RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-223	ENST00000556142	GPC3	P51654	580 aa		10.27	□□□□□ -0.76
HNRNPC-223	ENST00000556142	CLCN3	P51790	818 aa		10.27	□□□□□ -0.76
HNRNPC-223	ENST00000556142	KLHL30	Q0D2K2	578 aa		10.27	□□□□□ -0.76
HNRNPC-223	ENST00000556142	DRAP1	Q14919	205 aa	Predicted RBP	10.27	□□□□□ -0.76
HNRNPC-223	ENST00000556142	SLC18A3	Q16572	532 aa		10.27	□□□□□ -0.76
HNRNPC-223	ENST00000556142	ARHGAP29	Q52LW3	1261 aa		10.27	□□□□□ -0.76
HNRNPC-223	ENST00000556142	ZBTB41	Q5SVQ8	909 aa		10.27	□□□□□ -0.76
HNRNPC-223	ENST00000556142	MARCH8	Q5T0T0	291 aa		10.27	□□□□□ -0.76
HNRNPC-223	ENST00000556142	KRT39	Q6A163	491 aa		10.27	□□□□□ -0.76
HNRNPC-223	ENST00000556142	MTHFD1L	Q6UB35	978 aa		10.27	□□□□□ -0.76
HNRNPC-223	ENST00000556142	SLC35F6	Q8N357	371 aa		10.27	□□□□□ -0.76
HNRNPC-223	ENST00000556142	KAT2B	Q92831	832 aa		10.27	□□□□□ -0.76
HNRNPC-223	ENST00000556142	JAKMIP2	Q96AA8	810 aa		10.27	□□□□□ -0.76
HNRNPC-223	ENST00000556142	BICD1	Q96G01	975 aa		10.27	□□□□□ -0.76
HNRNPC-223	ENST00000556142	SPAG5	Q96R06	1193 aa		10.27	□□□□□ -0.76
HNRNPC-223	ENST00000556142	C2orf40	Q9H1Z8	148 aa		10.27	□□□□□ -0.76
HNRNPC-223	ENST00000556142	TUT1	Q9H6E5	874 aa	Known RBP	10.27	□□□□□ -0.76
HNRNPC-223	ENST00000556142	IFT122	Q9HBG6	1241 aa		10.27	□□□□□ -0.76
HNRNPC-223	ENST00000556142	TOPORS	Q9NS56	1045 aa	Predicted RBP	10.27	□□□□□ -0.76
HNRNPC-223	ENST00000556142	BZW2	Q9Y6E2	419 aa	Known RBP	10.27	□□□□□ -0.76
HNRNPC-223	ENST00000556142		A0A087X0T9	212 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	ACKR2	O00590	384 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	DYNC1LI2	O43237	492 aa	Predicted RBP	10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	AKR1B10	O60218	316 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	KIF5C	O60282	957 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	ECM2	O94769	699 aa	Predicted RBP	10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	PRKCB	P05771	671 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	FAM228B	P0C875	321 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	PNMA6A	P0CW24	399 aa	Predicted RBP	10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	FER	P16591	822 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	ANXA13	P27216	316 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	CYP2C19	P33261	490 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	PTK2	Q05397	1052 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	MBTD1	Q05BQ5	628 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	MCL1	Q07820	350 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	KIF22	Q14807	665 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	SPA17	Q15506	151 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	DGKD	Q16760	1214 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	FAM187B	Q17R55	369 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	ZNF569	Q5MCW4	686 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	TSHZ1	Q6ZSZ6	1077 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	SV2A	Q7L0J3	742 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	RHPN2	Q8IUC4	686 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	ZBTB8OS	Q8IWT0	167 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	SLC30A5	Q8TAD4	765 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	HELQ	Q8TDG4	1101 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	TAS1R2	Q8TE23	839 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	SOCS4	Q8WXH5	440 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	VTI1A	Q96AJ9	217 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	CCDC127	Q96BQ5	260 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	APBA2	Q99767	749 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	MRPL4	Q9BYD3	311 aa	Known RBP	10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	MINDY3	Q9H8M7	445 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142		Q9Y3F1	56 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	DUSP10	Q9Y6W6	482 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	HAS3	O00219	553 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	FOXN3	O00409	490 aa	Predicted RBP	10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	EVI5	O60447	810 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	TOM1L1	O75674	476 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	GFPT2	O94808	682 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	IQCF3	P0C7M6	154 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	ACOT2	P49753	483 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	MNX1	P50219	401 aa	Predicted RBP	10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	IGBP1	P78318	339 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	IRX5	P78411	483 aa	Predicted RBP	10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	ARID5A	Q03989	594 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	CETN1	Q12798	172 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	TFDP1	Q14186	410 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	MAPK6	Q16659	721 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	AMHR2	Q16671	573 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	TDRD12	Q587J7	1177 aa	Known RBP	10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	CCDC122	Q5T0U0	273 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	KIAA1328	Q86T90	577 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	TRPV1	Q8NER1	839 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	KAT5	Q92993	513 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	KREMEN1	Q96MU8	473 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	MSTO1	Q9BUK6	570 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	HTATIP2	Q9BUP3	242 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	IFIH1	Q9BYX4	1025 aa	Known RBP	10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	TSGA10	Q9BZW7	698 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	PRO3102	Q9H379	93 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	DEF6	Q9H4E7	631 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	RAB20	Q9NX57	234 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	SALL4	Q9UJQ4	1053 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	ZNF215	Q9UL58	517 aa	Predicted RBP	10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	GUCA1B	Q9UMX6	200 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	COL6A3	P12111	3177 aa		10.26	□□□□□ -0.77
HNRNPC-223	ENST00000556142	CEP290	O15078	2479 aa		10.25	□□□□□ -0.77
HNRNPC-223	ENST00000556142	ATP8B3	O60423	1300 aa		10.25	□□□□□ -0.77
HNRNPC-223	ENST00000556142	PTPRJ	Q12913	1337 aa		10.25	□□□□□ -0.77
HNRNPC-223	ENST00000556142	RANBP2	P49792	3224 aa	Known RBP	10.25	□□□□□ -0.77
HNRNPC-223	ENST00000556142	DDX3X	O00571	662 aa	Known RBP eCLIP	10.25	□□□□□ -0.77	1e-57	■■□□□ 12.4
HNRNPC-223	ENST00000556142	TNPO2	O14787	897 aa	Known RBP	10.25	□□□□□ -0.77
HNRNPC-223	ENST00000556142	KRT86	O43790	486 aa		10.25	□□□□□ -0.77
HNRNPC-223	ENST00000556142	F2	P00734	622 aa		10.25	□□□□□ -0.77
HNRNPC-223	ENST00000556142	ADAM17	P78536	824 aa		10.25	□□□□□ -0.77
HNRNPC-223	ENST00000556142	AMPD2	Q01433	879 aa		10.25	□□□□□ -0.77
HNRNPC-223	ENST00000556142	PRPF4B	Q13523	1007 aa	Known RBP	10.25	□□□□□ -0.77
HNRNPC-223	ENST00000556142	HIC1	Q14526	733 aa		10.25	□□□□□ -0.77
HNRNPC-223	ENST00000556142	GRIK4	Q16099	956 aa		10.25	□□□□□ -0.77

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