RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 COL19A1Q14993 1142 aa11.41□□□□□ -0.58
LINC00342-202ENST00000448494 PDK3Q15120 406 aa11.41□□□□□ -0.58
LINC00342-202ENST00000448494 RPS6KA1Q15418 735 aa11.41□□□□□ -0.58
LINC00342-202ENST00000448494 ITIH5Q86UX2 942 aa11.41□□□□□ -0.58
LINC00342-202ENST00000448494 C2CD5Q86YS7 1000 aa11.41□□□□□ -0.58
LINC00342-202ENST00000448494 ANKMY2Q8IV38 441 aa11.41□□□□□ -0.58
LINC00342-202ENST00000448494 NOSTRINQ8IVI9 506 aa11.41□□□□□ -0.58
LINC00342-202ENST00000448494 SUN5Q8TC36 379 aa11.41□□□□□ -0.58
LINC00342-202ENST00000448494 EGLN2Q96KS0 407 aa11.41□□□□□ -0.58
LINC00342-202ENST00000448494 NEUROD6Q96NK8 337 aa11.41□□□□□ -0.58
LINC00342-202ENST00000448494 ZDHHC18Q9NUE0 388 aa11.41□□□□□ -0.58
LINC00342-202ENST00000448494 ANGEL1Q9UNK9 670 aaKnown RBP11.41□□□□□ -0.58
LINC00342-202ENST00000448494 TAC1P20366 129 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 UBA7P41226 1012 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 RAP1GDS1P52306 607 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 NUP107P57740 925 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 EHHADHQ08426 723 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 TEFQ10587 303 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 TUBA3CQ13748 450 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 C16orf72Q14CZ0 275 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 ASTE1Q2TB18 679 aaPredicted RBP11.4□□□□□ -0.58
LINC00342-202ENST00000448494 ANKRD20A4Q4UJ75 823 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 RWDD4Q6NW29 188 aaKnown RBP11.4□□□□□ -0.58
LINC00342-202ENST00000448494 RASSF3Q86WH2 238 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 TTLL11Q8NHH1 800 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 MCUR1Q96AQ8 359 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 SENP6Q9GZR1 1112 aaPredicted RBP11.4□□□□□ -0.58
LINC00342-202ENST00000448494 CSRNP2Q9H175 543 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 EHD1Q9H4M9 534 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 GPAMQ9HCL2 828 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 CNGB3Q9NQW8 809 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 TRNAU1APQ9NX07 287 aaKnown RBP11.4□□□□□ -0.58
LINC00342-202ENST00000448494 ZFP69BQ9UJL9 534 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 ERVK-11Q9UQG0 969 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 TLL2Q9Y6L7 1015 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 PPLO60437 1756 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 KCNK3O14649 394 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 IDH3BO43837 385 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 COBLO75128 1261 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 FUCA1P04066 466 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 ESRRAP11474 423 aaPredicted RBP11.4□□□□□ -0.58
LINC00342-202ENST00000448494 RARGP13631 454 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 VCLP18206 1134 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 TOB1P50616 345 aaPredicted RBP11.4□□□□□ -0.58
LINC00342-202ENST00000448494 THOC5Q13769 683 aaKnown RBP11.4□□□□□ -0.58
LINC00342-202ENST00000448494 CRY1Q16526 586 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 PPP2R5EQ16537 467 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 TMEM63BQ5T3F8 832 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 WAPLQ7Z5K2 1190 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 ZNF410Q86VK4 478 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 ANKRD13CQ8N6S4 541 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 EPS8L3Q8TE67 593 aaKnown RBP11.4□□□□□ -0.58
LINC00342-202ENST00000448494 BORCS5Q969J3 196 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 ERP44Q9BS26 406 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 ZNF304Q9HCX3 659 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 RRN3Q9NYV6 651 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 STK17AQ9UEE5 414 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 AMACRQ9UHK6 382 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 ZBTB1Q9Y2K1 713 aa11.4□□□□□ -0.58
LINC00342-202ENST00000448494 KRIT1O00522 736 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 GYG2O15488 501 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 BUD23O43709 281 aaKnown RBP11.39□□□□□ -0.59
LINC00342-202ENST00000448494 TSPAN1O60635 241 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 ESRRBO95718 433 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 ITGA6P23229 1130 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 AP3M2P53677 418 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 DRG2P55039 364 aaKnown RBP11.39□□□□□ -0.59
LINC00342-202ENST00000448494 VCPP55072 806 aaKnown RBP11.39□□□□□ -0.59
LINC00342-202ENST00000448494 KLRC3Q07444 240 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 TAF1BQ53T94 588 aaPredicted RBP11.39□□□□□ -0.59
LINC00342-202ENST00000448494 HERC4Q5GLZ8 1057 aaPredicted RBP11.39□□□□□ -0.59
LINC00342-202ENST00000448494 TMEM132EQ6IEE7 984 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 POTEHQ6S545 545 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 CCDC81Q6ZN84 652 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 CYP2U1Q7Z449 544 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 THEMISQ8N1K5 641 aaPredicted RBP11.39□□□□□ -0.59
LINC00342-202ENST00000448494 METTL25Q8N6Q8 603 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 CALML6Q8TD86 181 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 CHPT1Q8WUD6 406 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 SCFD1Q8WVM8 642 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 PCMTD1Q96MG8 357 aaPredicted RBP11.39□□□□□ -0.59
LINC00342-202ENST00000448494 SERPINB12Q96P63 405 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 BTBD9Q96Q07 612 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 TRIM55Q9BYV6 548 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 CCDC8Q9H0W5 538 aaPredicted RBP11.39□□□□□ -0.59
LINC00342-202ENST00000448494 ARIH1Q9Y4X5 557 aaPredicted RBP11.39□□□□□ -0.59
LINC00342-202ENST00000448494 WDR19Q8NEZ3 1342 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 CFAP69A5D8W1 941 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 MCF2LO15068 1137 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 XPOTO43592 962 aaKnown RBP11.39□□□□□ -0.59
LINC00342-202ENST00000448494 IL4RP24394 825 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 SLC1A4P43007 532 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 ENTPD1P49961 510 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 DNA2P51530 1060 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 HSPA14Q0VDF9 509 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 AIMP1Q12904 312 aaKnown RBP11.39□□□□□ -0.59
LINC00342-202ENST00000448494 C15orf59Q2T9L4 293 aaPredicted RBP11.39□□□□□ -0.59
LINC00342-202ENST00000448494 RGS9BPQ6ZS82 235 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 CHST3Q7LGC8 479 aa11.39□□□□□ -0.59
LINC00342-202ENST00000448494 PROSER2Q86WR7 435 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms