RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 MRPL4Q9BYD3 311 aaKnown RBP8.83□□□□□ -1
DEPDC4-207ENST00000549249 INO80BQ9C086 356 aaPredicted RBP8.83□□□□□ -1
DEPDC4-207ENST00000549249 PRMT7Q9NVM4 692 aaPredicted RBP8.83□□□□□ -1
DEPDC4-207ENST00000549249 PHF24Q9UPV7 400 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 CNTNAP2Q9UHC6 1331 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 A0A0B4J269 797 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 MAPK13O15264 365 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 TSPAN1O60635 241 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 EXOC3O60645 756 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 CABYRO75952 493 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 TRIM49P0CI25 452 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 TRIM49CP0CI26 452 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 DARSP14868 501 aaKnown RBP8.82□□□□□ -1
DEPDC4-207ENST00000549249 KLK7P49862 253 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 WNT7BP56706 349 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 MCCD1P59942 119 aaPredicted RBP8.82□□□□□ -1
DEPDC4-207ENST00000549249 COPS2P61201 443 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 UBXN1Q04323 297 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 MCL1Q07820 350 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 MGAT3Q09327 533 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 KCNH2Q12809 1159 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 TBX2Q13207 712 aaPredicted RBP8.82□□□□□ -1
DEPDC4-207ENST00000549249 SNX17Q15036 470 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 TRIM71Q2Q1W2 868 aaKnown RBP8.82□□□□□ -1
DEPDC4-207ENST00000549249 FILIP1LQ4L180 1135 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 CRELD2Q6UXH1 353 aaPredicted RBP8.82□□□□□ -1
DEPDC4-207ENST00000549249 SRGAP1Q7Z6B7 1085 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 SERINC5Q86VE9 423 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 CDR2LQ86X02 465 aaPredicted RBP8.82□□□□□ -1
DEPDC4-207ENST00000549249 CCDC155Q8N6L0 562 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 RDH13Q8NBN7 331 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 SLC35C1Q96A29 364 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 CPB2Q96IY4 423 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 DEFB118Q96PH6 123 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 ERGIC2Q96RQ1 377 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 PRR14Q9BWN1 585 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 RNF208Q9H0X6 261 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 NDST4Q9H3R1 872 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 METTL14Q9HCE5 456 aaKnown RBP8.82□□□□□ -1
DEPDC4-207ENST00000549249 PTPRHQ9HD43 1115 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 ANKFY1Q9P2R3 1169 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 ARMCX3Q9UH62 379 aaPredicted RBP8.82□□□□□ -1
DEPDC4-207ENST00000549249 AGO2Q9UKV8 859 aaKnown RBP8.82□□□□□ -1
DEPDC4-207ENST00000549249 OGDHLQ9ULD0 1010 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 TNFSF13BQ9Y275 285 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 SIK3Q9Y2K2 1263 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 FRMD4BQ9Y2L6 1034 aa8.82□□□□□ -1
DEPDC4-207ENST00000549249 ITIH6Q6UXX5 1313 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 TANC1Q9C0D5 1861 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 A0A1W2PQC6 194 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 KBTBD13C9JR72 458 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 DNM1LO00429 736 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 PES1O00541 588 aaKnown RBP8.81□□□□□ -1
DEPDC4-207ENST00000549249 EXTL3O43909 919 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 TOM1L1O75674 476 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 TPM3P06753 285 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 HARSP12081 509 aaKnown RBP8.81□□□□□ -1
DEPDC4-207ENST00000549249 ARF4P18085 180 aaPredicted RBP8.81□□□□□ -1
DEPDC4-207ENST00000549249 TNFSF9P41273 254 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 VAMP7P51809 220 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 DLG4P78352 724 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 MRPS6P82932 125 aaKnown RBP8.81□□□□□ -1
DEPDC4-207ENST00000549249 PTPN11Q06124 597 aaPredicted RBP8.81□□□□□ -1
DEPDC4-207ENST00000549249 CYP24A1Q07973 514 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 GOLGA8FQ08AF8 430 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 GOLGA8DPQ0D2H9 430 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 KCNMA1Q12791 1236 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 BFSP1Q12934 665 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 PRPF4BQ13523 1007 aaKnown RBP8.81□□□□□ -1
DEPDC4-207ENST00000549249 ARID5BQ14865 1188 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 SYCP1Q15431 976 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 SNRNP35Q16560 246 aaKnown RBP8.81□□□□□ -1
DEPDC4-207ENST00000549249 PTGISQ16647 500 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 SEZ6Q53EL9 994 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 DCAF17Q5H9S7 520 aaPredicted RBP8.81□□□□□ -1
DEPDC4-207ENST00000549249 HABP4Q5JVS0 413 aaKnown RBP8.81□□□□□ -1
DEPDC4-207ENST00000549249 ATF7IP2Q5U623 682 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 SPECC1LQ69YQ0 1117 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 SLFN12LQ6IEE8 588 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 DPY19L2P1Q6NXN4 242 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 TAF2Q6P1X5 1199 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 MPZL3Q6UWV2 235 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 TSHZ1Q6ZSZ6 1077 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 RPAINQ86UA6 219 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 DRC7Q8IY82 874 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 GPD1LQ8N335 351 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 NME8Q8N427 588 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 ARRDC4Q8NCT1 418 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 PRIMPOLQ96LW4 560 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 MFSD14AQ96MC6 490 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 GLT1D1Q96MS3 346 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 SCLT1Q96NL6 688 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 FAM213AQ9BRX8 229 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 GCOM2Q9BZD3 368 aaPredicted RBP8.81□□□□□ -1
DEPDC4-207ENST00000549249 OSBPL7Q9BZF2 842 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 SENP6Q9GZR1 1112 aaPredicted RBP8.81□□□□□ -1
DEPDC4-207ENST00000549249 CDT1Q9H211 546 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 PDZD7Q9H5P4 517 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 STARD7Q9NQZ5 370 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 TRMT13Q9NUP7 481 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms