RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 VPS52Q8N1B4 723 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 ZNF398Q8TD17 642 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 CDK5RAP3Q96JB5 506 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 PYM1Q9BRP8 204 aaKnown RBP11.39□□□□□ -0.59
LINC00342-202ENST00000448494 TUBGCP2Q9BSJ2 902 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 KIAA1257Q9ULG3 409 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 RABGAP1Q9Y3P9 1069 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 NOC2LQ9Y3T9 749 aaKnown RBP11.39□□□□□ -0.59
LINC00342-202ENST00000448494 A0A087X0B3 334 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 C15orf38-AP3S2A0A0A6YYH1 394 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 ALOX15BO15296 676 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 AQP9O43315 295 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 GTPBP6O43824 516 aaPredicted RBP11.38□□□□□ -0.59
LINC00342-202ENST00000448494 S100BP04271 92 aaPredicted RBP11.38□□□□□ -0.59
LINC00342-202ENST00000448494 CDH2P19022 906 aaPredicted RBP11.38□□□□□ -0.59
LINC00342-202ENST00000448494 CASP1P29466 404 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 ARHGAP4P98171 946 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 IL9RQ01113 521 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 KCNJ8Q15842 424 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 DUPD1Q68J44 220 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 GGT6Q6P531 493 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 ELMSAN1Q6PJG2 1045 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 DCLRE1AQ6PJP8 1040 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 USP49Q70CQ1 688 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 MIER3Q7Z3K6 550 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 RIC3Q7Z5B4 369 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 ARPINQ7Z6K5 226 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 ZSCAN29Q8IWY8 852 aaPredicted RBP11.38□□□□□ -0.59
LINC00342-202ENST00000448494 CENPSQ8N2Z9 138 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 RASGEF1CQ8N431 466 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 LZTR1Q8N653 840 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 ENAHQ8N8S7 591 aaPredicted RBP11.38□□□□□ -0.59
LINC00342-202ENST00000448494 C10orf82Q8WW14 230 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 AIFM3Q96NN9 605 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 PALMDQ9NP74 551 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 NKIRAS1Q9NYS0 192 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 IFT52Q9Y366 437 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 DDX60Q8IY21 1712 aaKnown RBP11.38□□□□□ -0.59
LINC00342-202ENST00000448494 FAM187AA6NFU0 413 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 BTNL10A8MVZ5 291 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 CENPBD1B2RD01 187 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 MAGEC1O60732 1142 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 KRT75O95678 551 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 CHEK2O96017 543 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 ENO2P09104 434 aaPredicted RBP11.38□□□□□ -0.59
LINC00342-202ENST00000448494 HNRNPFP52597 415 aaKnown RBP11.38□□□□□ -0.59
LINC00342-202ENST00000448494 THOP1P52888 689 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 NOP14P78316 857 aaKnown RBP11.38□□□□□ -0.59
LINC00342-202ENST00000448494 POU5F1Q01860 360 aaKnown RBP11.38□□□□□ -0.59
LINC00342-202ENST00000448494 GFPT1Q06210 699 aaPredicted RBP11.38□□□□□ -0.59
LINC00342-202ENST00000448494 PRKG1Q13976 671 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 KRT81Q14533 505 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 C6orf163Q5TEZ5 329 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 TMCO4Q5TGY1 634 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 LVRNQ6Q4G3 990 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 DCLK2Q8N568 766 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 ANKRD42Q8N9B4 389 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 LILRB4Q8NHJ6 448 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 DPF3Q92784 378 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 PTCD3Q96EY7 689 aaKnown RBP11.38□□□□□ -0.59
LINC00342-202ENST00000448494 RUNDC3BQ96NL0 473 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 PHF12Q96QT6 1004 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 OLFM1Q99784 485 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 AP1M1Q9BXS5 423 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 TYW1Q9NV66 732 aaKnown RBP11.38□□□□□ -0.59
LINC00342-202ENST00000448494 SLC38A7Q9NVC3 462 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 COMMD8Q9NX08 183 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 RSL24D1Q9UHA3 163 aaKnown RBP11.38□□□□□ -0.59
LINC00342-202ENST00000448494 DBR1Q9UK59 544 aaKnown RBP11.38□□□□□ -0.59
LINC00342-202ENST00000448494 PADI4Q9UM07 663 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 CEPT1Q9Y6K0 416 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.38□□□□□ -0.59
LINC00342-202ENST00000448494 RPTORQ8N122 1335 aa11.38□□□□□ -0.59
LINC00342-202ENST00000448494 MRC1P22897 1456 aa11.37□□□□□ -0.59
LINC00342-202ENST00000448494 NRKQ7Z2Y5 1582 aa11.37□□□□□ -0.59
LINC00342-202ENST00000448494 C2CD2LO14523 706 aa11.37□□□□□ -0.59
LINC00342-202ENST00000448494 FKBP6O75344 327 aa11.37□□□□□ -0.59
LINC00342-202ENST00000448494 HAUS5O94927 633 aa11.37□□□□□ -0.59
LINC00342-202ENST00000448494 KLK7P49862 253 aa11.37□□□□□ -0.59
LINC00342-202ENST00000448494 CDK9P50750 372 aaKnown RBP11.37□□□□□ -0.59
LINC00342-202ENST00000448494 NR1H2P55055 460 aa11.37□□□□□ -0.59
LINC00342-202ENST00000448494 PPP2R5BQ15173 497 aa11.37□□□□□ -0.59
LINC00342-202ENST00000448494 TRMT5Q32P41 509 aaKnown RBP11.37□□□□□ -0.59
LINC00342-202ENST00000448494 Q3C1V9 767 aa11.37□□□□□ -0.59
LINC00342-202ENST00000448494 ZNF829Q3KNS6 432 aaPredicted RBP11.37□□□□□ -0.59
LINC00342-202ENST00000448494 USP41Q3LFD5 358 aa11.37□□□□□ -0.59
LINC00342-202ENST00000448494 MMEL1Q495T6 779 aa11.37□□□□□ -0.59
LINC00342-202ENST00000448494 BARGINQ6ZT62 677 aa11.37□□□□□ -0.59
LINC00342-202ENST00000448494 RFPL4BQ6ZWI9 263 aa11.37□□□□□ -0.59
LINC00342-202ENST00000448494 CLNKQ7Z7G1 428 aa11.37□□□□□ -0.59
LINC00342-202ENST00000448494 ZNF598Q86UK7 904 aaKnown RBP11.37□□□□□ -0.59
LINC00342-202ENST00000448494 MMAAQ8IVH4 418 aaKnown RBP11.37□□□□□ -0.59
LINC00342-202ENST00000448494 MARVELD2Q8N4S9 558 aa11.37□□□□□ -0.59
LINC00342-202ENST00000448494 CPSF7Q8N684 471 aaKnown RBP11.37□□□□□ -0.59
LINC00342-202ENST00000448494 VPS37AQ8NEZ2 397 aa11.37□□□□□ -0.59
LINC00342-202ENST00000448494 C8orf48Q96LL4 319 aa11.37□□□□□ -0.59
LINC00342-202ENST00000448494 B3GNT4Q9C0J1 378 aa11.37□□□□□ -0.59
LINC00342-202ENST00000448494 ZNF696Q9H7X3 374 aa11.37□□□□□ -0.59
LINC00342-202ENST00000448494 KCNK9Q9NPC2 374 aa11.37□□□□□ -0.59
LINC00342-202ENST00000448494 MTRF1LQ9UGC7 380 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms