RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 TGFB3P10600 412 aa14.64□□□□□ -0.07
BRAT1-203ENST00000467558 CA4P22748 312 aa14.64□□□□□ -0.07
BRAT1-203ENST00000467558 SCN4BQ8IWT1 228 aa14.64□□□□□ -0.07
BRAT1-203ENST00000467558 URGCPQ8TCY9 931 aa14.64□□□□□ -0.07
BRAT1-203ENST00000467558 TTC25Q96NG3 672 aa14.64□□□□□ -0.07
BRAT1-203ENST00000467558 NUDT12Q9BQG2 462 aa14.64□□□□□ -0.07
BRAT1-203ENST00000467558 SPATC1LQ9H0A9 340 aa14.64□□□□□ -0.07
BRAT1-203ENST00000467558 A0A087X0T9 212 aa14.64□□□□□ -0.07
BRAT1-203ENST00000467558 FAM228BP0C875 321 aa14.64□□□□□ -0.07
BRAT1-203ENST00000467558 ADORA2BP29275 332 aa14.64□□□□□ -0.07
BRAT1-203ENST00000467558 SLC26A2P50443 739 aa14.64□□□□□ -0.07
BRAT1-203ENST00000467558 SLC5A5Q92911 643 aa14.64□□□□□ -0.07
BRAT1-203ENST00000467558 CBWD1Q9BRT8 395 aa14.64□□□□□ -0.07
BRAT1-203ENST00000467558 IQANK1A0A1B0GTG1 560 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 SLITRK3O94933 977 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 GGCXP38435 758 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 PMS2P54278 862 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 CBWD2Q8IUF1 395 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 SENP7Q9BQF6 1050 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 CAPN7Q9Y6W3 813 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 OGTO15294 1046 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 PLEKP08567 350 aaPredicted RBP14.63□□□□□ -0.07
BRAT1-203ENST00000467558 CLTAP09496 248 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 RARRES1P49788 294 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 ZKSCAN8Q15776 578 aaPredicted RBP14.63□□□□□ -0.07
BRAT1-203ENST00000467558 RWDD4Q6NW29 188 aaKnown RBP14.63□□□□□ -0.07
BRAT1-203ENST00000467558 RAPH1Q70E73 1250 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 GOLGA8CPA6NN73 597 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 KRT37O76014 449 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 PMS1P54277 932 aaKnown RBP14.63□□□□□ -0.07
BRAT1-203ENST00000467558 MMS22LQ6ZRQ5 1243 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 ATL2Q8NHH9 583 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 C1orf54Q8WWF1 131 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 RANBP17Q9H2T7 1088 aaKnown RBP14.63□□□□□ -0.07
BRAT1-203ENST00000467558 TTC7AQ9ULT0 858 aaPredicted RBP14.63□□□□□ -0.07
BRAT1-203ENST00000467558 TRAF3IP3Q9Y228 551 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 AFG3L2Q9Y4W6 797 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 GTPBP10A4D1E9 387 aaKnown RBP14.63□□□□□ -0.07
BRAT1-203ENST00000467558 SSTR3P32745 418 aaPredicted RBP14.63□□□□□ -0.07
BRAT1-203ENST00000467558 CDH6P55285 790 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 GJB7Q6PEY0 223 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 MS4A14Q96JA4 679 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 PRKAG2Q9UGJ0 569 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 ALG6Q9Y672 507 aa14.63□□□□□ -0.07
BRAT1-203ENST00000467558 CD4P01730 458 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 MAPTP10636 758 aaKnown RBP14.62□□□□□ -0.07
BRAT1-203ENST00000467558 TAL1P17542 331 aaPredicted RBP14.62□□□□□ -0.07
BRAT1-203ENST00000467558 GTF2H1P32780 548 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 MDM2Q00987 491 aaPredicted RBP14.62□□□□□ -0.07
BRAT1-203ENST00000467558 FUT2Q10981 343 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 IFT88Q13099 833 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 EFCAB13Q8IY85 973 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 RSRC1Q96IZ7 334 aaKnown RBP14.62□□□□□ -0.07
BRAT1-203ENST00000467558 BAIAP2L1Q9UHR4 511 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 TLK1Q9UKI8 766 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 CHD2O14647 1828 aaKnown RBP14.62□□□□□ -0.07
BRAT1-203ENST00000467558 KRT14P02533 472 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 PGK2P07205 417 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 HERVK_113P62684 666 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 NR1H3Q13133 447 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 ZNF484Q5JVG2 852 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 METTL7BQ6UX53 244 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 PLCD3Q8N3E9 789 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 ZNF507Q8TCN5 953 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 PRPF31Q8WWY3 499 aaKnown RBP14.62□□□□□ -0.07
BRAT1-203ENST00000467558 PI4K2AQ9BTU6 479 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 KLHL8Q9P2G9 620 aaPredicted RBP14.62□□□□□ -0.07
BRAT1-203ENST00000467558 FOXN3O00409 490 aaPredicted RBP14.62□□□□□ -0.07
BRAT1-203ENST00000467558 TBC1D12O60347 775 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 TOM1L1O75674 476 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 NLRP11P59045 1033 aaKnown RBP14.62□□□□□ -0.07
BRAT1-203ENST00000467558 GPS1Q13098 491 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 RPS6KA2Q15349 733 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 RCOR2Q8IZ40 523 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 TMC2Q8TDI7 906 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 SNF8Q96H20 258 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 L2HGDHQ9H9P8 463 aa14.62□□□□□ -0.07
BRAT1-203ENST00000467558 COG7P83436 770 aa14.61□□□□□ -0.07
BRAT1-203ENST00000467558 PIGHQ14442 188 aaPredicted RBP14.61□□□□□ -0.07
BRAT1-203ENST00000467558 EFHC2Q5JST6 749 aa14.61□□□□□ -0.07
BRAT1-203ENST00000467558 RAB3IPQ96QF0 476 aaPredicted RBP14.61□□□□□ -0.07
BRAT1-203ENST00000467558 DHX35Q9H5Z1 703 aaKnown RBP14.61□□□□□ -0.07
BRAT1-203ENST00000467558 GTF3C4Q9UKN8 822 aa14.61□□□□□ -0.07
BRAT1-203ENST00000467558 FOXP2O15409 715 aa14.61□□□□□ -0.07
BRAT1-203ENST00000467558 ZC3H11AO75152 810 aaKnown RBP eCLIP14.61□□□□□ -0.07
BRAT1-203ENST00000467558 RARBP10826 455 aa14.61□□□□□ -0.07
BRAT1-203ENST00000467558 ZFXP17010 805 aaPredicted RBP14.61□□□□□ -0.07
BRAT1-203ENST00000467558 EVX2Q03828 476 aa14.61□□□□□ -0.07
BRAT1-203ENST00000467558 THOC5Q13769 683 aaKnown RBP14.61□□□□□ -0.07
BRAT1-203ENST00000467558 APPL2Q8NEU8 664 aa14.61□□□□□ -0.07
BRAT1-203ENST00000467558 CFAP36Q96G28 342 aa14.61□□□□□ -0.07
BRAT1-203ENST00000467558 TRIM62Q9BVG3 475 aa14.61□□□□□ -0.07
BRAT1-203ENST00000467558 NT5C1AQ9BXI3 368 aa14.61□□□□□ -0.07
BRAT1-203ENST00000467558 GTF2A1P52655 376 aaPredicted RBP14.61□□□□□ -0.07
BRAT1-203ENST00000467558 KIAA1755Q5JYT7 1200 aa14.61□□□□□ -0.07
BRAT1-203ENST00000467558 HEATR6Q6AI08 1181 aaKnown RBP14.61□□□□□ -0.07
BRAT1-203ENST00000467558 SLC30A10Q6XR72 485 aa14.61□□□□□ -0.07
BRAT1-203ENST00000467558 RAET1EQ8TD07 263 aa14.61□□□□□ -0.07
BRAT1-203ENST00000467558 DUSP9Q99956 384 aaKnown RBP14.61□□□□□ -0.07
BRAT1-203ENST00000467558 PDGFRAP16234 1089 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms