RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 TMEM143Q96AN5 459 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 MCRS1Q96EZ8 462 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 MTRQ99707 1265 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 CLSTN3Q9BQT9 956 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 TRMT61BQ9BVS5 477 aaKnown RBP8.51□□□□□ -1.05
PDPN-205ENST00000487038 DHX33Q9H6R0 707 aaKnown RBP8.51□□□□□ -1.05
PDPN-205ENST00000487038 MINDY3Q9H8M7 445 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 LMAN1LQ9HAT1 526 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 MIOSQ9NXC5 875 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 RALYQ9UKM9 306 aaKnown RBP8.51□□□□□ -1.05
PDPN-205ENST00000487038 HES2Q9Y543 173 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 EML5Q05BV3 1969 aa8.51□□□□□ -1.05
PDPN-205ENST00000487038 ASH1LQ9NR48 2969 aaKnown RBP8.51□□□□□ -1.05
PDPN-205ENST00000487038 IGSF10Q6WRI0 2623 aa8.5□□□□□ -1.05
PDPN-205ENST00000487038 TRIP11Q15643 1979 aa8.5□□□□□ -1.05
PDPN-205ENST00000487038 STBD1O95210 358 aa8.5□□□□□ -1.05
PDPN-205ENST00000487038 PTPN2P17706 415 aa8.5□□□□□ -1.05
PDPN-205ENST00000487038 GRM2Q14416 872 aa8.5□□□□□ -1.05
PDPN-205ENST00000487038 NECTIN1Q15223 517 aa8.5□□□□□ -1.05
PDPN-205ENST00000487038 MOXD1Q6UVY6 613 aa8.5□□□□□ -1.05
PDPN-205ENST00000487038 B3GNT9Q6UX72 402 aa8.5□□□□□ -1.05
PDPN-205ENST00000487038 UNQ6494/PRO21346Q6UXR6 183 aa8.5□□□□□ -1.05
PDPN-205ENST00000487038 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.5□□□□□ -1.05
PDPN-205ENST00000487038 DHX32Q7L7V1 743 aaKnown RBP8.5□□□□□ -1.05
PDPN-205ENST00000487038 SPEM1Q8N4L4 309 aa8.5□□□□□ -1.05
PDPN-205ENST00000487038 LNX1Q8TBB1 728 aaPredicted RBP8.5□□□□□ -1.05
PDPN-205ENST00000487038 TBCKQ8TEA7 893 aa8.5□□□□□ -1.05
PDPN-205ENST00000487038 DEPDC1BQ8WUY9 529 aa8.5□□□□□ -1.05
PDPN-205ENST00000487038 CPB2Q96IY4 423 aa8.5□□□□□ -1.05
PDPN-205ENST00000487038 CCDC43Q96MW1 224 aaKnown RBP8.5□□□□□ -1.05
PDPN-205ENST00000487038 LSG1Q9H089 658 aaKnown RBP8.5□□□□□ -1.05
PDPN-205ENST00000487038 SLKQ9H2G2 1235 aaPredicted RBP8.5□□□□□ -1.05
PDPN-205ENST00000487038 RNF39Q9H2S5 420 aa8.5□□□□□ -1.05
PDPN-205ENST00000487038 NXF3Q9H4D5 531 aaKnown RBP8.5□□□□□ -1.05
PDPN-205ENST00000487038 ZFP14Q9HCL3 533 aa8.5□□□□□ -1.05
PDPN-205ENST00000487038 ANO2Q9NQ90 1003 aa8.5□□□□□ -1.05
PDPN-205ENST00000487038 TRPV5Q9NQA5 729 aa8.5□□□□□ -1.05
PDPN-205ENST00000487038 AVENQ9NQS1 362 aaPredicted RBP8.5□□□□□ -1.05
PDPN-205ENST00000487038 BMP2KQ9NSY1 1161 aaPredicted RBP8.5□□□□□ -1.05
PDPN-205ENST00000487038 HCFC1R1Q9NWW0 138 aa8.5□□□□□ -1.05
PDPN-205ENST00000487038 DNMT3BQ9UBC3 853 aaKnown RBP8.5□□□□□ -1.05
PDPN-205ENST00000487038 PARP2Q9UGN5 583 aa8.5□□□□□ -1.05
PDPN-205ENST00000487038 BRPF3Q9ULD4 1205 aa8.5□□□□□ -1.05
PDPN-205ENST00000487038 PIAS3Q9Y6X2 628 aa8.5□□□□□ -1.05
PDPN-205ENST00000487038 NID2Q14112 1375 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 TMEM8BA6NDV4 472 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 CASTOR2A6NHX0 329 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 CHURC1-FNTBB4DL54 471 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 ZNF197O14709 1029 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 PRPF3O43395 683 aaKnown RBP8.49□□□□□ -1.05
PDPN-205ENST00000487038 KIF4AO95239 1232 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 PAPSS2O95340 614 aaPredicted RBP8.49□□□□□ -1.05
PDPN-205ENST00000487038 NPTXRO95502 500 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 P4HBP07237 508 aaKnown RBP8.49□□□□□ -1.05
PDPN-205ENST00000487038 RHOP08100 348 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 HMGB1P09429 215 aaKnown RBP8.49□□□□□ -1.05
PDPN-205ENST00000487038 PSMC3P17980 439 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 AKAP5P24588 427 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 YWHABP31946 246 aaKnown RBP8.49□□□□□ -1.05
PDPN-205ENST00000487038 ELF1P32519 619 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 OR1D2P34982 312 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 FNTBP49356 437 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 NPEPPSP55786 919 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 PTENP60484 403 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 SATB1Q01826 763 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 POU5F1BQ06416 359 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 SPIRE1Q08AE8 756 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 RAB33AQ14088 237 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 KRT32Q14532 448 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 TANGO2Q6ICL3 276 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 PPP4R3AQ6IN85 833 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 PDZD4Q76G19 769 aaPredicted RBP8.49□□□□□ -1.05
PDPN-205ENST00000487038 ELMOD1Q8N336 334 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 FAM160A2Q8N612 972 aaPredicted RBP8.49□□□□□ -1.05
PDPN-205ENST00000487038 GSTCDQ8NEC7 633 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 CSGALNACT1Q8TDX6 532 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 GJA10Q969M2 543 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 LOXL4Q96JB6 756 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 RNF26Q9BY78 433 aaPredicted RBP8.49□□□□□ -1.05
PDPN-205ENST00000487038 PLA2G2FQ9BZM2 168 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 ZNF334Q9HCZ1 680 aaPredicted RBP8.49□□□□□ -1.05
PDPN-205ENST00000487038 ZMIZ1Q9ULJ6 1067 aa8.49□□□□□ -1.05
PDPN-205ENST00000487038 CITO14578 2027 aa8.48□□□□□ -1.05
PDPN-205ENST00000487038 CYP3A7-CYP3A51PA0A087WV96 503 aa8.48□□□□□ -1.05
PDPN-205ENST00000487038 PRRG1O14668 218 aa8.48□□□□□ -1.05
PDPN-205ENST00000487038 ZNF263O14978 683 aa8.48□□□□□ -1.05
PDPN-205ENST00000487038 ADAMTS3O15072 1205 aa8.48□□□□□ -1.05
PDPN-205ENST00000487038 MICAL2O94851 1124 aa8.48□□□□□ -1.05
PDPN-205ENST00000487038 TDP2O95551 362 aa8.48□□□□□ -1.05
PDPN-205ENST00000487038 THP07101 528 aa8.48□□□□□ -1.05
PDPN-205ENST00000487038 ZNF806P0C7X5 589 aa8.48□□□□□ -1.05
PDPN-205ENST00000487038 CEBPBP17676 345 aa8.48□□□□□ -1.05
PDPN-205ENST00000487038 ARF4P18085 180 aaPredicted RBP8.48□□□□□ -1.05
PDPN-205ENST00000487038 CYP3A7P24462 503 aa8.48□□□□□ -1.05
PDPN-205ENST00000487038 GDI1P31150 447 aa8.48□□□□□ -1.05
PDPN-205ENST00000487038 ADD1P35611 737 aaKnown RBP8.48□□□□□ -1.05
PDPN-205ENST00000487038 MLLT6P55198 1093 aaPredicted RBP8.48□□□□□ -1.05
PDPN-205ENST00000487038 NLRP5P59047 1200 aa8.48□□□□□ -1.05
PDPN-205ENST00000487038 MBTD1Q05BQ5 628 aa8.48□□□□□ -1.05
PDPN-205ENST00000487038 PTGDRQ13258 359 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms