RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 ARHGEF6Q15052 776 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 P3H1Q32P28 736 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 MARCH10Q8NA82 808 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-218ENST00000635120 PPHLN1Q8NEY8 458 aaKnown RBP9.63□□□□□ -0.87
CSMD1-218ENST00000635120 LXNQ9BS40 222 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 ANKRD40Q6AI12 368 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 PGBD4Q96DM1 585 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 LY9Q9HBG7 655 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 POLD4Q9HCU8 107 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 BFARQ9NZS9 450 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 SENP1Q9P0U3 644 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 UBA6A0AVT1 1052 aaPredicted RBP9.62□□□□□ -0.87
CSMD1-218ENST00000635120 KRT8P05787 483 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 LRRC36Q1X8D7 754 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 DCAF4L1Q3SXM0 396 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 CDKL3Q8IVW4 592 aaPredicted RBP9.62□□□□□ -0.87
CSMD1-218ENST00000635120 MFN1Q8IWA4 741 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 URGCPQ8TCY9 931 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 INTS2Q9H0H0 1204 aaKnown RBP9.62□□□□□ -0.87
CSMD1-218ENST00000635120 LCP1P13796 627 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 TRIM72Q6ZMU5 477 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 CYFIP1Q7L576 1253 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 SPDYE5A6NIY4 337 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 MAPRE2Q15555 327 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 SPDYE7PQ495Y7 208 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 SNRNP48Q6IEG0 339 aaKnown RBP9.62□□□□□ -0.87
CSMD1-218ENST00000635120 RUBCNQ92622 972 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 RNPC3Q96LT9 517 aaKnown RBP9.62□□□□□ -0.87
CSMD1-218ENST00000635120 KIAA1586Q9HCI6 787 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 ABT1Q9ULW3 272 aaKnown RBP9.62□□□□□ -0.87
CSMD1-218ENST00000635120 EMSYQ7Z589 1322 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 TBC1D4O60343 1298 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 RABGAP1LQ5R372 815 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 RHOT1Q8IXI2 618 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 TMA16Q96EY4 203 aaKnown RBP9.62□□□□□ -0.87
CSMD1-218ENST00000635120 CPVLQ9H3G5 476 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 TXNRD1Q16881 649 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 CEP55Q53EZ4 464 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 BTNL9Q6UXG8 535 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 FAM196AQ6ZSG2 479 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 TTC26A0AVF1 554 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 GGPS1O95749 300 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 HIC1Q14526 733 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 ASIC4Q96FT7 647 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 ZCWPW1Q9H0M4 648 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 PLEKHM3Q6ZWE6 761 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 LONP2Q86WA8 852 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 ARHGAP18Q8N392 663 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 CXorf56Q9H5V9 222 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 ZNF302Q9NR11 478 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 S100A5P33763 92 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 DTX3LQ8TDB6 740 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 SH3GL3Q99963 347 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 LBHD1Q9BQE6 289 aaPredicted RBP9.62□□□□□ -0.87
CSMD1-218ENST00000635120 ASCC2Q9H1I8 757 aaPredicted RBP9.62□□□□□ -0.87
CSMD1-218ENST00000635120 KDM4CQ9H3R0 1056 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 GGT7Q9UJ14 662 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 CLTCL1P53675 1640 aa9.62□□□□□ -0.87
CSMD1-218ENST00000635120 C5orf58C9J3I9 102 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 MAFGO15525 162 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 SPDYAQ5MJ70 313 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 ARHGEF1Q92888 912 aaKnown RBP9.61□□□□□ -0.87
CSMD1-218ENST00000635120 PCDHA6Q9UN73 950 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 PCDHA8Q9Y5H6 950 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 KCNN4O15554 427 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 COPB2P35606 906 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 NKX1-1Q15270 411 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-218ENST00000635120 ACCSLQ4AC99 568 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 ACAP3Q96P50 834 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 STRBPQ96SI9 672 aaKnown RBP9.61□□□□□ -0.87
CSMD1-218ENST00000635120 SIK2Q9H0K1 926 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 PRDM5Q9NQX1 630 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-218ENST00000635120 BSDC1Q9NW68 430 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-218ENST00000635120 HEG1Q9ULI3 1381 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 IQGAP3Q86VI3 1631 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 ENO4A6NNW6 628 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 MYO1GB0I1T2 1018 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 HSPA1AP0DMV8 641 aaKnown RBP9.61□□□□□ -0.87
CSMD1-218ENST00000635120 HSPA1BP0DMV9 641 aaKnown RBP9.61□□□□□ -0.87
CSMD1-218ENST00000635120 ZNF235Q14590 738 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 C6orf10Q5SRN2 563 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 FASTKD5Q7L8L6 764 aaKnown RBP9.61□□□□□ -0.87
CSMD1-218ENST00000635120 ASCC3Q8N3C0 2202 aaKnown RBP9.61□□□□□ -0.87
CSMD1-218ENST00000635120 FAM187AA6NFU0 413 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 DHX34Q14147 1143 aaKnown RBP9.61□□□□□ -0.87
CSMD1-218ENST00000635120 FMR1NBQ8N0W7 255 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-218ENST00000635120 MRPL1Q9BYD6 325 aaKnown RBP9.61□□□□□ -0.87
CSMD1-218ENST00000635120 SELENONQ9NZV5 590 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 CCDC144BQ3MJ40 725 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 CYB5R4Q7L1T6 521 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 KDELC2Q7Z4H8 507 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 TSSK1BQ9BXA7 367 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 ARL2BPQ9Y2Y0 163 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 AATKQ6ZMQ8 1374 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 USP6P35125 1406 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 COG1Q8WTW3 980 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 UNC45AQ9H3U1 944 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 EIF3EP60228 445 aaKnown RBP9.61□□□□□ -0.87
CSMD1-218ENST00000635120 NAA30Q147X3 362 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-218ENST00000635120 ZNF467Q7Z7K2 595 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms