RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 TMEM161BQ8NDZ6 487 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 BSNDQ8WZ55 320 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 SGSM3Q96HU1 749 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 KDM4CQ9H3R0 1056 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 RAVER2Q9HCJ3 691 aaKnown RBP13.93□□□□□ -0.18
PTPN7-217ENST00000495688 TPX2Q9ULW0 747 aaKnown RBP13.93□□□□□ -0.18
PTPN7-217ENST00000495688 TBX20Q9UMR3 447 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 DENND3A2RUS2 1198 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 CHUKO15111 745 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 C21orf2O43822 256 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 SSTR3P32745 418 aaPredicted RBP13.93□□□□□ -0.18
PTPN7-217ENST00000495688 PTGER2P43116 358 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 NCKAP1LP55160 1127 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 ADCY1Q08828 1119 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 TNIP1Q15025 636 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 DLGAP5Q15398 846 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 FAM133BQ5BKY9 247 aaKnown RBP13.93□□□□□ -0.18
PTPN7-217ENST00000495688 LMBRD2Q68DH5 695 aaPredicted RBP13.93□□□□□ -0.18
PTPN7-217ENST00000495688 SV2AQ7L0J3 742 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 GPATCH11Q8N954 259 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 C7orf43Q8WVR3 580 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 CPA5Q8WXQ8 436 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 SCLT1Q96NL6 688 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 HEMGNQ9BXL5 484 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 LRRC19Q9H756 370 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 ABCF3Q9NUQ8 709 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 RAB20Q9NX57 234 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.93□□□□□ -0.18
PTPN7-217ENST00000495688 TELO2Q9Y4R8 837 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 UBIAD1Q9Y5Z9 338 aa13.93□□□□□ -0.18
PTPN7-217ENST00000495688 KYNUQ16719 465 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 ZNF568Q3ZCX4 644 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 CYFIP1Q7L576 1253 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 CEP57Q86XR8 500 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 FBXL13Q8NEE6 735 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 TMEM174Q8WUU8 243 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 NT5C1BQ96P26 610 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 ZNF341Q9BYN7 854 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 TAOK3Q9H2K8 898 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 R3HDM2Q9Y2K5 976 aaKnown RBP13.92□□□□□ -0.18
PTPN7-217ENST00000495688 FSCN2O14926 492 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 ASAP2O43150 1006 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 GH1P01241 217 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 MAPK4P31152 587 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 GBP1P32455 592 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 GPC3P51654 580 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 XRCC4Q13426 336 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 ACAD10Q6JQN1 1059 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 ANO5Q75V66 913 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 PRUNE1Q86TP1 453 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 TAX1BP1Q86VP1 789 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 ANKS4BQ8N8V4 417 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 SYTL5Q8TDW5 730 aaPredicted RBP13.92□□□□□ -0.18
PTPN7-217ENST00000495688 MORC4Q8TE76 937 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 ARHGEF2Q92974 986 aaKnown RBP13.92□□□□□ -0.18
PTPN7-217ENST00000495688 VTI1AQ96AJ9 217 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 TMEM109Q9BVC6 243 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 TMEM8AQ9HCN3 771 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 UVRAGQ9P2Y5 699 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 ADGRA3Q8IWK6 1321 aa13.92□□□□□ -0.18
PTPN7-217ENST00000495688 COL2A1P02458 1487 aaPredicted RBP13.91□□□□□ -0.18
PTPN7-217ENST00000495688 TMEM120BA0PK00 339 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 RRM1P23921 792 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 IVDP26440 423 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 RPS6P62753 249 aaKnown RBP13.91□□□□□ -0.18
PTPN7-217ENST00000495688 SNCBQ16143 134 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 HIBCHQ6NVY1 386 aaPredicted RBP13.91□□□□□ -0.18
PTPN7-217ENST00000495688 SEPT14Q6ZU15 432 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 C12orf50Q8NA57 414 aaPredicted RBP13.91□□□□□ -0.18
PTPN7-217ENST00000495688 ST6GALNAC4Q9H4F1 302 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 SAMD15Q9P1V8 674 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 COQ4Q9Y3A0 265 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 BRWD3Q6RI45 1802 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 MROH7Q68CQ1 1323 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 TESPA1A2RU30 521 aaPredicted RBP13.91□□□□□ -0.18
PTPN7-217ENST00000495688 CFHP08603 1231 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 SCP2P22307 547 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 ITGA8P53708 1063 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 MPP2Q14168 576 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 E2F5Q15329 346 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 PCNX4Q63HM2 1172 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 STYK1Q6J9G0 422 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 CCDC91Q7Z6B0 441 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 ANKRD42Q8N9B4 389 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 POMGNT1Q8WZA1 660 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 FGFR1OP2Q9NVK5 253 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 TBK1Q9UHD2 729 aa13.91□□□□□ -0.18
PTPN7-217ENST00000495688 MAPK13O15264 365 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 PLA2G6O60733 806 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 CLEC16AQ2KHT3 1053 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 MFSD5Q6N075 450 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 RHBDF2Q6PJF5 856 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 VSTM1Q6UX27 236 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 MAP4K3Q8IVH8 894 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 TEX2Q8IWB9 1127 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 DYDC1Q8WWB3 177 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 NCAPGQ9BPX3 1015 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 DEFB129Q9H1M3 183 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 AGAP1Q9UPQ3 857 aa13.9□□□□□ -0.18
PTPN7-217ENST00000495688 TCP11X1B4DZS4 312 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 183 ms