RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 XPNPEP1Q9NQW7 623 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 CLEC1BQ9P126 229 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 LZTS1Q9Y250 596 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 V9GYY5 206 aaPredicted RBP11.34□□□□□ -0.59
COL5A1-202ENST00000371820 CNTNAP2Q9UHC6 1331 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 C5orf42Q9H799 3197 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 INO80B-WBP1J3KQ70 363 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 ZBTB39O15060 712 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 KIF5CO60282 957 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 USO1O60763 962 aaKnown RBP11.33□□□□□ -0.6
COL5A1-202ENST00000371820 FGF18O76093 207 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 URI1O94763 535 aaPredicted RBP11.33□□□□□ -0.6
COL5A1-202ENST00000371820 GLP2RO95838 553 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 SPATA31C1P0DKV0 1188 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 MCM3P25205 808 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 CCT6AP40227 531 aaKnown RBP11.33□□□□□ -0.6
COL5A1-202ENST00000371820 NRIP1P48552 1158 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 PTENP60484 403 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 PLCB3Q01970 1234 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 COASYQ13057 564 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 PTGDRQ13258 359 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 PDIA5Q14554 519 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 HERC4Q5GLZ8 1057 aaPredicted RBP11.33□□□□□ -0.6
COL5A1-202ENST00000371820 NOTUMQ6P988 496 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 KCNT2Q6UVM3 1135 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 ZBTB8OSQ8IWT0 167 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 SMRP1Q8NCR6 262 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 HELQQ8TDG4 1101 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 MICAL1Q8TDZ2 1067 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 RABGGTAQ92696 567 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 ERCC4Q92889 916 aaPredicted RBP11.33□□□□□ -0.6
COL5A1-202ENST00000371820 CSRNP2Q9H175 543 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 POLR3FQ9H1D9 316 aaPredicted RBP11.33□□□□□ -0.6
COL5A1-202ENST00000371820 C2orf40Q9H1Z8 148 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 CWH43Q9H720 699 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 UBN1Q9NPG3 1134 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 TLR9Q9NR96 1032 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 RNF19AQ9NV58 838 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 LRWD1Q9UFC0 647 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 RWDD2AQ9UIY3 292 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 PCDHGC5Q9Y5F6 944 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 ZNF318Q5VUA4 2279 aa11.33□□□□□ -0.6
COL5A1-202ENST00000371820 MED24O75448 989 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 ERLIN1O75477 346 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 SRGAP2BP0DMP2 458 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 ATP1A3P13637 1013 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 ATF7P17544 494 aaPredicted RBP11.32□□□□□ -0.6
COL5A1-202ENST00000371820 ARL2P36404 184 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 ALDH7A1P49419 539 aaKnown RBP11.32□□□□□ -0.6
COL5A1-202ENST00000371820 ATP2C1P98194 919 aaPredicted RBP11.32□□□□□ -0.6
COL5A1-202ENST00000371820 RNASELQ05823 741 aaKnown RBP11.32□□□□□ -0.6
COL5A1-202ENST00000371820 CAPSQ13938 189 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 BRD3Q15059 726 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 PPP2R5AQ15172 486 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 NOMO2Q5JPE7 1267 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 CLLU1OSQ5K130 101 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 KRT79Q5XKE5 535 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 ISM2Q6H9L7 571 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 TRIM65Q6PJ69 517 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 DTHD1Q6ZMT9 781 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 RNF135Q8IUD6 432 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 TSC1Q92574 1164 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 PAGE5Q96GU1 130 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 PKNOX2Q96KN3 472 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 CDCA3Q99618 268 aaPredicted RBP11.32□□□□□ -0.6
COL5A1-202ENST00000371820 NUP58Q9BVL2 599 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 NGRNQ9NPE2 291 aaKnown RBP11.32□□□□□ -0.6
COL5A1-202ENST00000371820 SPG21Q9NZD8 308 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 KANSL3Q9P2N6 904 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 HCSTQ9UBK5 93 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 STK39Q9UEW8 545 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 LIMA1Q9UHB6 759 aaKnown RBP11.32□□□□□ -0.6
COL5A1-202ENST00000371820 MUTYHQ9UIF7 546 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 BARX2Q9UMQ3 279 aaPredicted RBP11.32□□□□□ -0.6
COL5A1-202ENST00000371820 PCDHB6Q9Y5E3 794 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 PCDHB2Q9Y5E7 798 aa11.32□□□□□ -0.6
COL5A1-202ENST00000371820 LRRIQ4A6NIV6 560 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 GLRA2P23416 452 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 GNG11P61952 73 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 AMPD3Q01432 767 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 DPYDQ12882 1025 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 KCNB1Q14721 858 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 KMT5BQ4FZB7 885 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 POTEGQ6S5H5 508 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 PADI6Q6TGC4 694 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 RBM23Q86U06 439 aaKnown RBP11.31□□□□□ -0.6
COL5A1-202ENST00000371820 FAM114A1Q8IWE2 563 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 KCTD17Q8N5Z5 321 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 C4orf32Q8N8J7 132 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 IGSF22Q8N9C0 903 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 TC2NQ8N9U0 490 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 SNX29Q8TEQ0 813 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 GOLGA1Q92805 767 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 TMEM169Q96HH4 297 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 IFT74Q96LB3 600 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 AK8Q96MA6 479 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 FAM193BQ96PV7 902 aaPredicted RBP11.31□□□□□ -0.6
COL5A1-202ENST00000371820 TRIM6Q9C030 488 aaPredicted RBP11.31□□□□□ -0.6
COL5A1-202ENST00000371820 LRRC27Q9C0I9 530 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 ACBD3Q9H3P7 528 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms