RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 TBK1Q9UHD2 729 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 PCYOX1Q9UHG3 505 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 A0A0A6YYK5 440 aaPredicted RBP10.17□□□□□ -0.78
SF3A3-201ENST00000373019 E9PBE3 544 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 LSM1O15116 133 aaKnown RBP10.17□□□□□ -0.78
SF3A3-201ENST00000373019 HNRNPCL1O60812 293 aaKnown RBP10.17□□□□□ -0.78
SF3A3-201ENST00000373019 IDH1O75874 414 aaKnown RBP10.17□□□□□ -0.78
SF3A3-201ENST00000373019 ATP5DP30049 168 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 IL9RQ01113 521 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 PPP2R5EQ16537 467 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 TMEM266Q2M3C6 531 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 SLC27A3Q5K4L6 730 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 ZNF790Q6PG37 636 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 RGS9BPQ6ZS82 235 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 TRMT10CQ7L0Y3 403 aaKnown RBP10.17□□□□□ -0.78
SF3A3-201ENST00000373019 CCDC25Q86WR0 208 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 BBS5Q8N3I7 341 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 ERMNQ8TAM6 284 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 DQX1Q8TE96 717 aaKnown RBP10.17□□□□□ -0.78
SF3A3-201ENST00000373019 PRR11Q96HE9 360 aaPredicted RBP10.17□□□□□ -0.78
SF3A3-201ENST00000373019 GPCPD1Q9NPB8 672 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 EURLQ9NYK6 297 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 HESX1Q9UBX0 185 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 TJP1Q07157 1748 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 TNKSO95271 1327 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 SMIM22K7EJ46 135 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 P4HA2O15460 535 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 PRKAB2O43741 272 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 PSMD7P51665 324 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 NPEPPSP55786 919 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 PPP2R5BQ15173 497 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 GRAMD4Q6IC98 578 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 RAPH1Q70E73 1250 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 STK33Q9BYT3 514 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 PDGFDQ9GZP0 370 aaPredicted RBP10.16□□□□□ -0.78
SF3A3-201ENST00000373019 UBN1Q9NPG3 1134 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 ZDHHC7Q9NXF8 308 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 NKIRAS1Q9NYS0 192 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 NDUFA13Q9P0J0 144 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 AMFRQ9UKV5 643 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 NAALADL1Q9UQQ1 740 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.16□□□□□ -0.78
SF3A3-201ENST00000373019 A8MXQ7 604 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 GYG2O15488 501 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 USP1O94782 785 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 GSTT2P0CG29 244 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 GSTT2BP0CG30 244 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 CHRNB2P17787 502 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 ERFP50548 548 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 LRRC63Q05C16 580 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 PPATQ06203 517 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 SLC2A7Q6PXP3 512 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 PPP1R21Q6ZMI0 780 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 NANOGNBQ7Z5D8 188 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 PDSS2Q86YH6 399 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 SCYL3Q8IZE3 742 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 SYCE1Q8N0S2 351 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 NUP93Q8N1F7 819 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 SRBD1Q8N5C6 995 aaKnown RBP10.16□□□□□ -0.78
SF3A3-201ENST00000373019 ZFP28Q8NHY6 868 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 MAML3Q96JK9 1138 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 TCP11L1Q9NUJ3 509 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 ZNF219Q9P2Y4 722 aaPredicted RBP10.16□□□□□ -0.78
SF3A3-201ENST00000373019 CNTNAP5Q8WYK1 1306 aa10.16□□□□□ -0.78
SF3A3-201ENST00000373019 PHF2O75151 1096 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 TTLL1O95922 423 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 PFKPQ01813 784 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 CYP4A11Q02928 519 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 TROAPQ12815 778 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 MSLNQ13421 630 aaPredicted RBP10.15□□□□□ -0.78
SF3A3-201ENST00000373019 ITGA7Q13683 1181 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 SMUG1Q53HV7 270 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 C1orf228Q6PIY5 440 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 OTOAQ7RTW8 1153 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 GUF1Q8N442 669 aaKnown RBP10.15□□□□□ -0.78
SF3A3-201ENST00000373019 OLIG1Q8TAK6 271 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 PARP2Q9UGN5 583 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 LGALS13Q9UHV8 139 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 RASAL2Q9UJF2 1139 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 TELO2Q9Y4R8 837 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.15□□□□□ -0.78
SF3A3-201ENST00000373019 PODXLO00592 558 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 ATMINO43313 823 aaPredicted RBP10.15□□□□□ -0.78
SF3A3-201ENST00000373019 TCEA3O75764 348 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 KRT13P13646 458 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 CHKAP35790 457 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 UGT2A3Q6UWM9 527 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 EPM2AIP1Q7L775 607 aaPredicted RBP10.15□□□□□ -0.78
SF3A3-201ENST00000373019 ENAHQ8N8S7 591 aaPredicted RBP10.15□□□□□ -0.78
SF3A3-201ENST00000373019 ARPP21Q9UBL0 812 aaPredicted RBP10.15□□□□□ -0.78
SF3A3-201ENST00000373019 ITGB1BP2Q9UKP3 347 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 ANGPTL2Q9UKU9 493 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 PPM1HQ9ULR3 514 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.15□□□□□ -0.78
SF3A3-201ENST00000373019 CFAP69A5D8W1 941 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 FAM47DPA6NHR8 397 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 NDUFB5O43674 189 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 AP1G1O43747 822 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 GAS8O95995 478 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 TROVE2P10155 538 aaKnown RBP eCLIP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms