RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 PTPAQ15257 358 aa4.49□□□□□ -1.69
SRP54-214ENST00000630962 FAM214AQ32MH5 1076 aa4.49□□□□□ -1.69
SRP54-214ENST00000630962 ZNF572Q7Z3I7 529 aaPredicted RBP4.49□□□□□ -1.69
SRP54-214ENST00000630962 DDX42Q86XP3 938 aaKnown RBP eCLIP4.49□□□□□ -1.69
SRP54-214ENST00000630962 ULK2Q8IYT8 1036 aa4.49□□□□□ -1.69
SRP54-214ENST00000630962 MDM1Q8TC05 714 aa4.49□□□□□ -1.69
SRP54-214ENST00000630962 CPT1CQ8TCG5 803 aa4.49□□□□□ -1.69
SRP54-214ENST00000630962 TGFBRAP1Q8WUH2 860 aa4.49□□□□□ -1.69
SRP54-214ENST00000630962 LSM14BQ9BX40 385 aaKnown RBP4.49□□□□□ -1.69
SRP54-214ENST00000630962 TRIM8Q9BZR9 551 aa4.49□□□□□ -1.69
SRP54-214ENST00000630962 PRDM12Q9H4Q4 367 aa4.49□□□□□ -1.69
SRP54-214ENST00000630962 NRDE2Q9H7Z3 1164 aa4.49□□□□□ -1.69
SRP54-214ENST00000630962 MMRN2Q9H8L6 949 aa4.49□□□□□ -1.69
SRP54-214ENST00000630962 SPEF1Q9Y4P9 236 aa4.49□□□□□ -1.69
SRP54-214ENST00000630962 SBNO2Q9Y2G9 1366 aa4.49□□□□□ -1.69
SRP54-214ENST00000630962 GRXCR1A8MXD5 290 aa4.48□□□□□ -1.69
SRP54-214ENST00000630962 IGSF3O75054 1194 aa4.48□□□□□ -1.69
SRP54-214ENST00000630962 ALAS1P13196 640 aa4.48□□□□□ -1.69
SRP54-214ENST00000630962 AGXTP21549 392 aa4.48□□□□□ -1.69
SRP54-214ENST00000630962 WASP42768 502 aa4.48□□□□□ -1.69
SRP54-214ENST00000630962 DGCR2P98153 550 aa4.48□□□□□ -1.69
SRP54-214ENST00000630962 SRSF2Q01130 221 aaKnown RBP4.48□□□□□ -1.69
SRP54-214ENST00000630962 TIGD2Q4W5G0 525 aa4.48□□□□□ -1.69
SRP54-214ENST00000630962 PRAMEF14Q5SWL7 426 aa4.48□□□□□ -1.69
SRP54-214ENST00000630962 LRRC55Q6ZSA7 311 aa4.48□□□□□ -1.69
SRP54-214ENST00000630962 GDF7Q7Z4P5 450 aa4.48□□□□□ -1.69
SRP54-214ENST00000630962 ZFPM1Q8IX07 1006 aa4.48□□□□□ -1.69
SRP54-214ENST00000630962 PQLC1Q8N2U9 271 aa4.48□□□□□ -1.69
SRP54-214ENST00000630962 CNTD1Q8N815 330 aa4.48□□□□□ -1.69
SRP54-214ENST00000630962 OR10H5Q8NGA6 315 aa4.48□□□□□ -1.69
SRP54-214ENST00000630962 PGBD4Q96DM1 585 aa4.48□□□□□ -1.69
SRP54-214ENST00000630962 MYEOVQ96EZ4 313 aa4.48□□□□□ -1.69
SRP54-214ENST00000630962 KRTAP4-5Q9BYR2 181 aa4.48□□□□□ -1.69
SRP54-214ENST00000630962 BRINP2Q9C0B6 783 aa4.48□□□□□ -1.69
SRP54-214ENST00000630962 SENP6Q9GZR1 1112 aaPredicted RBP4.48□□□□□ -1.69
SRP54-214ENST00000630962 ZNF277Q9NRM2 450 aaPredicted RBP4.48□□□□□ -1.69
SRP54-214ENST00000630962 ABHD16AO95870 558 aa4.47□□□□□ -1.69
SRP54-214ENST00000630962 GSPT1P15170 499 aaKnown RBP4.47□□□□□ -1.69
SRP54-214ENST00000630962 CDK11BP21127 795 aaKnown RBP4.47□□□□□ -1.69
SRP54-214ENST00000630962 IBSPP21815 317 aaPredicted RBP4.47□□□□□ -1.69
SRP54-214ENST00000630962 ADSLP30566 484 aaPredicted RBP4.47□□□□□ -1.69
SRP54-214ENST00000630962 BMPR1AP36894 532 aa4.47□□□□□ -1.69
SRP54-214ENST00000630962 SLC25A3Q00325 362 aa4.47□□□□□ -1.69
SRP54-214ENST00000630962 NOMO1Q15155 1222 aa4.47□□□□□ -1.69
SRP54-214ENST00000630962 ATXN7L2Q5T6C5 722 aaPredicted RBP4.47□□□□□ -1.69
SRP54-214ENST00000630962 SYDE2Q5VT97 1194 aa4.47□□□□□ -1.69
SRP54-214ENST00000630962 OTUD7BQ6GQQ9 843 aa4.47□□□□□ -1.69
SRP54-214ENST00000630962 PPP4R3AQ6IN85 833 aa4.47□□□□□ -1.69
SRP54-214ENST00000630962 KCNV1Q6PIU1 500 aa4.47□□□□□ -1.69
SRP54-214ENST00000630962 MIGA2Q7L4E1 593 aa4.47□□□□□ -1.69
SRP54-214ENST00000630962 TRMT2AQ8IZ69 625 aaKnown RBP4.47□□□□□ -1.69
SRP54-214ENST00000630962 LILRA3Q8N6C8 439 aaPredicted RBP4.47□□□□□ -1.69
SRP54-214ENST00000630962 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.47□□□□□ -1.69
SRP54-214ENST00000630962 NEU4Q8WWR8 484 aaPredicted RBP4.47□□□□□ -1.69
SRP54-214ENST00000630962 CLIP3Q96DZ5 547 aa4.47□□□□□ -1.69
SRP54-214ENST00000630962 C7orf25Q9BPX7 421 aa4.47□□□□□ -1.69
SRP54-214ENST00000630962 CPEB1Q9BZB8 566 aaKnown RBP4.47□□□□□ -1.69
SRP54-214ENST00000630962 SCAND2PQ9GZW5 306 aaPredicted RBP4.47□□□□□ -1.69
SRP54-214ENST00000630962 SLITRK6Q9H5Y7 841 aa4.47□□□□□ -1.69
SRP54-214ENST00000630962 VTA1Q9NP79 307 aa4.47□□□□□ -1.69
SRP54-214ENST00000630962 MKS1Q9NXB0 559 aa4.47□□□□□ -1.69
SRP54-214ENST00000630962 TRPM5Q9NZQ8 1165 aa4.47□□□□□ -1.69
SRP54-214ENST00000630962 ATP11BQ9Y2G3 1177 aa4.47□□□□□ -1.69
SRP54-214ENST00000630962 ZMYM3Q14202 1370 aa4.47□□□□□ -1.69
SRP54-214ENST00000630962 KLHL33A6NCF5 533 aa4.46□□□□□ -1.7
SRP54-214ENST00000630962 ADCY6O43306 1168 aa4.46□□□□□ -1.7
SRP54-214ENST00000630962 FAM20BO75063 409 aa4.46□□□□□ -1.7
SRP54-214ENST00000630962 POMCP01189 267 aa4.46□□□□□ -1.7
SRP54-214ENST00000630962 ATP5JP18859 108 aa4.46□□□□□ -1.7
SRP54-214ENST00000630962 POU3F3P20264 500 aaPredicted RBP4.46□□□□□ -1.7
SRP54-214ENST00000630962 SREBF1P36956 1147 aa4.46□□□□□ -1.7
SRP54-214ENST00000630962 GUCY2FP51841 1108 aa4.46□□□□□ -1.7
SRP54-214ENST00000630962 NHLH2Q02577 135 aa4.46□□□□□ -1.7
SRP54-214ENST00000630962 CLUL1Q15846 466 aa4.46□□□□□ -1.7
SRP54-214ENST00000630962 SPDYE7PQ495Y7 208 aa4.46□□□□□ -1.7
SRP54-214ENST00000630962 FNDC7Q5VTL7 733 aa4.46□□□□□ -1.7
SRP54-214ENST00000630962 PGM2L1Q6PCE3 622 aa4.46□□□□□ -1.7
SRP54-214ENST00000630962 RHOUQ7L0Q8 258 aa4.46□□□□□ -1.7
SRP54-214ENST00000630962 MRGPRGQ86SM5 289 aa4.46□□□□□ -1.7
SRP54-214ENST00000630962 MRGPREQ86SM8 312 aa4.46□□□□□ -1.7
SRP54-214ENST00000630962 XYLT1Q86Y38 959 aa4.46□□□□□ -1.7
SRP54-214ENST00000630962 NLGN4YQ8NFZ3 816 aaPredicted RBP4.46□□□□□ -1.7
SRP54-214ENST00000630962 SLC2A4RGQ9NR83 387 aa4.46□□□□□ -1.7
SRP54-214ENST00000630962 SHTN1A0MZ66 631 aa4.45□□□□□ -1.7
SRP54-214ENST00000630962 CXorf49A8MYA2 514 aaPredicted RBP4.45□□□□□ -1.7
SRP54-214ENST00000630962 RAMP2O60895 175 aa4.45□□□□□ -1.7
SRP54-214ENST00000630962 SLPIP03973 132 aa4.45□□□□□ -1.7
SRP54-214ENST00000630962 ALOX15P16050 662 aaPredicted RBP4.45□□□□□ -1.7
SRP54-214ENST00000630962 APOBEC3AP31941 199 aaPredicted RBP4.45□□□□□ -1.7
SRP54-214ENST00000630962 GUCY1A2P33402 732 aa4.45□□□□□ -1.7
SRP54-214ENST00000630962 AVPR1BP47901 424 aa4.45□□□□□ -1.7
SRP54-214ENST00000630962 CCT2P78371 535 aaKnown RBP4.45□□□□□ -1.7
SRP54-214ENST00000630962 KLF10Q13118 480 aa4.45□□□□□ -1.7
SRP54-214ENST00000630962 LHFPL2Q6ZUX7 228 aa4.45□□□□□ -1.7
SRP54-214ENST00000630962 Q6ZVL8 140 aa4.45□□□□□ -1.7
SRP54-214ENST00000630962 CMIPQ8IY22 773 aa4.45□□□□□ -1.7
SRP54-214ENST00000630962 PROKR1Q8TCW9 393 aa4.45□□□□□ -1.7
SRP54-214ENST00000630962 COG1Q8WTW3 980 aa4.45□□□□□ -1.7
SRP54-214ENST00000630962 HOXB13Q92826 284 aaPredicted RBP4.45□□□□□ -1.7
SRP54-214ENST00000630962 GPRC5BQ9NZH0 403 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms