RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 VRTNQ9H8Y1 702 aa5.6□□□□□ -1.51
LRIT3-201ENST00000327908 PARP2Q9UGN5 583 aa5.6□□□□□ -1.51
LRIT3-201ENST00000327908 KIAA1257Q9ULG3 409 aa5.6□□□□□ -1.51
LRIT3-201ENST00000327908 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.6□□□□□ -1.51
LRIT3-201ENST00000327908 SYN3O14994 580 aa5.6□□□□□ -1.51
LRIT3-201ENST00000327908 DTNBO60941 627 aa5.6□□□□□ -1.51
LRIT3-201ENST00000327908 MYCP01106 439 aaPredicted RBP5.6□□□□□ -1.51
LRIT3-201ENST00000327908 CYP2C18P33260 490 aa5.6□□□□□ -1.51
LRIT3-201ENST00000327908 SNRNP35Q16560 246 aaKnown RBP5.6□□□□□ -1.51
LRIT3-201ENST00000327908 MEA1Q16626 185 aa5.6□□□□□ -1.51
LRIT3-201ENST00000327908 TSR1Q2NL82 804 aaKnown RBP5.6□□□□□ -1.51
LRIT3-201ENST00000327908 FAM109BQ6ICB4 259 aaPredicted RBP5.6□□□□□ -1.51
LRIT3-201ENST00000327908 DCLRE1AQ6PJP8 1040 aa5.6□□□□□ -1.51
LRIT3-201ENST00000327908 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.6□□□□□ -1.51
LRIT3-201ENST00000327908 ZNF598Q86UK7 904 aaKnown RBP5.6□□□□□ -1.51
LRIT3-201ENST00000327908 PPFIBP1Q86W92 1011 aa5.6□□□□□ -1.51
LRIT3-201ENST00000327908 MSANTD4Q8NCY6 345 aa5.6□□□□□ -1.51
LRIT3-201ENST00000327908 DBF4BQ8NFT6 615 aa5.6□□□□□ -1.51
LRIT3-201ENST00000327908 C2orf15Q8WU43 125 aaKnown RBP5.6□□□□□ -1.51
LRIT3-201ENST00000327908 HDAC7Q8WUI4 952 aa5.6□□□□□ -1.51
LRIT3-201ENST00000327908 UIMC1Q96RL1 719 aa5.6□□□□□ -1.51
LRIT3-201ENST00000327908 CDCA3Q99618 268 aaPredicted RBP5.6□□□□□ -1.51
LRIT3-201ENST00000327908 C11orf84Q9BUA3 381 aaPredicted RBP5.6□□□□□ -1.51
LRIT3-201ENST00000327908 WNT8AQ9H1J5 351 aa5.6□□□□□ -1.51
LRIT3-201ENST00000327908 ANKFY1Q9P2R3 1169 aa5.6□□□□□ -1.51
LRIT3-201ENST00000327908 LIMA1Q9UHB6 759 aaKnown RBP5.6□□□□□ -1.51
LRIT3-201ENST00000327908 GINS2Q9Y248 185 aa5.6□□□□□ -1.51
LRIT3-201ENST00000327908 IPPQ9Y573 584 aa5.6□□□□□ -1.51
LRIT3-201ENST00000327908 ADGRA3Q8IWK6 1321 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 CLDN10P78369 228 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 ZNF200P98182 395 aaPredicted RBP5.59□□□□□ -1.51
LRIT3-201ENST00000327908 RNASELQ05823 741 aaKnown RBP5.59□□□□□ -1.51
LRIT3-201ENST00000327908 BFSP1Q12934 665 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 STK4Q13043 487 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 PLD1Q13393 1074 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 SGSM1Q2NKQ1 1148 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 TMEM240Q5SV17 173 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 KRT39Q6A163 491 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 GBP6Q6ZN66 633 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 FBXO22Q8NEZ5 403 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 ZNF397Q8NF99 534 aaPredicted RBP5.59□□□□□ -1.51
LRIT3-201ENST00000327908 SP7Q8TDD2 431 aaPredicted RBP5.59□□□□□ -1.51
LRIT3-201ENST00000327908 TOP1MTQ969P6 601 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 ZNHIT6Q9NWK9 470 aaKnown RBP5.59□□□□□ -1.51
LRIT3-201ENST00000327908 TMEM63CQ9P1W3 806 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 LCMT1Q9UIC8 334 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 ZMYM5Q9UJ78 669 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 FBXL5Q9UKA1 691 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 NPHP3-ACAD11A0A0J9YXS1 232 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 A0A1W2PQC6 194 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 TRIM43BA6NCK2 446 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 ZBBXA8MT70 800 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 NBNO60934 754 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 ATP2A2P16615 1042 aaKnown RBP5.59□□□□□ -1.51
LRIT3-201ENST00000327908 MXI1P50539 228 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 WDR5P61964 334 aaKnown RBP5.59□□□□□ -1.51
LRIT3-201ENST00000327908 HTRA4P83105 476 aaPredicted RBP5.59□□□□□ -1.51
LRIT3-201ENST00000327908 CAMK4Q16566 473 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 CEP135Q66GS9 1140 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 SARM1Q6SZW1 724 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 THEM5Q8N1Q8 247 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 BADQ92934 168 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 TRIM43Q96BQ3 446 aaPredicted RBP5.59□□□□□ -1.51
LRIT3-201ENST00000327908 CALR3Q96L12 384 aaKnown RBP5.59□□□□□ -1.51
LRIT3-201ENST00000327908 YME1L1Q96TA2 773 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 HERC2P3Q9BVR0 1158 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 INTS13Q9NVM9 706 aa5.59□□□□□ -1.51
LRIT3-201ENST00000327908 RECQL4O94761 1208 aa5.59□□□□□ -1.52
LRIT3-201ENST00000327908 ODC1P11926 461 aa5.59□□□□□ -1.52
LRIT3-201ENST00000327908 TAF6P49848 677 aa5.59□□□□□ -1.52
LRIT3-201ENST00000327908 MYL7Q01449 175 aa5.59□□□□□ -1.52
LRIT3-201ENST00000327908 RAD51AP2Q09MP3 1159 aa5.59□□□□□ -1.52
LRIT3-201ENST00000327908 ANO6Q4KMQ2 910 aa5.59□□□□□ -1.52
LRIT3-201ENST00000327908 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.59□□□□□ -1.52
LRIT3-201ENST00000327908 HERC6Q8IVU3 1022 aa5.59□□□□□ -1.52
LRIT3-201ENST00000327908 NELFCDQ8IXH7 590 aa5.59□□□□□ -1.52
LRIT3-201ENST00000327908 TOP6BLQ8N6T0 577 aa5.59□□□□□ -1.52
LRIT3-201ENST00000327908 LUC7LQ9NQ29 371 aaKnown RBP5.59□□□□□ -1.52
LRIT3-201ENST00000327908 SPG21Q9NZD8 308 aa5.59□□□□□ -1.52
LRIT3-201ENST00000327908 HSFX1Q9UBD0 423 aa5.59□□□□□ -1.52
LRIT3-201ENST00000327908 SF3B1O75533 1304 aaKnown RBP eCLIP5.58□□□□□ -1.52
LRIT3-201ENST00000327908 TTC26A0AVF1 554 aa5.58□□□□□ -1.52
LRIT3-201ENST00000327908 TMEM150BA6NC51 233 aa5.58□□□□□ -1.52
LRIT3-201ENST00000327908 OR6C75A6NL08 312 aa5.58□□□□□ -1.52
LRIT3-201ENST00000327908 KCNJ18B7U540 433 aa5.58□□□□□ -1.52
LRIT3-201ENST00000327908 ZBTB39O15060 712 aa5.58□□□□□ -1.52
LRIT3-201ENST00000327908 TGFB1I1O43294 461 aa5.58□□□□□ -1.52
LRIT3-201ENST00000327908 GFPT2O94808 682 aa5.58□□□□□ -1.52
LRIT3-201ENST00000327908 FGF19O95750 216 aa5.58□□□□□ -1.52
LRIT3-201ENST00000327908 POU2F2P09086 479 aa5.58□□□□□ -1.52
LRIT3-201ENST00000327908 PCSK1P29120 753 aa5.58□□□□□ -1.52
LRIT3-201ENST00000327908 LHX1P48742 406 aa5.58□□□□□ -1.52
LRIT3-201ENST00000327908 CYP2J2P51589 502 aa5.58□□□□□ -1.52
LRIT3-201ENST00000327908 CCL23P55773 120 aa5.58□□□□□ -1.52
LRIT3-201ENST00000327908 TNNC1P63316 161 aa5.58□□□□□ -1.52
LRIT3-201ENST00000327908 KCNJ12Q14500 433 aa5.58□□□□□ -1.52
LRIT3-201ENST00000327908 TIGD5Q53EQ6 642 aa5.58□□□□□ -1.52
LRIT3-201ENST00000327908 UBXN11Q5T124 520 aa5.58□□□□□ -1.52
LRIT3-201ENST00000327908 GRAMD1CQ8IYS0 662 aa5.58□□□□□ -1.52
LRIT3-201ENST00000327908 TDHQ8IZJ6 230 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms