RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 KNSTRNQ9Y448 316 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 PSME4Q14997 1843 aa6.73□□□□□ -1.33
SF3B3-214ENST00000572365 DDX60Q8IY21 1712 aaKnown RBP6.73□□□□□ -1.33
SF3B3-214ENST00000572365 CCL15-CCL14A0A0B4J2E2 113 aa6.73□□□□□ -1.33
SF3B3-214ENST00000572365 ZC3H12DA2A288 527 aaKnown RBP6.73□□□□□ -1.33
SF3B3-214ENST00000572365 F8W031 263 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-214ENST00000572365 BUB1BO60566 1050 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-214ENST00000572365 LTFP02788 710 aa6.73□□□□□ -1.33
SF3B3-214ENST00000572365 C4BPAP04003 597 aaKnown RBP6.73□□□□□ -1.33
SF3B3-214ENST00000572365 CYP17A1P05093 508 aa6.73□□□□□ -1.33
SF3B3-214ENST00000572365 PTPN1P18031 435 aaKnown RBP6.73□□□□□ -1.33
SF3B3-214ENST00000572365 SLC9A1P19634 815 aa6.73□□□□□ -1.33
SF3B3-214ENST00000572365 MAGEA10P43363 369 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-214ENST00000572365 RPS8P62241 208 aaKnown RBP6.73□□□□□ -1.33
SF3B3-214ENST00000572365 SLC9A5Q14940 896 aa6.73□□□□□ -1.33
SF3B3-214ENST00000572365 TTF1Q15361 905 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-214ENST00000572365 TERF2Q15554 542 aa6.73□□□□□ -1.33
SF3B3-214ENST00000572365 CCL15Q16663 113 aa6.73□□□□□ -1.33
SF3B3-214ENST00000572365 PARP10Q53GL7 1025 aa6.73□□□□□ -1.33
SF3B3-214ENST00000572365 BROXQ5VW32 411 aa6.73□□□□□ -1.33
SF3B3-214ENST00000572365 RPTNQ6XPR3 784 aa6.73□□□□□ -1.33
SF3B3-214ENST00000572365 COPS6Q7L5N1 327 aa6.73□□□□□ -1.33
SF3B3-214ENST00000572365 U2AF1L4Q8WU68 220 aaKnown RBP6.73□□□□□ -1.33
SF3B3-214ENST00000572365 TSPAN17Q96FV3 270 aa6.73□□□□□ -1.33
SF3B3-214ENST00000572365 INTS4Q96HW7 963 aaKnown RBP6.73□□□□□ -1.33
SF3B3-214ENST00000572365 GDF15Q99988 308 aa6.73□□□□□ -1.33
SF3B3-214ENST00000572365 CCDC8Q9H0W5 538 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-214ENST00000572365 RXFP1Q9HBX9 757 aa6.73□□□□□ -1.33
SF3B3-214ENST00000572365 REV3LO60673 3130 aa6.73□□□□□ -1.33
SF3B3-214ENST00000572365 SPEF2Q9C093 1822 aa6.73□□□□□ -1.33
SF3B3-214ENST00000572365 RPTORQ8N122 1335 aa6.73□□□□□ -1.33
SF3B3-214ENST00000572365 GABRDO14764 452 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 MARCH6O60337 910 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 PARNO95453 639 aaKnown RBP6.72□□□□□ -1.33
SF3B3-214ENST00000572365 GJB1P08034 283 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 SDHAP31040 664 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 PSMC4P43686 418 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 MAPKAPK2P49137 400 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 EPHB1P54762 984 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 EIF4A1P60842 406 aaKnown RBP6.72□□□□□ -1.33
SF3B3-214ENST00000572365 ERVK-21P61565 698 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 LRRC32Q14392 662 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 BTBD8Q5XKL5 378 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 ARRDC4Q8NCT1 418 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 RAET1EQ8TD07 263 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 DEFB118Q96PH6 123 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 KRTAP9-2Q9BYQ4 174 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 SLC6A17Q9H1V8 727 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 ZMAT4Q9H898 229 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 VEZTQ9HBM0 779 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 VTA1Q9NP79 307 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 TOMM22Q9NS69 142 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 TRHDEQ9UKU6 1024 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 G3BP2Q9UN86 482 aaKnown RBP6.72□□□□□ -1.33
SF3B3-214ENST00000572365 GABRQQ9UN88 632 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 JAG2Q9Y219 1238 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 RIPOR2Q9Y4F9 1068 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 LRRC37AA6NMS7 1700 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 MGAMO43451 1857 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 SH3TC1Q8TE82 1336 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 DLG5Q8TDM6 1919 aa6.72□□□□□ -1.33
SF3B3-214ENST00000572365 OTOFQ9HC10 1997 aa6.71□□□□□ -1.33
SF3B3-214ENST00000572365 ZNF646O15015 1829 aaPredicted RBP6.71□□□□□ -1.33
SF3B3-214ENST00000572365 SSC5DA1L4H1 1573 aa6.71□□□□□ -1.34
SF3B3-214ENST00000572365 NUDT19A8MXV4 375 aa6.71□□□□□ -1.34
SF3B3-214ENST00000572365 ACOT7O00154 380 aa6.71□□□□□ -1.34
SF3B3-214ENST00000572365 SDHBP21912 280 aa6.71□□□□□ -1.34
SF3B3-214ENST00000572365 PTX3P26022 381 aaPredicted RBP6.71□□□□□ -1.34
SF3B3-214ENST00000572365 LSP1P33241 339 aa6.71□□□□□ -1.34
SF3B3-214ENST00000572365 PLA2G5P39877 138 aa6.71□□□□□ -1.34
SF3B3-214ENST00000572365 FNTBP49356 437 aa6.71□□□□□ -1.34
SF3B3-214ENST00000572365 YBX1P67809 324 aaKnown RBP6.71□□□□□ -1.34
SF3B3-214ENST00000572365 PRR5P85299 388 aa6.71□□□□□ -1.34
SF3B3-214ENST00000572365 TMEM62Q0P6H9 643 aa6.71□□□□□ -1.34
SF3B3-214ENST00000572365 KIF22Q14807 665 aa6.71□□□□□ -1.34
SF3B3-214ENST00000572365 INAVAQ3KP66 663 aa6.71□□□□□ -1.34
SF3B3-214ENST00000572365 DACT2Q5SW24 774 aa6.71□□□□□ -1.34
SF3B3-214ENST00000572365 CATSPEREQ5SY80 951 aa6.71□□□□□ -1.34
SF3B3-214ENST00000572365 ADGRF1Q5T601 910 aa6.71□□□□□ -1.34
SF3B3-214ENST00000572365 RASSF3Q86WH2 238 aa6.71□□□□□ -1.34
SF3B3-214ENST00000572365 CBARPQ8N350 705 aaPredicted RBP6.71□□□□□ -1.34
SF3B3-214ENST00000572365 ZNF610Q8N9Z0 462 aa6.71□□□□□ -1.34
SF3B3-214ENST00000572365 C16orf92Q96LL3 132 aa6.71□□□□□ -1.34
SF3B3-214ENST00000572365 RIC8BQ9NVN3 520 aa6.71□□□□□ -1.34
SF3B3-214ENST00000572365 KLHL14Q9P2G3 628 aa6.71□□□□□ -1.34
SF3B3-214ENST00000572365 SPEF1Q9Y4P9 236 aa6.71□□□□□ -1.34
SF3B3-214ENST00000572365 NCOR1O75376 2440 aa6.71□□□□□ -1.34
SF3B3-214ENST00000572365 AK9Q5TCS8 1911 aa6.7□□□□□ -1.34
SF3B3-214ENST00000572365 A0A1W2PPC1 479 aa6.7□□□□□ -1.34
SF3B3-214ENST00000572365 OR14I1A6ND48 311 aa6.7□□□□□ -1.34
SF3B3-214ENST00000572365 FBXO21O94952 628 aa6.7□□□□□ -1.34
SF3B3-214ENST00000572365 SGPL1O95470 568 aa6.7□□□□□ -1.34
SF3B3-214ENST00000572365 NEK2P51955 445 aa6.7□□□□□ -1.34
SF3B3-214ENST00000572365 HERVK_113P62684 666 aa6.7□□□□□ -1.34
SF3B3-214ENST00000572365 MCL1Q07820 350 aa6.7□□□□□ -1.34
SF3B3-214ENST00000572365 TMEM132BQ14DG7 1078 aa6.7□□□□□ -1.34
SF3B3-214ENST00000572365 RAB3GAP1Q15042 981 aa6.7□□□□□ -1.34
SF3B3-214ENST00000572365 ARHGEF6Q15052 776 aa6.7□□□□□ -1.34
SF3B3-214ENST00000572365 PLEKHN1Q494U1 663 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-214ENST00000572365 TTLL5Q6EMB2 1281 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms