RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 Lamtor4Q8CF66 99 aa16.78■□□□□ 0.28
Ubp1-206ENSMUST00000216558 Gnl3Q8CI11 538 aaKnown RBP16.78■□□□□ 0.28
Ubp1-206ENSMUST00000216558 Lrrc45Q8CIM1 670 aa16.78■□□□□ 0.28
Ubp1-206ENSMUST00000216558 Vmn1r191Q8K4D0 298 aa16.78■□□□□ 0.28
Ubp1-206ENSMUST00000216558 Nup58Q8R332 587 aa16.78■□□□□ 0.28
Ubp1-206ENSMUST00000216558 Ppp1r16bQ8VHQ3 568 aa16.78■□□□□ 0.28
Ubp1-206ENSMUST00000216558 Pcdhac2Q91Y09 1006 aa16.78■□□□□ 0.28
Ubp1-206ENSMUST00000216558 Srgap2Q91Z67 1071 aa16.78■□□□□ 0.28
Ubp1-206ENSMUST00000216558 Fam187aQ9D3R5 417 aa16.78■□□□□ 0.28
Ubp1-206ENSMUST00000216558 MesdQ9ERE7 224 aa16.78■□□□□ 0.28
Ubp1-206ENSMUST00000216558 Slc26a3Q9WVC8 757 aa16.78■□□□□ 0.28
Ubp1-206ENSMUST00000216558 Ttc17E9PVB5 1198 aa16.77■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Prpmp5E9PXN1 296 aa16.77■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Vmn2r87E9PZX4 848 aa16.77■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Guca2bO09051 106 aa16.77■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Kpna6O35345 536 aa16.77■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Hoxc8P09025 242 aa16.77■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Tap2P36371 702 aa16.77■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Gfpt1P47856 697 aa16.77■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Nub1P54729 614 aa16.77■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Trim43aQ3TL54 445 aa16.77■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Mief2Q5NCS9 454 aa16.77■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Foxn1Q61575 648 aa16.77■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Taf2Q8C176 1104 aa16.77■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Ttc16Q8C1F5 767 aa16.77■□□□□ 0.27
Ubp1-206ENSMUST00000216558 IntS13Q8QZV7 732 aa16.77■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Ces1fQ91WU0 561 aa16.77■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Ctnnbl1Q9CWL8 563 aaKnown RBP16.77■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Tnfrsf10bQ9QZM4 381 aa16.77■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Ptpn3A2ALK8 913 aa16.76■□□□□ 0.27
Ubp1-206ENSMUST00000216558 SprtnG3X912 497 aa16.76■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Gucy1b3O54865 620 aa16.76■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Tagap1P0CAX8 505 aa16.76■□□□□ 0.27
Ubp1-206ENSMUST00000216558 PuraP42669 321 aaKnown RBP16.76■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Ndufs6P52503 116 aa16.76■□□□□ 0.27
Ubp1-206ENSMUST00000216558 GaaP70699 953 aa16.76■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Fgfr1opQ66JX5 399 aa16.76■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Trib2Q8K4K3 343 aa16.76■□□□□ 0.27
Ubp1-206ENSMUST00000216558 AdarQ99MU3 1178 aaKnown RBP16.76■□□□□ 0.27
Ubp1-206ENSMUST00000216558 MicalclQ9D5U9 680 aa16.76■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Pidd1Q9ERV7 915 aa16.76■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Rfx5Q9JL61 658 aa16.76■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Gon4lQ9DB00 2260 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Spata31d1aE9QA35 1336 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Usp34Q6ZQ93 3582 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 StrnO55106 780 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Cd44P15379 778 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Vamp7P70280 220 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 MmeQ61391 750 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Slc26a2Q62273 739 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Ncapg2Q6DFV1 1138 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Ints2Q80UK8 1198 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Fam49aQ8BHZ0 323 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 VcpkmtQ8C436 228 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Stxbp5Q8K400 1152 aaKnown RBP16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Kcnc4Q8R1C0 628 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Asb7Q91ZU0 318 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Q922R1 422 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Cfap57Q9D180 1249 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 TtpalQ9D3D0 343 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 MsraQ9D6Y7 233 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Rsph3bQ9DA80 389 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Stk4Q9JI11 487 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Rnf14Q9JI90 485 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Fbxo16Q9QZM9 334 aa16.75■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Gm11985A0A1B0GS61 206 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Gm20503G3UZK1 150 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Tnnc2P20801 160 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Xrcc5P27641 732 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Top1Q04750 767 aaKnown RBP16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Grm2Q14BI2 872 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Tatdn3Q3U1C6 294 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Myl6Q60605 151 aaKnown RBP16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 KaznQ69ZS8 779 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 C6.1alQ7M757 291 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Pramel7Q810Y8 479 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 LarsQ8BMJ2 1178 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Chn1Q91V57 459 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 PdclQ9DBX2 301 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Gm28919A0A087WP35 240 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Ankrd16A2AS55 361 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Gm4297D3YWB7 211 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Gm3127E9Q9P5 263 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Gm9857F7CXR1 130 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 4933406M09RikG3XA12 479 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Gm3453K7N724 263 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 XlrP05531 208 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 H2afxP27661 143 aaKnown RBP16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Acsl1P41216 699 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Rmdn3Q3UJU9 470 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Srrm1Q52KI8 946 aaKnown RBP16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 TxlnaQ6PAM1 554 aaKnown RBP16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Spag5Q7TME2 1165 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Aoc2Q812C9 757 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Nim1kQ8BHI9 436 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Il33Q8BVZ5 266 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Q8CEZ4 452 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Rnf34Q99KR6 376 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 Llcfc1Q9D9P8 108 aa16.74■□□□□ 0.27
Ubp1-206ENSMUST00000216558 IvdQ9JHI5 424 aa16.74■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms