RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 CYBAP13498 195 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 HNRNPH1P31943 449 aaKnown RBP6.14□□□□□ -1.43
CD47-201ENST00000355354 BTDP43251 543 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 CCR10P46092 362 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 CBWD2Q8IUF1 395 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 FITM2Q8N6M3 262 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 BCAS4Q8TDM0 211 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 MRRFQ96E11 262 aaKnown RBP6.14□□□□□ -1.43
CD47-201ENST00000355354 OXCT2Q9BYC2 517 aaPredicted RBP6.14□□□□□ -1.43
CD47-201ENST00000355354 MTMR4Q9NYA4 1195 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 CHD6Q8TD26 2715 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 PCDH15Q96QU1 1955 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 BHMG1C9JSJ3 638 aaPredicted RBP6.14□□□□□ -1.43
CD47-201ENST00000355354 DHX15O43143 795 aaKnown RBP6.14□□□□□ -1.43
CD47-201ENST00000355354 GTPBP6O43824 516 aaPredicted RBP6.14□□□□□ -1.43
CD47-201ENST00000355354 LINC00271P0C7V0 271 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 TNNI2P48788 182 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 GDF10P55107 478 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 TAF3Q5VWG9 929 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 ZNF280DQ6N043 979 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 BLIDQ8IZY5 108 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 DIS3LQ8TF46 1054 aaKnown RBP6.14□□□□□ -1.43
CD47-201ENST00000355354 TRAPPC12Q8WVT3 735 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 STAMBPL1Q96FJ0 436 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 FAXDC2Q96IV6 333 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 ZNF317Q96PQ6 595 aaPredicted RBP6.14□□□□□ -1.43
CD47-201ENST00000355354 FOXP1Q9H334 677 aaPredicted RBP6.14□□□□□ -1.43
CD47-201ENST00000355354 CRISPLD1Q9H336 500 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 NDST4Q9H3R1 872 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 PPANQ9NQ55 473 aaKnown RBP6.14□□□□□ -1.43
CD47-201ENST00000355354 CTDP1Q9Y5B0 961 aaPredicted RBP6.14□□□□□ -1.43
CD47-201ENST00000355354 ACACBO00763 2458 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 A0A1W2PPM1 405 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 F8W810 466 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 PI4K2BG5E9Z4 385 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 PDHXO00330 501 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 FOXD2O60548 495 aaPredicted RBP6.13□□□□□ -1.43
CD47-201ENST00000355354 PDE4DQ08499 809 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 RNF20Q5VTR2 975 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 RPS27LQ71UM5 84 aaKnown RBP6.13□□□□□ -1.43
CD47-201ENST00000355354 PPP1R16BQ96T49 567 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 ZDHHC18Q9NUE0 388 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 TNRC6BQ9UPQ9 1833 aaKnown RBP6.13□□□□□ -1.43
CD47-201ENST00000355354 PLXND1Q9Y4D7 1925 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 CCDC151A5D8V7 595 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 SLITRK3O94933 977 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 KIF20AO95235 890 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 RPSAP08865 295 aaKnown RBP6.13□□□□□ -1.43
CD47-201ENST00000355354 POU3F3P20264 500 aaPredicted RBP6.13□□□□□ -1.43
CD47-201ENST00000355354 CAP2P40123 477 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 DLGAP5Q15398 846 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 ALX1Q15699 326 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 ADAM32Q8TC27 787 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 IPO4Q8TEX9 1081 aaKnown RBP6.13□□□□□ -1.43
CD47-201ENST00000355354 SAAL1Q96ER3 474 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 MIPEPQ99797 713 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 HOMER2Q9NSB8 354 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 BARHL2Q9NY43 387 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 GTF3C4Q9UKN8 822 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 TTF2Q9UNY4 1162 aaKnown RBP6.13□□□□□ -1.43
CD47-201ENST00000355354 DENND4CQ5VZ89 1909 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 TSC2P49815 1807 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 RHOBTB3O94955 611 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 EEF2P13639 858 aaKnown RBP6.13□□□□□ -1.43
CD47-201ENST00000355354 SUPT20HL1Q3ZLR7 823 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 DSTYKQ6XUX3 929 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 CLPTM1LQ96KA5 538 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 SMIM14Q96QK8 99 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 BPIFA3Q9BQP9 254 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 TLR8Q9NR97 1041 aaKnown RBP6.13□□□□□ -1.43
CD47-201ENST00000355354 FAM169AQ9Y6X4 670 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 CCL5P13501 91 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 HSD17B3P37058 310 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 GHRHRQ02643 423 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 ZNF394Q53GI3 561 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 CYFIP1Q7L576 1253 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 SFR1Q86XK3 245 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 ZNF570Q96NI8 536 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 TWNKQ96RR1 684 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 RNF26Q9BY78 433 aaPredicted RBP6.13□□□□□ -1.43
CD47-201ENST00000355354 UPF3AQ9H1J1 476 aaKnown RBP6.13□□□□□ -1.43
CD47-201ENST00000355354 SH2D4AQ9H788 454 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 CAPN11Q9UMQ6 739 aa6.13□□□□□ -1.43
CD47-201ENST00000355354 ITPR2Q14571 2701 aa6.12□□□□□ -1.43
CD47-201ENST00000355354 IGHMBP2P38935 993 aaKnown RBP6.12□□□□□ -1.43
CD47-201ENST00000355354 IREB2P48200 963 aaKnown RBP6.12□□□□□ -1.43
CD47-201ENST00000355354 CDK7P50613 346 aa6.12□□□□□ -1.43
CD47-201ENST00000355354 SLC12A3P55017 1021 aa6.12□□□□□ -1.43
CD47-201ENST00000355354 SLC10A2Q12908 348 aaPredicted RBP6.12□□□□□ -1.43
CD47-201ENST00000355354 GIT2Q14161 759 aa6.12□□□□□ -1.43
CD47-201ENST00000355354 KIAA0753Q2KHM9 967 aa6.12□□□□□ -1.43
CD47-201ENST00000355354 RFWD3Q6PCD5 774 aa6.12□□□□□ -1.43
CD47-201ENST00000355354 C9orf72Q96LT7 481 aa6.12□□□□□ -1.43
CD47-201ENST00000355354 UBAC1Q9BSL1 405 aa6.12□□□□□ -1.43
CD47-201ENST00000355354 UNC93B1Q9H1C4 597 aa6.12□□□□□ -1.43
CD47-201ENST00000355354 VAV3Q9UKW4 847 aa6.12□□□□□ -1.43
CD47-201ENST00000355354 SNX24Q9Y343 169 aa6.12□□□□□ -1.43
CD47-201ENST00000355354 EML5Q05BV3 1969 aa6.12□□□□□ -1.43
CD47-201ENST00000355354 STK10O94804 968 aaKnown RBP6.12□□□□□ -1.43
CD47-201ENST00000355354 PDIA4P13667 645 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms