RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 RNF149Q8NC42 400 aa18.3■□□□□ 0.52
ARHGEF28-212ENST00000513042 OR9Q1Q8NGQ5 310 aa18.3■□□□□ 0.52
ARHGEF28-212ENST00000513042 HIC1Q14526 733 aa18.3■□□□□ 0.52
ARHGEF28-212ENST00000513042 SPDYAQ5MJ70 313 aa18.3■□□□□ 0.52
ARHGEF28-212ENST00000513042 MARCOQ9UEW3 520 aaPredicted RBP18.3■□□□□ 0.52
ARHGEF28-212ENST00000513042 IRF1P10914 325 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 GFAPP14136 432 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 KRT72Q14CN4 511 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 SH2D3CQ8N5H7 860 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 CLCA2Q9UQC9 943 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 HDAC4P56524 1084 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 VSNL1P62760 191 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 DMC1Q14565 340 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 SPATA21Q7Z572 469 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 SRBD1Q8N5C6 995 aaKnown RBP18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 SPDYE5A6NIY4 337 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 IL10P22301 178 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 ACOT2P49753 483 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 DHX34Q14147 1143 aaKnown RBP18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 NBPF9Q3BBW0 867 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 SPDYE7PQ495Y7 208 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 RARS2Q5T160 578 aaKnown RBP18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 TMEM143Q96AN5 459 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 LZTS1Q9Y250 596 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 SPATA31E1Q6ZUB1 1445 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 TLR2O60603 784 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 CCDC22O60826 627 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 GGPS1O95749 300 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 ABHD8Q96I13 439 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 ACAD9Q9H845 621 aa18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 PIN4Q9Y237 131 aaKnown RBP18.29■□□□□ 0.52
ARHGEF28-212ENST00000513042 PRKCBP05771 671 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 VCAM1P19320 739 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 FRMD5Q7Z6J6 570 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 HSPBP1Q9NZL4 362 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 XPO7Q9UIA9 1087 aaKnown RBP18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 POLRMTO00411 1230 aaKnown RBP18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 ARHGEF9O43307 516 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 RALAP11233 206 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 METTL16Q86W50 562 aaKnown RBP18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 SPATA4Q8NEY3 305 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 YIPF2Q9BWQ6 316 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 ZFATQ9P243 1243 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 FAM205CA6NFA0 338 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 ATP2C1P98194 919 aaPredicted RBP18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 DUOXA2Q1HG44 320 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 SPATA2LQ8IUW3 424 aaPredicted RBP18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 IRX2Q9BZI1 471 aaPredicted RBP18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 KLC4Q9NSK0 619 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 FARP1Q9Y4F1 1045 aaPredicted RBP18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 CYP27B1O15528 508 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 RANBP1P43487 201 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 RRM2BQ7LG56 351 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 MCEEQ96PE7 176 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 TRIM54Q9BYV2 358 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 TJP2Q9UDY2 1190 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 PDAP1Q13442 181 aaKnown RBP18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 OR2W6PQ8NHA6 318 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 TMEM117Q9H0C3 514 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 SENP1Q9P0U3 644 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 ZNF229Q9UJW7 825 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 TSPOAP1O95153 1857 aa18.28■□□□□ 0.52
ARHGEF28-212ENST00000513042 MYO1GB0I1T2 1018 aa18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 ANGPT2O15123 496 aa18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 ZFXP17010 805 aaPredicted RBP18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 TRIM72Q6ZMU5 477 aa18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 C4orf33Q8N1A6 199 aa18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 CHP1Q99653 195 aa18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 ASMTLO95671 621 aa18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 PCSK7Q16549 785 aa18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 PATL1Q86TB9 770 aaKnown RBP18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 ZNF711Q9Y462 761 aa18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 HMOX2P30519 316 aa18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 COPB2P35606 906 aa18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 CDK17Q00537 523 aa18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 PCMTD2Q9NV79 361 aa18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 FBXO2Q9UK22 296 aaPredicted RBP18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 WDR19Q8NEZ3 1342 aa18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 KRT4P19013 534 aa18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 SYTL3Q4VX76 610 aa18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 CLEC4GQ6UXB4 293 aa18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 SMIM5Q71RC9 77 aa18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 GUF1Q8N442 669 aaKnown RBP18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 ZNF513Q8N8E2 541 aaPredicted RBP18.27■□□□□ 0.52
ARHGEF28-212ENST00000513042 PCYT1AP49585 367 aa18.27■□□□□ 0.51
ARHGEF28-212ENST00000513042 MTMR2Q13614 643 aa18.27■□□□□ 0.51
ARHGEF28-212ENST00000513042 GRAP2O75791 330 aa18.26■□□□□ 0.51
ARHGEF28-212ENST00000513042 FMR1Q06787 632 aaKnown RBP eCLIP18.26■□□□□ 0.51
ARHGEF28-212ENST00000513042 TMEM62Q0P6H9 643 aa18.26■□□□□ 0.51
ARHGEF28-212ENST00000513042 ICE2Q659A1 982 aa18.26■□□□□ 0.51
ARHGEF28-212ENST00000513042 NBPF10Q6P3W6 841 aaKnown RBP18.26■□□□□ 0.51
ARHGEF28-212ENST00000513042 LDHDQ86WU2 507 aa18.26■□□□□ 0.51
ARHGEF28-212ENST00000513042 OR6J1Q8NGC5 347 aa18.26■□□□□ 0.51
ARHGEF28-212ENST00000513042 DYRK4Q9NR20 520 aa18.26■□□□□ 0.51
ARHGEF28-212ENST00000513042 CEP170Q5SW79 1584 aa18.26■□□□□ 0.51
ARHGEF28-212ENST00000513042 MYBP10242 640 aa18.26■□□□□ 0.51
ARHGEF28-212ENST00000513042 KLK7P49862 253 aa18.26■□□□□ 0.51
ARHGEF28-212ENST00000513042 TAP1Q03518 808 aa18.26■□□□□ 0.51
ARHGEF28-212ENST00000513042 BTNL9Q6UXG8 535 aa18.26■□□□□ 0.51
ARHGEF28-212ENST00000513042 CYGBQ8WWM9 190 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms