RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 ZNF568Q3ZCX4 644 aa14.71□□□□□ -0.06
NPHP4-207ENST00000470763 ZC3H18Q86VM9 953 aaKnown RBP14.71□□□□□ -0.06
NPHP4-207ENST00000470763 TXNRD3Q86VQ6 643 aa14.71□□□□□ -0.06
NPHP4-207ENST00000470763 NLGN2Q8NFZ4 835 aa14.71□□□□□ -0.06
NPHP4-207ENST00000470763 LRRC8CQ8TDW0 803 aa14.71□□□□□ -0.06
NPHP4-207ENST00000470763 FAM136AQ96C01 138 aa14.71□□□□□ -0.06
NPHP4-207ENST00000470763 FGD4Q96M96 766 aa14.71□□□□□ -0.06
NPHP4-207ENST00000470763 GPCPD1Q9NPB8 672 aa14.71□□□□□ -0.06
NPHP4-207ENST00000470763 NAALADL1Q9UQQ1 740 aa14.71□□□□□ -0.06
NPHP4-207ENST00000470763 CNTNAP4Q9C0A0 1308 aa14.7□□□□□ -0.06
NPHP4-207ENST00000470763 SFI1A8K8P3 1242 aa14.7□□□□□ -0.06
NPHP4-207ENST00000470763 TTC4O95801 387 aa14.7□□□□□ -0.06
NPHP4-207ENST00000470763 HSPA6P17066 643 aa14.7□□□□□ -0.06
NPHP4-207ENST00000470763 SLC12A3P55017 1021 aa14.7□□□□□ -0.06
NPHP4-207ENST00000470763 GIT2Q14161 759 aa14.7□□□□□ -0.06
NPHP4-207ENST00000470763 TMED2Q15363 201 aa14.7□□□□□ -0.06
NPHP4-207ENST00000470763 RC3H1Q5TC82 1133 aaKnown RBP14.7□□□□□ -0.06
NPHP4-207ENST00000470763 RNF207Q6ZRF8 634 aa14.7□□□□□ -0.06
NPHP4-207ENST00000470763 CYFIP1Q7L576 1253 aa14.7□□□□□ -0.06
NPHP4-207ENST00000470763 ZNF333Q96JL9 665 aa14.7□□□□□ -0.06
NPHP4-207ENST00000470763 GPR88Q9GZN0 384 aa14.7□□□□□ -0.06
NPHP4-207ENST00000470763 SCOCQ9UIL1 159 aa14.7□□□□□ -0.06
NPHP4-207ENST00000470763 FTLP02792 175 aaPredicted RBP14.7□□□□□ -0.06
NPHP4-207ENST00000470763 TRIM49P0CI25 452 aa14.7□□□□□ -0.06
NPHP4-207ENST00000470763 TRIM49CP0CI26 452 aa14.7□□□□□ -0.06
NPHP4-207ENST00000470763 EPM2AIP1Q7L775 607 aaPredicted RBP14.7□□□□□ -0.06
NPHP4-207ENST00000470763 SLC13A5Q86YT5 568 aaPredicted RBP14.7□□□□□ -0.06
NPHP4-207ENST00000470763 SYT11Q9BT88 431 aa14.7□□□□□ -0.06
NPHP4-207ENST00000470763 STK33Q9BYT3 514 aa14.7□□□□□ -0.06
NPHP4-207ENST00000470763 MTUS1Q9ULD2 1270 aa14.7□□□□□ -0.06
NPHP4-207ENST00000470763 G3BP2Q9UN86 482 aaKnown RBP14.7□□□□□ -0.06
NPHP4-207ENST00000470763 USH1CQ9Y6N9 552 aa14.7□□□□□ -0.06
NPHP4-207ENST00000470763 A0A1W2PRG0 241 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 RASA4BC9J798 803 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 PDXKO00764 312 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 MAPK13O15264 365 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 RASA4O43374 803 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 YARSP54577 528 aaKnown RBP14.69□□□□□ -0.06
NPHP4-207ENST00000470763 IL9RQ01113 521 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 ZC2HC1CQ53FD0 456 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-207ENST00000470763 CCNJLQ8IV13 435 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 ZFAND2BQ8WV99 257 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 ATG4AQ8WYN0 398 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 ITFG2Q969R8 447 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 ADAM33Q9BZ11 813 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 METTL14Q9HCE5 456 aaKnown RBP14.69□□□□□ -0.06
NPHP4-207ENST00000470763 BSDC1Q9NW68 430 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-207ENST00000470763 MIF4GDA9UHW6 222 aaKnown RBP14.69□□□□□ -0.06
NPHP4-207ENST00000470763 ATP9AO75110 1047 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 ATP5HO75947 161 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 KCNA3P22001 575 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 CUL3Q13618 768 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 CLUL1Q15846 466 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 ERFEQ4G0M1 354 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 CBWD6Q4V339 395 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 TAF1BQ53T94 588 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-207ENST00000470763 CBWD3Q5JTY5 395 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 CBWD5Q5RIA9 395 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 TMEM63BQ5T3F8 832 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 CLEC10AQ8IUN9 316 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 RPUSD2Q8IZ73 545 aaKnown RBP14.69□□□□□ -0.06
NPHP4-207ENST00000470763 LRRC47Q8N1G4 583 aaKnown RBP14.69□□□□□ -0.06
NPHP4-207ENST00000470763 INPP5DQ92835 1189 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 GRAMD1AQ96CP6 724 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 C9orf72Q96LT7 481 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 DNAJC18Q9H819 358 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 FAM196BA6NMK8 535 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 TULP1O00294 542 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-207ENST00000470763 CLDN3O15551 220 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 SPOPO43791 374 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 CDK8P49336 464 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 ITGA8P53708 1063 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 RCN1Q15293 331 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 SIX1Q15475 284 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-207ENST00000470763 HYIQ5T013 277 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 SNX30Q5VWJ9 437 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 IRGCQ6NXR0 463 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 DSTYKQ6XUX3 929 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 ARHGAP22Q7Z5H3 698 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 KIAA0825Q8IV33 1275 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 DTX3LQ8TDB6 740 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 NRG4Q8WWG1 115 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 SPIRE2Q8WWL2 714 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 RUSC1Q9BVN2 902 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 TYW1Q9NV66 732 aaKnown RBP14.69□□□□□ -0.06
NPHP4-207ENST00000470763 NINJ2Q9NZG7 142 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 USP20Q9Y2K6 914 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 SH3BP1Q9Y3L3 701 aa14.69□□□□□ -0.06
NPHP4-207ENST00000470763 CRKLP46109 303 aaKnown RBP14.68□□□□□ -0.06
NPHP4-207ENST00000470763 GRIK5Q16478 980 aa14.68□□□□□ -0.06
NPHP4-207ENST00000470763 PARP10Q53GL7 1025 aa14.68□□□□□ -0.06
NPHP4-207ENST00000470763 WASHC2DQ5SRD0 308 aa14.68□□□□□ -0.06
NPHP4-207ENST00000470763 RHOT2Q8IXI1 618 aa14.68□□□□□ -0.06
NPHP4-207ENST00000470763 FAM186BQ8IYM0 893 aa14.68□□□□□ -0.06
NPHP4-207ENST00000470763 SCG3Q8WXD2 468 aaKnown RBP14.68□□□□□ -0.06
NPHP4-207ENST00000470763 ARHGEF1Q92888 912 aaKnown RBP14.68□□□□□ -0.06
NPHP4-207ENST00000470763 DCLRE1BQ9H816 532 aa14.68□□□□□ -0.06
NPHP4-207ENST00000470763 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.68□□□□□ -0.06
NPHP4-207ENST00000470763 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.68□□□□□ -0.06
NPHP4-207ENST00000470763 FOXN3O00409 490 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms