RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 CHP1Q99653 195 aa18.05■□□□□ 0.48
SNAPC3-202ENST00000380821 LXNQ9BS40 222 aa18.05■□□□□ 0.48
SNAPC3-202ENST00000380821 TRIM62Q9BVG3 475 aa18.05■□□□□ 0.48
SNAPC3-202ENST00000380821 PHF20Q9BVI0 1012 aa18.05■□□□□ 0.48
SNAPC3-202ENST00000380821 RBM12Q9NTZ6 932 aaKnown RBP18.05■□□□□ 0.48
SNAPC3-202ENST00000380821 APEX2Q9UBZ4 518 aa18.05■□□□□ 0.48
SNAPC3-202ENST00000380821 AURKCQ9UQB9 309 aa18.05■□□□□ 0.48
SNAPC3-202ENST00000380821 SCP2P22307 547 aa18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 STAT3P40763 770 aa18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 LBRQ14739 615 aaKnown RBP18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 KIAA1841Q6NSI8 718 aa18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 ADGRF4Q8IZF3 695 aa18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 MROH7-TTC4A0A0A0MT08 1334 aa18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 CCDC159P0C7I6 412 aa18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 RAP1GDS1P52306 607 aa18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 CDH6P55285 790 aa18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 Q3C1V9 767 aa18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 FAM102AQ5T9C2 384 aaPredicted RBP18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 ZIM3Q96PE6 472 aa18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 SPAG6O75602 509 aa18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 GH2P01242 217 aa18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 RBM15Q96T37 977 aaKnown RBP eCLIP18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 RMDN3Q96TC7 470 aa18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 DDX28Q9NUL7 540 aaKnown RBP18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 SRP72O76094 671 aaKnown RBP18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 ATP6V1E1P36543 226 aa18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 MRPL28Q13084 256 aaKnown RBP18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 MRPL1Q9BYD6 325 aaKnown RBP18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 ZFATQ9P243 1243 aa18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 FBXO40Q9UH90 709 aa18.04■□□□□ 0.48
SNAPC3-202ENST00000380821 ASNSP08243 561 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 HSPA1AP0DMV8 641 aaKnown RBP18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 HSPA1BP0DMV9 641 aaKnown RBP18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 EEPD1Q7L9B9 569 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 PATL1Q86TB9 770 aaKnown RBP18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 DTX3LQ8TDB6 740 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 CEP95Q96GE4 821 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 LMCD1Q9NZU5 365 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 TRIM49P0CI25 452 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 TRIM49CP0CI26 452 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 GFAPP14136 432 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 TSPY1Q01534 308 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 KRT33BQ14525 404 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 MXD4Q14582 209 aaPredicted RBP18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 NRKQ7Z2Y5 1582 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 ROBO2Q9HCK4 1378 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 GSG1L2A8MUP6 293 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 DDX5P17844 614 aaKnown RBP18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 IRAK1P51617 712 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 CYLC2Q14093 348 aaPredicted RBP18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 KDM7AQ6ZMT4 941 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 SENP7Q9BQF6 1050 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 TRIM9Q9C026 710 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 ADNPQ9H2P0 1102 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 DHX35Q9H5Z1 703 aaKnown RBP18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 CFAP65Q6ZU64 1925 aaKnown RBP18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 TET3O43151 1660 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 CYP26A1O43174 497 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 RAD51CO43502 376 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 TBC1D4O60343 1298 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 TDP2O95551 362 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 KCNQ4P56696 695 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 LZICQ8WZA0 190 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 ERP27Q96DN0 273 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 ALG13Q9NP73 1137 aaKnown RBP18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 DBR1Q9UK59 544 aaKnown RBP18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 BLOC1S6Q9UL45 172 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 PAIP2BQ9ULR5 123 aaKnown RBP18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 MAP3K4Q9Y6R4 1608 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 CDH2P19022 906 aaPredicted RBP18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 PRAMEP78395 509 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 IRX2Q9BZI1 471 aaPredicted RBP18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 SP110Q9HB58 689 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 RBAKQ9NYW8 714 aaPredicted RBP18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 NEU2Q9Y3R4 380 aa18.03■□□□□ 0.48
SNAPC3-202ENST00000380821 HNRNPRO43390 633 aaKnown RBP18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 HLA-DPA1P20036 260 aa18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 HSPA13P48723 471 aa18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 MRPS15P82914 257 aaKnown RBP18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 CENPCQ03188 943 aa18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 FOXD4Q12950 439 aaPredicted RBP18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 EPHA7Q15375 998 aa18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 MDH1BQ5I0G3 518 aa18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 NYAP1Q6ZVC0 841 aa18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 CYFIP1Q7L576 1253 aa18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 SEPT3Q9UH03 358 aa18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 SEC24DO94855 1032 aaPredicted RBP18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 CRKP46108 304 aa18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 ASCC2Q9H1I8 757 aaPredicted RBP18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 KDM4CQ9H3R0 1056 aa18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 KCNA2P16389 499 aa18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 BAG6P46379 1132 aa18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 JAMLQ86YT9 394 aa18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 NSUN6Q8TEA1 469 aaKnown RBP18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 SYN2Q92777 582 aaPredicted RBP18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 ARHGEF26Q96DR7 871 aa18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 EGFL8Q99944 293 aa18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 MMTAG2Q9BU76 263 aaKnown RBP18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 UNC45AQ9H3U1 944 aa18.02■□□□□ 0.48
SNAPC3-202ENST00000380821 PREX2Q70Z35 1606 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms