49588 968 aaKnown RBP eCLIP17.05■□□□□ 0.321e-6■■■■■ 36.1
ATP2C1-224ENST00000533801 SEC24CP53992 1094 aa17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 HP1BP3Q5SSJ5 553 aaPredicted RBP17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 CCDC137Q6PK04 289 aaKnown RBP17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 RNF25Q96BH1 459 aaPredicted RBP17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 SELENOSQ9BQE4 189 aa17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 SPATA31C2B4DYI2 1134 aa17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 GOLGA8SH3BPF8 625 aa17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 NDUFAB1O14561 156 aa17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 ATF7P17544 494 aaPredicted RBP17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 SPATA33Q96N06 139 aa17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 ISCUQ9H1K1 167 aa17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 PDGFCQ9NRA1 345 aa17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 GOLGA8KD6RF30 607 aa17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 EDN1P05305 212 aa17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 GNA15P30679 374 aa17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 TRPC3Q13507 836 aa17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 KCTD2Q14681 263 aa17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 DHX37Q8IY37 1157 aaKnown RBP17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 FBXO25Q8TCJ0 367 aa17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 SHC3Q92529 594 aa17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 TNS1Q9HBL0 1735 aaKnown RBP17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 NRBP2Q9NSY0 501 aa17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 NOCTQ9UK39 431 aaKnown RBP17.05■□□□□ 0.32
ATP2C1-224ENST00000533801 CDR2Q01850 454 aa17.04■□□□□ 0.32
ATP2C1-224ENST00000533801 Q3C1V9 767 aa17.04■□□□□ 0.32
ATP2C1-224ENST00000533801 JAMLQ86YT9 394 aa17.04■□□□□ 0.32
ATP2C1-224ENST00000533801 ZSWIM1Q9BR11 485 aa17.04■□□□□ 0.32
ATP2C1-224ENST00000533801 ASCC2Q9H1I8 757 aaPredicted RBP17.04■□□□□ 0.32
ATP2C1-224ENST00000533801 LRRC4CQ9HCJ2 640 aa17.04■□□□□ 0.32
ATP2C1-224ENST00000533801 CCDC188H7C350 402 aa17.04■□□□□ 0.32
ATP2C1-224ENST00000533801 ARIH2O95376 493 aa17.04■□□□□ 0.32
ATP2C1-224ENST00000533801 NR1D1P20393 614 aa17.04■□□□□ 0.32
ATP2C1-224ENST00000533801 NFIL3Q16649 462 aa17.04■□□□□ 0.32
ATP2C1-224ENST00000533801 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.04■□□□□ 0.32
ATP2C1-224ENST00000533801 WHAMMQ8TF30 809 aa17.04■□□□□ 0.32
ATP2C1-224ENST00000533801 HAPLN2Q9GZV7 340 aa17.04■□□□□ 0.32
ATP2C1-224ENST00000533801 TXNRD2Q9NNW7 524 aa17.04■□□□□ 0.32
ATP2C1-224ENST00000533801 ADAM22Q9P0K1 906 aa17.04■□□□□ 0.32
ATP2C1-224ENST00000533801 STXBP5LQ9Y2K9 1186 aa17.04■□□□□ 0.32
ATP2C1-224ENST00000533801 SOWAHBA6NEL2 793 aa17.03■□□□□ 0.32
ATP2C1-224ENST00000533801 NOP14P78316 857 aaKnown RBP17.03■□□□□ 0.32
ATP2C1-224ENST00000533801 SGO2Q562F6 1265 aa17.03■□□□□ 0.32
ATP2C1-224ENST00000533801 OLIG1Q8TAK6 271 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms