RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 TRIM67Q6ZTA4 783 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 KCNK18Q7Z418 384 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 ZBTB33Q86T24 672 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 PPFIBP1Q86W92 1011 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 HASPINQ8TF76 798 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 FBXL18Q96ME1 805 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 RIPOR3Q96MK2 946 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 MMTAG2Q9BU76 263 aaKnown RBP10.58□□□□□ -0.72
MSH5-218ENST00000494646 HERC2P3Q9BVR0 1158 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 CCDC113Q9H0I3 377 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 STK24Q9Y6E0 443 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 DMDP11532 3685 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 CITO14578 2027 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 VWA3AA6NCI4 1184 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 C2CD4DB7Z1M9 353 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 PTGESO14684 152 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 TEX28O15482 410 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 HIP1RO75146 1068 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 RECQL4O94761 1208 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 THP07101 528 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 RPL17P18621 184 aaKnown RBP10.57□□□□□ -0.72
MSH5-218ENST00000494646 GLUD2P49448 558 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 GRIK3Q13003 919 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 USP41Q3LFD5 358 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 ATF7IP2Q5U623 682 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 FUT10Q6P4F1 479 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 KIFAP3Q92845 792 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 PBXIP1Q96AQ6 731 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 TBC1D32Q96NH3 1257 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 NECTIN4Q96NY8 510 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 PNMA5Q96PV4 448 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 ADPGKQ9BRR6 497 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 RUSC1Q9BVN2 902 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 DZANK1Q9NVP4 752 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 STK39Q9UEW8 545 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 LIMD1Q9UGP4 676 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 ADAM28Q9UKQ2 775 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 SSX2IPQ9Y2D8 614 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 NR2E1Q9Y466 385 aa10.57□□□□□ -0.72
MSH5-218ENST00000494646 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.57□□□□□ -0.72
MSH5-218ENST00000494646 NPHP3-ACAD11A0A0J9YXS1 232 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 CCDC195A0A1B0GUA6 201 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 TMEM221A6NGB7 291 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 M0R296 226 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 EFEMP2O95967 443 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 IGFBP6P24592 240 aaPredicted RBP10.56□□□□□ -0.72
MSH5-218ENST00000494646 PLA2G5P39877 138 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 PRPHP41219 470 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 NPTX2P47972 431 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 MCM2P49736 904 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 EFNA5P52803 228 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 OSTNP61366 133 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 ATP2C1P98194 919 aaPredicted RBP10.56□□□□□ -0.72
MSH5-218ENST00000494646 DSG1Q02413 1049 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 HSP90AA2PQ14568 343 aaPredicted RBP10.56□□□□□ -0.72
MSH5-218ENST00000494646 GLRA4Q5JXX5 417 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 FAM171A1Q5VUB5 890 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 PRSS55Q6UWB4 352 aaPredicted RBP10.56□□□□□ -0.72
MSH5-218ENST00000494646 C1orf186Q6ZWK4 172 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 GPR149Q86SP6 731 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 CEP57Q86XR8 500 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 RNF168Q8IYW5 571 aaPredicted RBP10.56□□□□□ -0.72
MSH5-218ENST00000494646 DAW1Q8N136 415 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 CEP120Q8N960 986 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 RIN2Q8WYP3 895 aaPredicted RBP10.56□□□□□ -0.72
MSH5-218ENST00000494646 MFSD14AQ96MC6 490 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 ACO2Q99798 780 aaKnown RBP10.56□□□□□ -0.72
MSH5-218ENST00000494646 SMOC2Q9H3U7 446 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 KMT5AQ9NQR1 393 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 MAN1C1Q9NR34 630 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 CHST7Q9NS84 486 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 VWA8A3KMH1 1905 aa10.56□□□□□ -0.72
MSH5-218ENST00000494646 SLC16A4O15374 487 aa10.55□□□□□ -0.72
MSH5-218ENST00000494646 RFPL2O75678 378 aa10.55□□□□□ -0.72
MSH5-218ENST00000494646 ASGR2P07307 311 aa10.55□□□□□ -0.72
MSH5-218ENST00000494646 ADH1AP07327 375 aa10.55□□□□□ -0.72
MSH5-218ENST00000494646 PLA2G4BP0C869 781 aa10.55□□□□□ -0.72
MSH5-218ENST00000494646 CACNB1Q02641 598 aaPredicted RBP10.55□□□□□ -0.72
MSH5-218ENST00000494646 TUSC3Q13454 348 aa10.55□□□□□ -0.72
MSH5-218ENST00000494646 DHX8Q14562 1220 aaKnown RBP10.55□□□□□ -0.72
MSH5-218ENST00000494646 NAB2Q15742 525 aa10.55□□□□□ -0.72
MSH5-218ENST00000494646 PTPN21Q16825 1174 aa10.55□□□□□ -0.72
MSH5-218ENST00000494646 DCAF4L1Q3SXM0 396 aa10.55□□□□□ -0.72
MSH5-218ENST00000494646 TAS1R3Q7RTX0 852 aa10.55□□□□□ -0.72
MSH5-218ENST00000494646 KREMEN2Q8NCW0 462 aa10.55□□□□□ -0.72
MSH5-218ENST00000494646 CDK5RAP3Q96JB5 506 aa10.55□□□□□ -0.72
MSH5-218ENST00000494646 ZBTB45Q96K62 511 aaPredicted RBP10.55□□□□□ -0.72
MSH5-218ENST00000494646 TCHPQ9BT92 498 aa10.55□□□□□ -0.72
MSH5-218ENST00000494646 TARS2Q9BW92 718 aaKnown RBP10.55□□□□□ -0.72
MSH5-218ENST00000494646 TMEM134Q9H6X4 195 aa10.55□□□□□ -0.72
MSH5-218ENST00000494646 SFXN1Q9H9B4 322 aa10.55□□□□□ -0.72
MSH5-218ENST00000494646 RXFP1Q9HBX9 757 aa10.55□□□□□ -0.72
MSH5-218ENST00000494646 TNFSF13BQ9Y275 285 aa10.55□□□□□ -0.72
MSH5-218ENST00000494646 MUC6Q6W4X9 2439 aa10.55□□□□□ -0.72
MSH5-218ENST00000494646 TGM5O43548 720 aa10.54□□□□□ -0.72
MSH5-218ENST00000494646 KIF4AO95239 1232 aa10.54□□□□□ -0.72
MSH5-218ENST00000494646 GLUD1P00367 558 aa10.54□□□□□ -0.72
MSH5-218ENST00000494646 HARSP12081 509 aaKnown RBP10.54□□□□□ -0.72
MSH5-218ENST00000494646 GRIN1Q05586 938 aa10.54□□□□□ -0.72
MSH5-218ENST00000494646 SIGLEC14Q08ET2 396 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms