RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 AOPEPQ8N6M6 819 aa6.72□□□□□ -1.33
SMAD4-212ENST00000591126 PARD3BQ8TEW8 1205 aa6.72□□□□□ -1.33
SMAD4-212ENST00000591126 SPACA7Q96KW9 195 aa6.72□□□□□ -1.33
SMAD4-212ENST00000591126 CFAP57Q96MR6 1250 aa6.72□□□□□ -1.33
SMAD4-212ENST00000591126 TRPC7Q9HCX4 862 aa6.72□□□□□ -1.33
SMAD4-212ENST00000591126 IRAK4Q9NWZ3 460 aa6.72□□□□□ -1.33
SMAD4-212ENST00000591126 ITGA11Q9UKX5 1188 aa6.72□□□□□ -1.33
SMAD4-212ENST00000591126 SIGLEC1Q9BZZ2 1709 aa6.72□□□□□ -1.33
SMAD4-212ENST00000591126 PGK2P07205 417 aa6.72□□□□□ -1.33
SMAD4-212ENST00000591126 PLCG1P19174 1290 aa6.72□□□□□ -1.33
SMAD4-212ENST00000591126 MAGEA1P43355 309 aa6.72□□□□□ -1.33
SMAD4-212ENST00000591126 OSTNP61366 133 aa6.72□□□□□ -1.33
SMAD4-212ENST00000591126 CCDC144BQ3MJ40 725 aa6.72□□□□□ -1.33
SMAD4-212ENST00000591126 ZPBP2Q6X784 338 aa6.72□□□□□ -1.33
SMAD4-212ENST00000591126 LRRC8DQ7L1W4 858 aa6.72□□□□□ -1.33
SMAD4-212ENST00000591126 RAB44Q7Z6P3 723 aaPredicted RBP6.72□□□□□ -1.33
SMAD4-212ENST00000591126 SAPCD2Q86UD0 394 aa6.72□□□□□ -1.33
SMAD4-212ENST00000591126 IGSF22Q8N9C0 903 aa6.72□□□□□ -1.33
SMAD4-212ENST00000591126 RPGRIP1Q96KN7 1286 aa6.72□□□□□ -1.33
SMAD4-212ENST00000591126 UIMC1Q96RL1 719 aa6.72□□□□□ -1.33
SMAD4-212ENST00000591126 DNPEPQ9ULA0 475 aa6.72□□□□□ -1.33
SMAD4-212ENST00000591126 ZNF536O15090 1300 aa6.72□□□□□ -1.33
SMAD4-212ENST00000591126 KCNJ18B7U540 433 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 CFAP99D6REC4 459 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 SLC16A4O15374 487 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 HIP1RO75146 1068 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 ZC3H11AO75152 810 aaKnown RBP eCLIP6.71□□□□□ -1.33
SMAD4-212ENST00000591126 EOMESO95936 686 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 PFKFB1P16118 471 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 TM4SF4P48230 202 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 VEGFBP49765 207 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 STX17P56962 302 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 LRRC32Q14392 662 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 KCNJ12Q14500 433 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 ANO6Q4KMQ2 910 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 CYB5D1Q6P9G0 228 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 OTOP3Q7RTS5 596 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 OOSP2Q86WS3 158 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 NPAS4Q8IUM7 802 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 RHOT2Q8IXI1 618 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 ASIC4Q96FT7 647 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 SEPT5Q99719 369 aaPredicted RBP6.71□□□□□ -1.33
SMAD4-212ENST00000591126 NT5C1AQ9BXI3 368 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 VPS37BQ9H9H4 285 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 PRDM16Q9HAZ2 1276 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 FAM217BQ9NTX9 383 aaPredicted RBP6.71□□□□□ -1.33
SMAD4-212ENST00000591126 A0A1W2PRG0 241 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 SNAP23O00161 211 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 TOM1L1O75674 476 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 LGALS2P05162 132 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 MX2P20592 715 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 VAMP7P51809 220 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 RTP1P59025 263 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 ZNF677Q86XU0 584 aa6.71□□□□□ -1.33
SMAD4-212ENST00000591126 GUF1Q8N442 669 aaKnown RBP6.71□□□□□ -1.33
SMAD4-212ENST00000591126 C2orf15Q8WU43 125 aaKnown RBP6.71□□□□□ -1.33
SMAD4-212ENST00000591126 AGO4Q9HCK5 861 aaKnown RBP6.71□□□□□ -1.33
SMAD4-212ENST00000591126 GFPT2O94808 682 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 RB1P06400 928 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 FAM200BP0CF97 657 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 SETSIPP0DME0 302 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 GSPT1P15170 499 aaKnown RBP6.71□□□□□ -1.34
SMAD4-212ENST00000591126 GRIK3Q13003 919 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 TTC31Q49AM3 519 aaPredicted RBP6.71□□□□□ -1.34
SMAD4-212ENST00000591126 FRMD5Q7Z6J6 570 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 C11orf74Q86VG3 221 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 FBXL13Q8NEE6 735 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 OR8K1Q8NGG5 319 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 ASAP3Q8TDY4 903 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 SPIRE2Q8WWL2 714 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 CDCA3Q99618 268 aaPredicted RBP6.71□□□□□ -1.34
SMAD4-212ENST00000591126 RAB17Q9H0T7 212 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 SLC39A2Q9NP94 309 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 A1CFQ9NQ94 594 aaKnown RBP6.71□□□□□ -1.34
SMAD4-212ENST00000591126 TLR8Q9NR97 1041 aaKnown RBP6.71□□□□□ -1.34
SMAD4-212ENST00000591126 CYP39A1Q9NYL5 469 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 PLA2G4CQ9UP65 541 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 A0A087WZ62 844 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 GLUD1P00367 558 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 KRT7P08729 469 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 CSH1P0DML2 217 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 CSH2P0DML3 217 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 KARSQ15046 597 aaKnown RBP6.71□□□□□ -1.34
SMAD4-212ENST00000591126 C8orf34Q49A92 452 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 ZC3H14Q6PJT7 736 aaKnown RBP6.71□□□□□ -1.34
SMAD4-212ENST00000591126 TMCO3Q6UWJ1 677 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 MTSS1LQ765P7 747 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 CPA6Q8N4T0 437 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 NSRP1Q9H0G5 558 aaKnown RBP6.71□□□□□ -1.34
SMAD4-212ENST00000591126 DDX56Q9NY93 547 aaKnown RBP6.71□□□□□ -1.34
SMAD4-212ENST00000591126 CWC15Q9P013 229 aaKnown RBP6.71□□□□□ -1.34
SMAD4-212ENST00000591126 TBC1D14Q9P2M4 693 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 MAFFQ9ULX9 164 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 AGAP1Q9UPQ3 857 aa6.71□□□□□ -1.34
SMAD4-212ENST00000591126 MCF2LO15068 1137 aa6.7□□□□□ -1.34
SMAD4-212ENST00000591126 POLR3GO15318 223 aaPredicted RBP6.7□□□□□ -1.34
SMAD4-212ENST00000591126 NDUFS2O75306 463 aa6.7□□□□□ -1.34
SMAD4-212ENST00000591126 HSPA8P11142 646 aaKnown RBP6.7□□□□□ -1.34
SMAD4-212ENST00000591126 CKBP12277 381 aa6.7□□□□□ -1.34
SMAD4-212ENST00000591126 INSRRP14616 1297 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms