RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 NT5DC4Q86YG4 428 aa11.47□□□□□ -0.57
NEDD4L-224ENST00000588712 BRSK2Q8IWQ3 736 aa11.47□□□□□ -0.57
NEDD4L-224ENST00000588712 OR8K1Q8NGG5 319 aa11.47□□□□□ -0.57
NEDD4L-224ENST00000588712 CAGE1Q8TC20 777 aa11.47□□□□□ -0.57
NEDD4L-224ENST00000588712 CCDC127Q96BQ5 260 aa11.47□□□□□ -0.57
NEDD4L-224ENST00000588712 CCDC94Q9BW85 323 aaPredicted RBP11.47□□□□□ -0.57
NEDD4L-224ENST00000588712 CRISPLD2Q9H0B8 497 aa11.47□□□□□ -0.57
NEDD4L-224ENST00000588712 RPF1Q9H9Y2 349 aaKnown RBP11.47□□□□□ -0.57
NEDD4L-224ENST00000588712 AGPAT5Q9NUQ2 364 aa11.47□□□□□ -0.57
NEDD4L-224ENST00000588712 ZNHIT6Q9NWK9 470 aaKnown RBP11.47□□□□□ -0.57
NEDD4L-224ENST00000588712 CDY2AQ9Y6F7 541 aa11.47□□□□□ -0.57
NEDD4L-224ENST00000588712 RPS6KA5O75582 802 aa11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 EDN1P05305 212 aa11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 ADRB2P07550 413 aa11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 HSPA1AP0DMV8 641 aaKnown RBP11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 HSPA1BP0DMV9 641 aaKnown RBP11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 TNNI1P19237 187 aa11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 CASP14P31944 242 aa11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 MXI1P50539 228 aa11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 CDK7P50613 346 aa11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 BFSP2Q13515 415 aa11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 SMYD5Q6GMV2 418 aa11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 CRELD2Q6UXH1 353 aaPredicted RBP11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 CACNA2D4Q7Z3S7 1137 aa11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 WDR49Q8IV35 697 aa11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 HACE1Q8IYU2 909 aa11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 TRIM6Q9C030 488 aaPredicted RBP11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 SENP6Q9GZR1 1112 aaPredicted RBP11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 HAPLN2Q9GZV7 340 aa11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 CDT1Q9H211 546 aa11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 ASB7Q9H672 318 aa11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 PLEKHA5Q9HAU0 1116 aa11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 CDHR5Q9HBB8 845 aa11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 GCNT4Q9P109 453 aa11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 CEP72Q9P209 647 aa11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 MYO6Q9UM54 1294 aa11.46□□□□□ -0.57
NEDD4L-224ENST00000588712 LRRIQ3A6PVS8 624 aaPredicted RBP11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 FAM189A1O60320 539 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 MFAP3LO75121 409 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 ZC3H11AO75152 810 aaKnown RBP eCLIP11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 GYPCP04921 128 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 DLATP10515 647 aaKnown RBP11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 HARSP12081 509 aaKnown RBP11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 GRM5P41594 1212 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 KCNMA1Q12791 1236 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 C1orf53Q5VUE5 145 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 THNSL1Q8IYQ7 743 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 EHBP1Q8NDI1 1231 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 U2AF1L4Q8WU68 220 aaKnown RBP11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 PPP1R13LQ8WUF5 828 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 CACTINQ8WUQ7 758 aaKnown RBP11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 CPLX3Q8WVH0 158 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 ACAP3Q96P50 834 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 CGRRF1Q99675 332 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 TOPORSQ9NS56 1045 aaPredicted RBP11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 USP20Q9Y2K6 914 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 COQ4Q9Y3A0 265 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 TTC26A0AVF1 554 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 TTLL13PA6NNM8 815 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 B4GALT4O60513 344 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 CSDE1O75534 798 aaKnown RBP11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 TRIM49P0CI25 452 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 TRIM49CP0CI26 452 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 STAG3L1P0CL83 205 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 ZSCAN20P17040 1043 aaPredicted RBP11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 PON1P27169 355 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 HOXA11P31270 313 aaPredicted RBP11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 KRT9P35527 623 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 YARSP54577 528 aaKnown RBP11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 DLG4P78352 724 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 MGAT3Q09327 533 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 ARID5BQ14865 1188 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 DUOXA2Q1HG44 320 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 TC2NQ8N9U0 490 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 FBXL13Q8NEE6 735 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 SYN2Q92777 582 aaPredicted RBP11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 CPB2Q96IY4 423 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 LSM14BQ9BX40 385 aaKnown RBP11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 TMEM117Q9H0C3 514 aa11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 FAM207AQ9NSI2 230 aaPredicted RBP11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 TRMT13Q9NUP7 481 aaKnown RBP11.45□□□□□ -0.58
NEDD4L-224ENST00000588712 PARNO95453 639 aaKnown RBP11.44□□□□□ -0.58
NEDD4L-224ENST00000588712 CHRNA1P02708 482 aa11.44□□□□□ -0.58
NEDD4L-224ENST00000588712 CCDC172P0C7W6 258 aa11.44□□□□□ -0.58
NEDD4L-224ENST00000588712 SKIP12755 728 aa11.44□□□□□ -0.58
NEDD4L-224ENST00000588712 GJA8P48165 433 aa11.44□□□□□ -0.58
NEDD4L-224ENST00000588712 GCLMP48507 274 aa11.44□□□□□ -0.58
NEDD4L-224ENST00000588712 PPP3CAQ08209 521 aa11.44□□□□□ -0.58
NEDD4L-224ENST00000588712 CBWD6Q4V339 395 aa11.44□□□□□ -0.58
NEDD4L-224ENST00000588712 CBWD3Q5JTY5 395 aa11.44□□□□□ -0.58
NEDD4L-224ENST00000588712 CBWD5Q5RIA9 395 aa11.44□□□□□ -0.58
NEDD4L-224ENST00000588712 KLHDC7AQ5VTJ3 777 aa11.44□□□□□ -0.58
NEDD4L-224ENST00000588712 EEF1DP3Q658K8 133 aa11.44□□□□□ -0.58
NEDD4L-224ENST00000588712 TRIM65Q6PJ69 517 aa11.44□□□□□ -0.58
NEDD4L-224ENST00000588712 TMEM40Q8WWA1 233 aa11.44□□□□□ -0.58
NEDD4L-224ENST00000588712 TOX2Q96NM4 488 aa11.44□□□□□ -0.58
NEDD4L-224ENST00000588712 DNAJC7Q99615 494 aa11.44□□□□□ -0.58
NEDD4L-224ENST00000588712 BAG1Q99933 345 aaPredicted RBP11.44□□□□□ -0.58
NEDD4L-224ENST00000588712 CRACR2AQ9BSW2 395 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms