RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 KMT5AQ9NQR1 393 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 EXOC7Q9UPT5 735 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 RIPK3Q9Y572 518 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 TNS1Q9HBL0 1735 aaKnown RBP11.71□□□□□ -0.53
BEST1-201ENST00000378043 COL11A1P12107 1806 aaPredicted RBP11.71□□□□□ -0.53
BEST1-201ENST00000378043 DNM1LO00429 736 aa11.71□□□□□ -0.53
BEST1-201ENST00000378043 FSCN2O14926 492 aa11.71□□□□□ -0.53
BEST1-201ENST00000378043 RARGP13631 454 aa11.71□□□□□ -0.53
BEST1-201ENST00000378043 SFNP31947 248 aa11.71□□□□□ -0.53
BEST1-201ENST00000378043 GBP1P32455 592 aa11.71□□□□□ -0.53
BEST1-201ENST00000378043 RWDD2BP57060 319 aa11.71□□□□□ -0.53
BEST1-201ENST00000378043 CCDC13Q8IYE1 715 aa11.71□□□□□ -0.53
BEST1-201ENST00000378043 RTKN2Q8IZC4 609 aa11.71□□□□□ -0.53
BEST1-201ENST00000378043 TTLL6Q8N841 843 aa11.71□□□□□ -0.53
BEST1-201ENST00000378043 SLC17A8Q8NDX2 589 aa11.71□□□□□ -0.53
BEST1-201ENST00000378043 ZNF516Q92618 1163 aa11.71□□□□□ -0.53
BEST1-201ENST00000378043 TMEM109Q9BVC6 243 aa11.71□□□□□ -0.53
BEST1-201ENST00000378043 AAASQ9NRG9 546 aa11.71□□□□□ -0.53
BEST1-201ENST00000378043 CTNND1O60716 968 aaKnown RBP11.71□□□□□ -0.54
BEST1-201ENST00000378043 EGFRP00533 1210 aa11.71□□□□□ -0.54
BEST1-201ENST00000378043 DLATP10515 647 aaKnown RBP11.71□□□□□ -0.54
BEST1-201ENST00000378043 UNGP13051 313 aaPredicted RBP11.71□□□□□ -0.54
BEST1-201ENST00000378043 CLEC16AQ2KHT3 1053 aa11.71□□□□□ -0.54
BEST1-201ENST00000378043 LLGL2Q6P1M3 1020 aa11.71□□□□□ -0.54
BEST1-201ENST00000378043 RNF207Q6ZRF8 634 aa11.71□□□□□ -0.54
BEST1-201ENST00000378043 TAS1R3Q7RTX0 852 aa11.71□□□□□ -0.54
BEST1-201ENST00000378043 AGBL3Q8NEM8 1001 aa11.71□□□□□ -0.54
BEST1-201ENST00000378043 C1orf54Q8WWF1 131 aa11.71□□□□□ -0.54
BEST1-201ENST00000378043 SPIRE2Q8WWL2 714 aa11.71□□□□□ -0.54
BEST1-201ENST00000378043 POMGNT1Q8WZA1 660 aa11.71□□□□□ -0.54
BEST1-201ENST00000378043 HVCN1Q96D96 273 aa11.71□□□□□ -0.54
BEST1-201ENST00000378043 JPH2Q9BR39 696 aaPredicted RBP11.71□□□□□ -0.54
BEST1-201ENST00000378043 MOV10L1Q9BXT6 1211 aaKnown RBP11.71□□□□□ -0.54
BEST1-201ENST00000378043 MTFR1LQ9H019 292 aa11.71□□□□□ -0.54
BEST1-201ENST00000378043 PDLIM7Q9NR12 457 aa11.71□□□□□ -0.54
BEST1-201ENST00000378043 MTRF1LQ9UGC7 380 aaKnown RBP11.71□□□□□ -0.54
BEST1-201ENST00000378043 PARP2Q9UGN5 583 aa11.71□□□□□ -0.54
BEST1-201ENST00000378043 MTUS1Q9ULD2 1270 aa11.71□□□□□ -0.54
BEST1-201ENST00000378043 KCNA3P22001 575 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 SLCO1A2P46721 670 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 CXCL9Q07325 125 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 C15orf39Q6ZRI6 1047 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 CYFIP1Q7L576 1253 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 SLCO2A1Q92959 643 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 CHMP6Q96FZ7 201 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 CABS1Q96KC9 395 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 XPNPEP1Q9NQW7 623 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 ZNRF3Q9ULT6 936 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 RLFQ13129 1914 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 MYH9P35579 1960 aaKnown RBP11.7□□□□□ -0.54
BEST1-201ENST00000378043 MROH7Q68CQ1 1323 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 RGS16O15492 202 aaPredicted RBP11.7□□□□□ -0.54
BEST1-201ENST00000378043 RGS20O76081 388 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 IVDP26440 423 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 GTF2H1P32780 548 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 WNT7BP56706 349 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 AUHQ13825 339 aaKnown RBP11.7□□□□□ -0.54
BEST1-201ENST00000378043 C2CD6Q53TS8 623 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 ARHGEF16Q5VV41 709 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 CPLX4Q7Z7G2 160 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 VSIG10LQ86VR7 867 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 CACNA2D3Q8IZS8 1091 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 CEP170P1Q96L14 293 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 CHST7Q9NS84 486 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 GABBR1Q9UBS5 961 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 ANAPC7Q9UJX3 599 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 PCDHA10Q9Y5I2 948 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 MYPNQ86TC9 1320 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 PASKQ96RG2 1323 aa11.7□□□□□ -0.54
BEST1-201ENST00000378043 HNRNPDLO14979 420 aaKnown RBP11.69□□□□□ -0.54
BEST1-201ENST00000378043 ECEL1O95672 775 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 KRT5P13647 590 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 GCNT1Q02742 428 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 ADCY2Q08462 1091 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 MTMR2Q13614 643 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 BAATQ14032 418 aaPredicted RBP11.69□□□□□ -0.54
BEST1-201ENST00000378043 SLMAPQ14BN4 828 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 C6orf118Q5T5N4 469 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 GKAP1Q5VSY0 366 aaPredicted RBP11.69□□□□□ -0.54
BEST1-201ENST00000378043 DAB2IPQ5VWQ8 1189 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 RHBDF2Q6PJF5 856 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 ARMC9Q7Z3E5 817 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 PHLDB2Q86SQ0 1253 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 SAMD3Q8N6K7 520 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 ATG4AQ8WYN0 398 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 KIFAP3Q92845 792 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 SELENOSQ9BQE4 189 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 FAM213AQ9BRX8 229 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 DDX23Q9BUQ8 820 aaKnown RBP11.69□□□□□ -0.54
BEST1-201ENST00000378043 H0YHG0 523 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 VWA5AO00534 786 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 AGTP01019 485 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 SCP2P22307 547 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 RRM1P23921 792 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 DRP2Q13474 957 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 SNX1Q13596 522 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 ANKRD20A8PQ5CZ79 823 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 CCDC121Q6ZUS5 278 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 MCOLN2Q8IZK6 566 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 GPD1LQ8N335 351 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms