RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 MEI1Q5TIA1 1274 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 SYDE2Q5VT97 1194 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 ALG1LQ6GMV1 187 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 MFSD5Q6N075 450 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 CGB2Q6NT52 195 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 NEPROQ6NW34 567 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 CROCCP2Q86T23 111 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 TMEM110Q86TL2 294 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 NME9Q86XW9 330 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 GRAMD1CQ8IYS0 662 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 KIF2BQ8N4N8 673 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 KBTBD3Q8NAB2 608 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 USP38Q8NB14 1042 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 SUPT20HQ8NEM7 779 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 OR2W6PQ8NHA6 318 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 ACTRT1Q8TDG2 376 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 ZNF526Q8TF50 670 aaPredicted RBP5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 FBXO41Q8TF61 875 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 NOC3LQ8WTT2 800 aaKnown RBP5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 NAT14Q8WUY8 206 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 WDR60Q8WVS4 1066 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 NRG4Q8WWG1 115 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 FERMT2Q96AC1 680 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 HIC2Q96JB3 615 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 TUBGCP5Q96RT8 1024 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 NUP88Q99567 741 aaPredicted RBP5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 CGREF1Q99674 301 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 EDEM3Q9BZQ6 932 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 NSRP1Q9H0G5 558 aaKnown RBP5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 ASCC2Q9H1I8 757 aaPredicted RBP5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 DHX36Q9H2U1 1008 aaKnown RBP5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 BOLA2Q9H3K6 86 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 COPRSQ9NQ92 184 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 JADE2Q9NQC1 790 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 FAIMQ9NVQ4 179 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 ZNHIT6Q9NWK9 470 aaKnown RBP5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 ZDHHC7Q9NXF8 308 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 TUBA8Q9NY65 449 aaPredicted RBP5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 EHD2Q9NZN4 543 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 NDUFA13Q9P0J0 144 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 LARSQ9P2J5 1176 aaKnown RBP5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 SEC63Q9UGP8 760 aaKnown RBP5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 FBXL5Q9UKA1 691 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 PAIP2BQ9ULR5 123 aaKnown RBP5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 SOX13Q9UN79 622 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 PLAGL2Q9UPG8 496 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 TTLL3Q9Y4R7 772 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 PEAK1Q9H792 1746 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 MYO5AQ9Y4I1 1855 aaKnown RBP5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 ATP8B3O60423 1300 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 SLIT1O75093 1534 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 HEG1Q9ULI3 1381 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 PLEKHG1Q9ULL1 1385 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 A0A0G2JLW4 131 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 SSU72P8A0A1W2PR75 194 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 ESYT3A0FGR9 886 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 TM4SF5O14894 197 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 ATP9AO75110 1047 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 SERPINB7O75635 380 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 SUN1O94901 812 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 MOCS3O95396 460 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 RAPGEF3O95398 923 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 CHGBP05060 677 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 LYNP07948 512 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 TROVE2P10155 538 aaKnown RBP eCLIP5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 MYBL1P10243 752 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 VAV1P15498 845 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 ALOX15P16050 662 aaPredicted RBP5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 EPHA1P21709 976 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 POLD1P28340 1107 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 FLT3P36888 993 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 GRIA4P48058 902 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 DRG2P55039 364 aaKnown RBP5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 STX17P56962 302 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 RTP1P59025 263 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 TNNC1P63316 161 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 CREB5Q02930 508 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 AP1B1Q10567 949 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 WDR72Q3MJ13 1102 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 GDF6Q6KF10 455 aaPredicted RBP5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 KLC3Q6P597 504 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 USP49Q70CQ1 688 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 MAEAQ7L5Y9 396 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 PASD1Q8IV76 773 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 ADSSL1Q8N142 457 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 RASGEF1CQ8N431 466 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 BEND7Q8N7W2 519 aaPredicted RBP5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 TRPC4APQ8TEL6 797 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 CKAP2Q8WWK9 683 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 MTMR8Q96EF0 704 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 SCARF2Q96GP6 870 aaPredicted RBP5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 GBP5Q96PP8 586 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 HNRNPABQ99729 332 aaKnown RBP5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 ALG1Q9BT22 464 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 NACA2Q9H009 215 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 CCDC8Q9H0W5 538 aaPredicted RBP5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 VPS16Q9H269 839 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 FOXP1Q9H334 677 aaPredicted RBP5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 SLITRK6Q9H5Y7 841 aa5.69□□□□□ -1.5
LSM3P2-201ENST00000551246 DENND2DQ9H6A0 471 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms