RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 ARHGEF3Q9NR81 526 aa12.55□□□□□ -0.4
PDZRN3-203ENST00000462146 NINJ2Q9NZG7 142 aa12.55□□□□□ -0.4
PDZRN3-203ENST00000462146 PRKAG3Q9UGI9 489 aa12.55□□□□□ -0.4
PDZRN3-203ENST00000462146 UBR3Q6ZT12 1888 aa12.55□□□□□ -0.4
PDZRN3-203ENST00000462146 ARHGEF35A5YM69 484 aa12.55□□□□□ -0.4
PDZRN3-203ENST00000462146 O00370 1275 aa12.55□□□□□ -0.4
PDZRN3-203ENST00000462146 GH2P01242 217 aa12.55□□□□□ -0.4
PDZRN3-203ENST00000462146 CYP1A2P05177 515 aa12.55□□□□□ -0.4
PDZRN3-203ENST00000462146 CHRM1P11229 460 aaPredicted RBP12.55□□□□□ -0.4
PDZRN3-203ENST00000462146 RFX1P22670 979 aa12.55□□□□□ -0.4
PDZRN3-203ENST00000462146 FOXN2P32314 431 aa12.55□□□□□ -0.4
PDZRN3-203ENST00000462146 ECE1P42892 770 aa12.55□□□□□ -0.4
PDZRN3-203ENST00000462146 MSH2P43246 934 aa12.55□□□□□ -0.4
PDZRN3-203ENST00000462146 ABCB5Q2M3G0 1257 aa12.55□□□□□ -0.4
PDZRN3-203ENST00000462146 STXBP4Q6ZWJ1 553 aa12.55□□□□□ -0.4
PDZRN3-203ENST00000462146 BZW1Q7L1Q6 419 aaKnown RBP12.55□□□□□ -0.4
PDZRN3-203ENST00000462146 ECHDC2Q86YB7 292 aa12.55□□□□□ -0.4
PDZRN3-203ENST00000462146 FAM71AQ8IYT1 594 aa12.55□□□□□ -0.4
PDZRN3-203ENST00000462146 ZNF577Q9BSK1 485 aa12.55□□□□□ -0.4
PDZRN3-203ENST00000462146 HSPBP1Q9NZL4 362 aa12.55□□□□□ -0.4
PDZRN3-203ENST00000462146 ARL2BPQ9Y2Y0 163 aa12.55□□□□□ -0.4
PDZRN3-203ENST00000462146 LOXHD1Q8IVV2 1947 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 THAP12O43422 761 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 TTC4O95801 387 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 STX2P32856 288 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 MXI1P50539 228 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 HHIPL2Q6UWX4 724 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 INTS8Q75QN2 995 aaKnown RBP12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 ASRGL1Q7L266 308 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 FMNL3Q8IVF7 1028 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 SPOCK2Q92563 424 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 C9orf72Q96LT7 481 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 TOPORSQ9NS56 1045 aaPredicted RBP12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 NOP53Q9NZM5 478 aaKnown RBP12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 ADAM22Q9P0K1 906 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 WHRNQ9P202 907 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 SCN9AQ15858 1988 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 RNASELQ05823 741 aaKnown RBP12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 TMEM63BQ5T3F8 832 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 PADI6Q6TGC4 694 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 MAB21L3Q8N8X9 362 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 GMCL1P1Q8NEA9 526 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 UTP4Q969X6 686 aaKnown RBP12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 GMCL1Q96IK5 515 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 HEMGNQ9BXL5 484 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 RXFP1Q9HBX9 757 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 PI4KBQ9UBF8 816 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 SUGT1Q9Y2Z0 365 aa12.54□□□□□ -0.4
PDZRN3-203ENST00000462146 ANKRD31Q8N7Z5 1873 aa12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 CCDC189A1A4V9 331 aa12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 PIK3CDO00329 1044 aa12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 FSCN2O14926 492 aa12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 CYP11B1P15538 503 aa12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 HOXA10P31260 410 aaPredicted RBP12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 RBM26Q5T8P6 1007 aaKnown RBP12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 TATDN1Q6P1N9 297 aa12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 TMEM179Q6ZVK1 233 aa12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 CBWD2Q8IUF1 395 aa12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 SLC17A8Q8NDX2 589 aa12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 CCDC127Q96BQ5 260 aa12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 SAAL1Q96ER3 474 aa12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 SNF8Q96H20 258 aa12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 PAIP2Q9BPZ3 127 aaKnown RBP12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 GPRC5CQ9NQ84 441 aa12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 ANAPC7Q9UJX3 599 aa12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 ZBTB21Q9ULJ3 1066 aa12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 NAALADL1Q9UQQ1 740 aa12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 GZMAP12544 262 aa12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 RRM1P23921 792 aa12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 CCHCR1Q8TD31 782 aa12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 TMEM237Q96Q45 408 aa12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 GTF3C4Q9UKN8 822 aa12.53□□□□□ -0.4
PDZRN3-203ENST00000462146 SPAG7O75391 227 aa12.52□□□□□ -0.4
PDZRN3-203ENST00000462146 TAC1P20366 129 aa12.52□□□□□ -0.4
PDZRN3-203ENST00000462146 CETN1Q12798 172 aa12.52□□□□□ -0.4
PDZRN3-203ENST00000462146 CEP55Q53EZ4 464 aa12.52□□□□□ -0.4
PDZRN3-203ENST00000462146 SP8Q8IXZ3 490 aa12.52□□□□□ -0.4
PDZRN3-203ENST00000462146 C7orf43Q8WVR3 580 aa12.52□□□□□ -0.4
PDZRN3-203ENST00000462146 ADAM33Q9BZ11 813 aa12.52□□□□□ -0.4
PDZRN3-203ENST00000462146 SLC5A4Q9NY91 659 aa12.52□□□□□ -0.4
PDZRN3-203ENST00000462146 CCND1P24385 295 aa12.52□□□□□ -0.41
PDZRN3-203ENST00000462146 ADCY8P40145 1251 aa12.52□□□□□ -0.41
PDZRN3-203ENST00000462146 SLC8A3P57103 927 aa12.52□□□□□ -0.41
PDZRN3-203ENST00000462146 PTK6Q13882 451 aa12.52□□□□□ -0.41
PDZRN3-203ENST00000462146 TMED2Q15363 201 aa12.52□□□□□ -0.41
PDZRN3-203ENST00000462146 XXYLT1Q8NBI6 393 aa12.52□□□□□ -0.41
PDZRN3-203ENST00000462146 SHC3Q92529 594 aa12.52□□□□□ -0.41
PDZRN3-203ENST00000462146 TRIM6Q9C030 488 aaPredicted RBP12.52□□□□□ -0.41
PDZRN3-203ENST00000462146 MYLK2Q9H1R3 596 aa12.52□□□□□ -0.41
PDZRN3-203ENST00000462146 KIF9Q9HAQ2 790 aa12.52□□□□□ -0.41
PDZRN3-203ENST00000462146 ETNK1Q9HBU6 452 aa12.52□□□□□ -0.41
PDZRN3-203ENST00000462146 NKX1-2Q9UD57 310 aaPredicted RBP12.52□□□□□ -0.41
PDZRN3-203ENST00000462146 RGS17Q9UGC6 210 aaPredicted RBP12.52□□□□□ -0.41
PDZRN3-203ENST00000462146 ONECUT3O60422 494 aaPredicted RBP12.51□□□□□ -0.41
PDZRN3-203ENST00000462146 UPP2O95045 317 aa12.51□□□□□ -0.41
PDZRN3-203ENST00000462146 ITIH2P19823 946 aa12.51□□□□□ -0.41
PDZRN3-203ENST00000462146 PDE6BP35913 854 aa12.51□□□□□ -0.41
PDZRN3-203ENST00000462146 WDR4P57081 412 aaKnown RBP12.51□□□□□ -0.41
PDZRN3-203ENST00000462146 GRIPAP1Q4V328 841 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms