RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 NSFP46459 744 aaKnown RBP17.6■□□□□ 0.41
PACS1-201ENST00000320580 NOP14P78316 857 aaKnown RBP17.6■□□□□ 0.41
PACS1-201ENST00000320580 HLFQ16534 295 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 CLEC4GQ6UXB4 293 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 CCDC80Q76M96 950 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 ZNF572Q7Z3I7 529 aaPredicted RBP17.6■□□□□ 0.41
PACS1-201ENST00000320580 BAP1Q92560 729 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 CNBD2Q96M20 576 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 ZNF317Q96PQ6 595 aaPredicted RBP17.6■□□□□ 0.41
PACS1-201ENST00000320580 PHACTR1Q9C0D0 580 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 LRMDAQ9H2I8 198 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 TMEM260Q9NX78 707 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 A0A1B0GVG6 124 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 ARHGEF35A5YM69 484 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 GH1P01241 217 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 LDHBP07195 334 aaKnown RBP17.59■□□□□ 0.41
PACS1-201ENST00000320580 RGS2P41220 211 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 DYNLT1P63172 113 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 GPS1Q13098 491 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 NT5DC3Q86UY8 548 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 TGFBRAP1Q8WUH2 860 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 EYA3Q99504 573 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 THAP2Q9H0W7 228 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 CCDC68Q9H2F9 335 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 MANSC1Q9H8J5 431 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 STRNO43815 780 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 GSTO1P78417 241 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 BASP1P80723 227 aaKnown RBP17.59■□□□□ 0.41
PACS1-201ENST00000320580 C16orf72Q14CZ0 275 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 WDR44Q5JSH3 913 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 LRRC6Q86X45 466 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 ATL2Q8NHH9 583 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 MAML3Q96JK9 1138 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 CCT7Q99832 543 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 CDCA7Q9BWT1 371 aaPredicted RBP17.59■□□□□ 0.41
PACS1-201ENST00000320580 BCS1LQ9Y276 419 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 CYP2D6P10635 497 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 KNOP1Q1ED39 458 aaKnown RBP17.59■□□□□ 0.41
PACS1-201ENST00000320580 SPDYCQ5MJ68 293 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 CCDC24Q8N4L8 307 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 FERMT1Q9BQL6 677 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 PCIF1Q9H4Z3 704 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 ZNF652Q9Y2D9 606 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 JCADQ9P266 1359 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 CNTNAP5Q8WYK1 1306 aa17.59■□□□□ 0.41
PACS1-201ENST00000320580 TDP2O95551 362 aa17.58■□□□□ 0.41
PACS1-201ENST00000320580 MCF2P10911 925 aa17.58■□□□□ 0.41
PACS1-201ENST00000320580 SLC13A5Q86YT5 568 aaPredicted RBP17.58■□□□□ 0.41
PACS1-201ENST00000320580 PKD2L1Q9P0L9 805 aa17.58■□□□□ 0.41
PACS1-201ENST00000320580 ADAMTSL3P82987 1691 aa17.58■□□□□ 0.41
PACS1-201ENST00000320580 LYNP07948 512 aa17.58■□□□□ 0.41
PACS1-201ENST00000320580 TRIM49P0CI25 452 aa17.58■□□□□ 0.41
PACS1-201ENST00000320580 TRIM49CP0CI26 452 aa17.58■□□□□ 0.41
PACS1-201ENST00000320580 KRT4P19013 534 aa17.58■□□□□ 0.41
PACS1-201ENST00000320580 MTM1Q13496 603 aa17.58■□□□□ 0.41
PACS1-201ENST00000320580 LRRC8BQ6P9F7 803 aa17.58■□□□□ 0.41
PACS1-201ENST00000320580 PRPF39Q86UA1 669 aaKnown RBP17.58■□□□□ 0.41
PACS1-201ENST00000320580 PDIK1LQ8N165 341 aa17.58■□□□□ 0.41
PACS1-201ENST00000320580 PSTPIP2Q9H939 334 aa17.58■□□□□ 0.41
PACS1-201ENST00000320580 DTNAQ9Y4J8 743 aa17.58■□□□□ 0.41
PACS1-201ENST00000320580 POTEB3A0JP26 581 aa17.58■□□□□ 0.4
PACS1-201ENST00000320580 RSPH10B2B2RC85 870 aa17.58■□□□□ 0.4
PACS1-201ENST00000320580 POTECB2RU33 542 aa17.58■□□□□ 0.4
PACS1-201ENST00000320580 VIL1P09327 827 aaKnown RBP17.58■□□□□ 0.4
PACS1-201ENST00000320580 RSPH10BP0C881 870 aa17.58■□□□□ 0.4
PACS1-201ENST00000320580 UBE2SQ16763 222 aa17.58■□□□□ 0.4
PACS1-201ENST00000320580 GSTA3Q16772 222 aa17.58■□□□□ 0.4
PACS1-201ENST00000320580 NAALADL2Q58DX5 795 aa17.58■□□□□ 0.4
PACS1-201ENST00000320580 POTEBQ6S5H4 581 aa17.58■□□□□ 0.4
PACS1-201ENST00000320580 B3GNT6Q6ZMB0 384 aa17.58■□□□□ 0.4
PACS1-201ENST00000320580 ATG4AQ8WYN0 398 aa17.58■□□□□ 0.4
PACS1-201ENST00000320580 DYNLL2Q96FJ2 89 aa17.58■□□□□ 0.4
PACS1-201ENST00000320580 ACAP3Q96P50 834 aa17.58■□□□□ 0.4
PACS1-201ENST00000320580 MAD1L1Q9Y6D9 718 aa17.58■□□□□ 0.4
PACS1-201ENST00000320580 ABCB11O95342 1321 aa17.58■□□□□ 0.4
PACS1-201ENST00000320580 KIAA0391O15091 583 aaKnown RBP17.58■□□□□ 0.4
PACS1-201ENST00000320580 EEF1DP29692 281 aaKnown RBP17.58■□□□□ 0.4
PACS1-201ENST00000320580 ARHGAP27Q6ZUM4 889 aa17.58■□□□□ 0.4
PACS1-201ENST00000320580 SERPINI1Q99574 410 aa17.58■□□□□ 0.4
PACS1-201ENST00000320580 SHCBP1LQ9BZQ2 653 aa17.58■□□□□ 0.4
PACS1-201ENST00000320580 TTYH3Q9C0H2 523 aa17.58■□□□□ 0.4
PACS1-201ENST00000320580 OLFML3Q9NRN5 406 aa17.58■□□□□ 0.4
PACS1-201ENST00000320580 ATMINO43313 823 aaPredicted RBP17.57■□□□□ 0.4
PACS1-201ENST00000320580 ANXA13P27216 316 aa17.57■□□□□ 0.4
PACS1-201ENST00000320580 SLC5A9Q2M3M2 681 aa17.57■□□□□ 0.4
PACS1-201ENST00000320580 KHDC1Q4VXA5 237 aaKnown RBP17.57■□□□□ 0.4
PACS1-201ENST00000320580 MIGA2Q7L4E1 593 aa17.57■□□□□ 0.4
PACS1-201ENST00000320580 ARMCX1Q9P291 453 aa17.57■□□□□ 0.4
PACS1-201ENST00000320580 FOXO6A8MYZ6 492 aa17.57■□□□□ 0.4
PACS1-201ENST00000320580 IPO5O00410 1097 aaKnown RBP17.57■□□□□ 0.4
PACS1-201ENST00000320580 CNPY1Q3B7I2 92 aa17.57■□□□□ 0.4
PACS1-201ENST00000320580 ODR4Q5SWX8 454 aa17.57■□□□□ 0.4
PACS1-201ENST00000320580 FRMD5Q7Z6J6 570 aa17.57■□□□□ 0.4
PACS1-201ENST00000320580 MRPL1Q9BYD6 325 aaKnown RBP17.57■□□□□ 0.4
PACS1-201ENST00000320580 SLC13A1Q9BZW2 595 aa17.57■□□□□ 0.4
PACS1-201ENST00000320580 MRPL46Q9H2W6 279 aaKnown RBP17.57■□□□□ 0.4
PACS1-201ENST00000320580 PFDN4Q9NQP4 134 aa17.57■□□□□ 0.4
PACS1-201ENST00000320580 APPL1Q9UKG1 709 aa17.57■□□□□ 0.4
PACS1-201ENST00000320580 RGPD8O14715 1765 aaPredicted RBP17.57■□□□□ 0.4
PACS1-201ENST00000320580 PEX11AO75192 247 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms