RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 TRIML1Q8N9V2 468 aa20.89■□□□□ 0.93
DDX39A-214ENST00000590556 GOLGA5Q8TBA6 731 aa20.89■□□□□ 0.93
DDX39A-214ENST00000590556 SP7Q8TDD2 431 aaPredicted RBP20.89■□□□□ 0.93
DDX39A-214ENST00000590556 GAD1Q99259 594 aa20.89■□□□□ 0.93
DDX39A-214ENST00000590556 CBWD1Q9BRT8 395 aa20.89■□□□□ 0.93
DDX39A-214ENST00000590556 NKX2-4Q9H2Z4 354 aa20.89■□□□□ 0.93
DDX39A-214ENST00000590556 AGPAT3Q9NRZ7 376 aa20.89■□□□□ 0.93
DDX39A-214ENST00000590556 CGNQ9P2M7 1197 aaKnown RBP20.89■□□□□ 0.93
DDX39A-214ENST00000590556 MLH1P40692 756 aa20.88■□□□□ 0.93
DDX39A-214ENST00000590556 PRCPP42785 496 aa20.88■□□□□ 0.93
DDX39A-214ENST00000590556 COBLL1Q53SF7 1204 aa20.88■□□□□ 0.93
DDX39A-214ENST00000590556 TIFAQ96CG3 184 aa20.88■□□□□ 0.93
DDX39A-214ENST00000590556 ZFP42Q96MM3 310 aa20.88■□□□□ 0.93
DDX39A-214ENST00000590556 MRPL9Q9BYD2 267 aaKnown RBP20.88■□□□□ 0.93
DDX39A-214ENST00000590556 KCTD10Q9H3F6 313 aa20.88■□□□□ 0.93
DDX39A-214ENST00000590556 PCIF1Q9H4Z3 704 aa20.88■□□□□ 0.93
DDX39A-214ENST00000590556 TOPORSQ9NS56 1045 aaPredicted RBP20.88■□□□□ 0.93
DDX39A-214ENST00000590556 TYW1Q9NV66 732 aaKnown RBP20.88■□□□□ 0.93
DDX39A-214ENST00000590556 COL4A6Q14031 1691 aa20.88■□□□□ 0.93
DDX39A-214ENST00000590556 SOX1O00570 391 aaPredicted RBP20.87■□□□□ 0.93
DDX39A-214ENST00000590556 PDXKO00764 312 aa20.87■□□□□ 0.93
DDX39A-214ENST00000590556 KIAA0391O15091 583 aaKnown RBP20.87■□□□□ 0.93
DDX39A-214ENST00000590556 CLIC2O15247 247 aa20.87■□□□□ 0.93
DDX39A-214ENST00000590556 FAM189A1O60320 539 aa20.87■□□□□ 0.93
DDX39A-214ENST00000590556 BMP6P22004 513 aa20.87■□□□□ 0.93
DDX39A-214ENST00000590556 ACOT2P49753 483 aa20.87■□□□□ 0.93
DDX39A-214ENST00000590556 STIM1Q13586 685 aa20.87■□□□□ 0.93
DDX39A-214ENST00000590556 ZBTB41Q5SVQ8 909 aa20.87■□□□□ 0.93
DDX39A-214ENST00000590556 CCDC183Q5T5S1 534 aa20.87■□□□□ 0.93
DDX39A-214ENST00000590556 SAAL1Q96ER3 474 aa20.87■□□□□ 0.93
DDX39A-214ENST00000590556 RPS6KC1Q96S38 1066 aa20.87■□□□□ 0.93
DDX39A-214ENST00000590556 SLC28A3Q9HAS3 691 aa20.87■□□□□ 0.93
DDX39A-214ENST00000590556 KANSL3Q9P2N6 904 aa20.87■□□□□ 0.93
DDX39A-214ENST00000590556 LINC01553A4QN01 128 aa20.86■□□□□ 0.93
DDX39A-214ENST00000590556 INPPL1O15357 1258 aa20.86■□□□□ 0.93
DDX39A-214ENST00000590556 CALUO43852 315 aaPredicted RBP20.86■□□□□ 0.93
DDX39A-214ENST00000590556 LDHAP00338 332 aaKnown RBP20.86■□□□□ 0.93
DDX39A-214ENST00000590556 POMCP01189 267 aa20.86■□□□□ 0.93
DDX39A-214ENST00000590556 TNFSF9P41273 254 aa20.86■□□□□ 0.93
DDX39A-214ENST00000590556 AFF1P51825 1210 aaKnown RBP20.86■□□□□ 0.93
DDX39A-214ENST00000590556 RNASELQ05823 741 aaKnown RBP20.86■□□□□ 0.93
DDX39A-214ENST00000590556 LRRC55Q6ZSA7 311 aa20.86■□□□□ 0.93
DDX39A-214ENST00000590556 ADSSL1Q8N142 457 aa20.86■□□□□ 0.93
DDX39A-214ENST00000590556 LRRC43Q8N309 656 aa20.86■□□□□ 0.93
DDX39A-214ENST00000590556 NOC3LQ8WTT2 800 aaKnown RBP20.86■□□□□ 0.93
DDX39A-214ENST00000590556 FAM213AQ9BRX8 229 aa20.86■□□□□ 0.93
DDX39A-214ENST00000590556 RPF1Q9H9Y2 349 aaKnown RBP20.86■□□□□ 0.93
DDX39A-214ENST00000590556 TBC1D13Q9NVG8 400 aa20.86■□□□□ 0.93
DDX39A-214ENST00000590556 HSPBP1Q9NZL4 362 aa20.86■□□□□ 0.93
DDX39A-214ENST00000590556 CPSF3Q9UKF6 684 aaKnown RBP20.86■□□□□ 0.93
DDX39A-214ENST00000590556 MRPL42Q9Y6G3 142 aaKnown RBP20.86■□□□□ 0.93
DDX39A-214ENST00000590556 CITO14578 2027 aa20.86■□□□□ 0.93
DDX39A-214ENST00000590556 LAMA2P24043 3122 aaKnown RBP20.85■□□□□ 0.93
DDX39A-214ENST00000590556 GOLGA8IPA6NC78 632 aa20.85■□□□□ 0.93
DDX39A-214ENST00000590556 GOLGA8JA6NMD2 632 aa20.85■□□□□ 0.93
DDX39A-214ENST00000590556 EXTL3O43909 919 aa20.85■□□□□ 0.93
DDX39A-214ENST00000590556 PPP1R2P41236 205 aa20.85■□□□□ 0.93
DDX39A-214ENST00000590556 SCNN1GP51170 649 aa20.85■□□□□ 0.93
DDX39A-214ENST00000590556 CYP2J2P51589 502 aa20.85■□□□□ 0.93
DDX39A-214ENST00000590556 KLHL40Q2TBA0 621 aa20.85■□□□□ 0.93
DDX39A-214ENST00000590556 SLC10A6Q3KNW5 377 aa20.85■□□□□ 0.93
DDX39A-214ENST00000590556 SPOUT1Q5T280 376 aaKnown RBP20.85■□□□□ 0.93
DDX39A-214ENST00000590556 PPP2R2DQ66LE6 453 aa20.85■□□□□ 0.93
DDX39A-214ENST00000590556 C12orf56Q8IXR9 622 aa20.85■□□□□ 0.93
DDX39A-214ENST00000590556 SYAP1Q96A49 352 aaPredicted RBP20.85■□□□□ 0.93
DDX39A-214ENST00000590556 SNX27Q96L92 541 aa20.85■□□□□ 0.93
DDX39A-214ENST00000590556 MIOSQ9NXC5 875 aa20.85■□□□□ 0.93
DDX39A-214ENST00000590556 TRIP11Q15643 1979 aa20.85■□□□□ 0.93
DDX39A-214ENST00000590556 PSMA7O14818 248 aa20.84■□□□□ 0.93
DDX39A-214ENST00000590556 ARHGEF15O94989 841 aa20.84■□□□□ 0.93
DDX39A-214ENST00000590556 CXCL8P10145 99 aa20.84■□□□□ 0.93
DDX39A-214ENST00000590556 TAP1Q03518 808 aa20.84■□□□□ 0.93
DDX39A-214ENST00000590556 ENOX2Q16206 610 aaKnown RBP20.84■□□□□ 0.93
DDX39A-214ENST00000590556 CAVIN1Q6NZI2 390 aaKnown RBP20.84■□□□□ 0.93
DDX39A-214ENST00000590556 CRELD2Q6UXH1 353 aaPredicted RBP20.84■□□□□ 0.93
DDX39A-214ENST00000590556 ALKAL1Q6UXT8 129 aa20.84■□□□□ 0.93
DDX39A-214ENST00000590556 GPD1LQ8N335 351 aa20.84■□□□□ 0.93
DDX39A-214ENST00000590556 GSTCDQ8NEC7 633 aa20.84■□□□□ 0.93
DDX39A-214ENST00000590556 ZSWIM2Q8NEG5 633 aa20.84■□□□□ 0.93
DDX39A-214ENST00000590556 DHTKD1Q96HY7 919 aaPredicted RBP20.84■□□□□ 0.93
DDX39A-214ENST00000590556 LRCH3Q96II8 777 aa20.84■□□□□ 0.93
DDX39A-214ENST00000590556 CXCL16Q9H2A7 254 aa20.84■□□□□ 0.93
DDX39A-214ENST00000590556 SEMA6BQ9H3T3 888 aa20.84■□□□□ 0.93
DDX39A-214ENST00000590556 PLEKHA5Q9HAU0 1116 aa20.84■□□□□ 0.93
DDX39A-214ENST00000590556 KIAA1586Q9HCI6 787 aa20.84■□□□□ 0.93
DDX39A-214ENST00000590556 TMEM63CQ9P1W3 806 aa20.84■□□□□ 0.93
DDX39A-214ENST00000590556 TRAF3IP3Q9Y228 551 aa20.84■□□□□ 0.93
DDX39A-214ENST00000590556 TDRD15B5MCY1 1934 aaKnown RBP20.83■□□□□ 0.93
DDX39A-214ENST00000590556 PPP1R3GB7ZBB8 358 aa20.83■□□□□ 0.93
DDX39A-214ENST00000590556 PTGESO14684 152 aa20.83■□□□□ 0.93
DDX39A-214ENST00000590556 MEFVO15553 781 aaPredicted RBP20.83■□□□□ 0.93
DDX39A-214ENST00000590556 NR3C1P04150 777 aa20.83■□□□□ 0.93
DDX39A-214ENST00000590556 CD44P16070 742 aaKnown RBP20.83■□□□□ 0.93
DDX39A-214ENST00000590556 POU5F1Q01860 360 aaKnown RBP20.83■□□□□ 0.93
DDX39A-214ENST00000590556 PPP2R3AQ06190 1150 aa20.83■□□□□ 0.93
DDX39A-214ENST00000590556 GRIK3Q13003 919 aa20.83■□□□□ 0.93
DDX39A-214ENST00000590556 HSP90AA2PQ14568 343 aaPredicted RBP20.83■□□□□ 0.93
DDX39A-214ENST00000590556 SKOR2Q2VWA4 1001 aaPredicted RBP20.83■□□□□ 0.93
DDX39A-214ENST00000590556 XKR4Q5GH76 650 aa20.83■□□□□ 0.93
DDX39A-214ENST00000590556 KLHL10Q6JEL2 608 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms