RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 RPL13P26373 211 aaKnown RBP21.08■□□□□ 0.97
PCOLCE-208ENST00000487172 SCNN1GP51170 649 aa21.08■□□□□ 0.97
PCOLCE-208ENST00000487172 GRIK3Q13003 919 aa21.08■□□□□ 0.97
PCOLCE-208ENST00000487172 ZSWIM2Q8NEG5 633 aa21.08■□□□□ 0.97
PCOLCE-208ENST00000487172 ASB7Q9H672 318 aa21.08■□□□□ 0.97
PCOLCE-208ENST00000487172 CWH43Q9H720 699 aa21.08■□□□□ 0.97
PCOLCE-208ENST00000487172 INPP5FQ9Y2H2 1132 aa21.08■□□□□ 0.97
PCOLCE-208ENST00000487172 TRIP11Q15643 1979 aa21.08■□□□□ 0.96
PCOLCE-208ENST00000487172 TDRD15B5MCY1 1934 aaKnown RBP21.08■□□□□ 0.96
PCOLCE-208ENST00000487172 RALGAPA2Q2PPJ7 1873 aa21.07■□□□□ 0.96
PCOLCE-208ENST00000487172 LINC01553A4QN01 128 aa21.07■□□□□ 0.96
PCOLCE-208ENST00000487172 GOLGA8IPA6NC78 632 aa21.07■□□□□ 0.96
PCOLCE-208ENST00000487172 GOLGA8JA6NMD2 632 aa21.07■□□□□ 0.96
PCOLCE-208ENST00000487172 MAPK13O15264 365 aa21.07■□□□□ 0.96
PCOLCE-208ENST00000487172 THP07101 528 aa21.07■□□□□ 0.96
PCOLCE-208ENST00000487172 LINC00271P0C7V0 271 aa21.07■□□□□ 0.96
PCOLCE-208ENST00000487172 CYP2J2P51589 502 aa21.07■□□□□ 0.96
PCOLCE-208ENST00000487172 PPP2R3AQ06190 1150 aa21.07■□□□□ 0.96
PCOLCE-208ENST00000487172 HABP4Q5JVS0 413 aaKnown RBP21.07■□□□□ 0.96
PCOLCE-208ENST00000487172 ANKRD40Q6AI12 368 aa21.07■□□□□ 0.96
PCOLCE-208ENST00000487172 SASS6Q6UVJ0 657 aa21.07■□□□□ 0.96
PCOLCE-208ENST00000487172 BRSK2Q8IWQ3 736 aa21.07■□□□□ 0.96
PCOLCE-208ENST00000487172 ZC3H3Q8IXZ2 948 aaKnown RBP21.07■□□□□ 0.96
PCOLCE-208ENST00000487172 TIFAQ96CG3 184 aa21.07■□□□□ 0.96
PCOLCE-208ENST00000487172 CXCL16Q9H2A7 254 aa21.07■□□□□ 0.96
PCOLCE-208ENST00000487172 NKX2-4Q9H2Z4 354 aa21.07■□□□□ 0.96
PCOLCE-208ENST00000487172 DACH1Q9UI36 760 aa21.07■□□□□ 0.96
PCOLCE-208ENST00000487172 RWDD3Q9Y3V2 267 aa21.07■□□□□ 0.96
PCOLCE-208ENST00000487172 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.07■□□□□ 0.96
PCOLCE-208ENST00000487172 MRPL42Q9Y6G3 142 aaKnown RBP21.07■□□□□ 0.96
PCOLCE-208ENST00000487172 TMEM265A0A087WTH1 108 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 SMIM28A0A1B0GU29 152 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 BICDL2A1A5D9 508 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 CARNS1A5YM72 827 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 LACTBL1A8MY62 500 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 EXOC3O60645 756 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 IL18RAPO95256 599 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 NR2F2P24468 414 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 PMS1P54277 932 aaKnown RBP21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 FKBP3Q00688 224 aaKnown RBP21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 TAP1Q03518 808 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 DSC1Q08554 894 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 PAK1Q13153 545 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 ADAM9Q13443 819 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 SURF1Q15526 300 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 NAB2Q15742 525 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 KLHL10Q6JEL2 608 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 NT5DC4Q86YG4 428 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 CBWD2Q8IUF1 395 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 NELFBQ8WX92 580 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 SAMD11Q96NU1 681 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 PPP1R10Q96QC0 940 aaKnown RBP21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 NRDE2Q9H7Z3 1164 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 SLC28A3Q9HAS3 691 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 DERAQ9Y315 318 aa21.06■□□□□ 0.96
PCOLCE-208ENST00000487172 ANK1P16157 1881 aa21.05■□□□□ 0.96
PCOLCE-208ENST00000487172 DDHD2O94830 711 aa21.05■□□□□ 0.96
PCOLCE-208ENST00000487172 RNASELQ05823 741 aaKnown RBP21.05■□□□□ 0.96
PCOLCE-208ENST00000487172 ZBTB6Q15916 424 aa21.05■□□□□ 0.96
PCOLCE-208ENST00000487172 SNRNP35Q16560 246 aaKnown RBP21.05■□□□□ 0.96
PCOLCE-208ENST00000487172 DPCR1Q3MIW9 517 aa21.05■□□□□ 0.96
PCOLCE-208ENST00000487172 TTI2Q6NXR4 508 aa21.05■□□□□ 0.96
PCOLCE-208ENST00000487172 ZNF280BQ86YH2 543 aa21.05■□□□□ 0.96
PCOLCE-208ENST00000487172 MFSD14AQ96MC6 490 aa21.05■□□□□ 0.96
PCOLCE-208ENST00000487172 ZMAT2Q96NC0 199 aaKnown RBP21.05■□□□□ 0.96
PCOLCE-208ENST00000487172 FAM193BQ96PV7 902 aaPredicted RBP21.05■□□□□ 0.96
PCOLCE-208ENST00000487172 TMEM175Q9BSA9 504 aa21.05■□□□□ 0.96
PCOLCE-208ENST00000487172 SLC38A7Q9NVC3 462 aa21.05■□□□□ 0.96
PCOLCE-208ENST00000487172 RBAKQ9NYW8 714 aaPredicted RBP21.05■□□□□ 0.96
PCOLCE-208ENST00000487172 RWDD2AQ9UIY3 292 aa21.05■□□□□ 0.96
PCOLCE-208ENST00000487172 PLAGL2Q9UPG8 496 aa21.05■□□□□ 0.96
PCOLCE-208ENST00000487172 PDCD11Q14690 1871 aaKnown RBP21.05■□□□□ 0.96
PCOLCE-208ENST00000487172 TRIM49BA6NDI0 452 aa21.04■□□□□ 0.96
PCOLCE-208ENST00000487172 CETN3O15182 167 aa21.04■□□□□ 0.96
PCOLCE-208ENST00000487172 ARHGEF15O94989 841 aa21.04■□□□□ 0.96
PCOLCE-208ENST00000487172 LAG3P18627 525 aa21.04■□□□□ 0.96
PCOLCE-208ENST00000487172 ERCC5P28715 1186 aaPredicted RBP21.04■□□□□ 0.96
PCOLCE-208ENST00000487172 ERVK-21P61565 698 aa21.04■□□□□ 0.96
PCOLCE-208ENST00000487172 COLGALT2Q8IYK4 626 aa21.04■□□□□ 0.96
PCOLCE-208ENST00000487172 RDH13Q8NBN7 331 aa21.04■□□□□ 0.96
PCOLCE-208ENST00000487172 TGS1Q96RS0 853 aaKnown RBP21.04■□□□□ 0.96
PCOLCE-208ENST00000487172 MKNK1Q9BUB5 465 aa21.04■□□□□ 0.96
PCOLCE-208ENST00000487172 AAASQ9NRG9 546 aa21.04■□□□□ 0.96
PCOLCE-208ENST00000487172 ANO10Q9NW15 660 aa21.04■□□□□ 0.96
PCOLCE-208ENST00000487172 CTNND2Q9UQB3 1225 aa21.04■□□□□ 0.96
PCOLCE-208ENST00000487172 FRMD4BQ9Y2L6 1034 aa21.04■□□□□ 0.96
PCOLCE-208ENST00000487172 C2CD2Q9Y426 696 aa21.04■□□□□ 0.96
PCOLCE-208ENST00000487172 SOX1O00570 391 aaPredicted RBP21.03■□□□□ 0.96
PCOLCE-208ENST00000487172 XPOTO43592 962 aaKnown RBP21.03■□□□□ 0.96
PCOLCE-208ENST00000487172 CYP3A5P20815 502 aa21.03■□□□□ 0.96
PCOLCE-208ENST00000487172 BMPR1AP36894 532 aa21.03■□□□□ 0.96
PCOLCE-208ENST00000487172 CASP4P49662 377 aa21.03■□□□□ 0.96
PCOLCE-208ENST00000487172 MCCD1P59942 119 aaPredicted RBP21.03■□□□□ 0.96
PCOLCE-208ENST00000487172 TUSC3Q13454 348 aa21.03■□□□□ 0.96
PCOLCE-208ENST00000487172 STX1AQ16623 288 aa21.03■□□□□ 0.96
PCOLCE-208ENST00000487172 GLRA4Q5JXX5 417 aa21.03■□□□□ 0.96
PCOLCE-208ENST00000487172 PPP2R2DQ66LE6 453 aa21.03■□□□□ 0.96
PCOLCE-208ENST00000487172 GPR153Q6NV75 609 aa21.03■□□□□ 0.96
PCOLCE-208ENST00000487172 NOC3LQ8WTT2 800 aaKnown RBP21.03■□□□□ 0.96
PCOLCE-208ENST00000487172 FAM212AQ96EL1 285 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms