RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 TAX1BP1Q86VP1 789 aa12.62□□□□□ -0.39
ITSN1-211ENST00000399355 CCT8L2Q96SF2 557 aa12.62□□□□□ -0.39
ITSN1-211ENST00000399355 LUC7LQ9NQ29 371 aaKnown RBP12.62□□□□□ -0.39
ITSN1-211ENST00000399355 PXMP2Q9NR77 195 aa12.62□□□□□ -0.39
ITSN1-211ENST00000399355 TBX20Q9UMR3 447 aa12.62□□□□□ -0.39
ITSN1-211ENST00000399355 GOLGA8SH3BPF8 625 aa12.62□□□□□ -0.39
ITSN1-211ENST00000399355 GOLGA8MH3BSY2 632 aa12.62□□□□□ -0.39
ITSN1-211ENST00000399355 NR3C2P08235 984 aa12.62□□□□□ -0.39
ITSN1-211ENST00000399355 PLS3P13797 630 aa12.62□□□□□ -0.39
ITSN1-211ENST00000399355 RPL7AP62424 266 aaKnown RBP12.62□□□□□ -0.39
ITSN1-211ENST00000399355 POU5F1Q01860 360 aaKnown RBP12.62□□□□□ -0.39
ITSN1-211ENST00000399355 MKRN3Q13064 507 aaKnown RBP12.62□□□□□ -0.39
ITSN1-211ENST00000399355 ZKSCAN8Q15776 578 aaPredicted RBP12.62□□□□□ -0.39
ITSN1-211ENST00000399355 RAB6CQ53S08 254 aa12.62□□□□□ -0.39
ITSN1-211ENST00000399355 CCDC137Q6PK04 289 aaKnown RBP12.62□□□□□ -0.39
ITSN1-211ENST00000399355 NETO2Q8NC67 525 aa12.62□□□□□ -0.39
ITSN1-211ENST00000399355 FMO2Q99518 471 aa12.62□□□□□ -0.39
ITSN1-211ENST00000399355 RAB6CQ9H0N0 254 aa12.62□□□□□ -0.39
ITSN1-211ENST00000399355 RNF14Q9UBS8 474 aa12.62□□□□□ -0.39
ITSN1-211ENST00000399355 NOCTQ9UK39 431 aaKnown RBP12.62□□□□□ -0.39
ITSN1-211ENST00000399355 ZNRF3Q9ULT6 936 aa12.62□□□□□ -0.39
ITSN1-211ENST00000399355 SLFN11Q7Z7L1 901 aa12.61□□□□□ -0.39
ITSN1-211ENST00000399355 ZNF564Q8TBZ8 553 aaPredicted RBP12.61□□□□□ -0.39
ITSN1-211ENST00000399355 PARD3BQ8TEW8 1205 aa12.61□□□□□ -0.39
ITSN1-211ENST00000399355 PAGR1Q9BTK6 254 aa12.61□□□□□ -0.39
ITSN1-211ENST00000399355 EDEM3Q9BZQ6 932 aa12.61□□□□□ -0.39
ITSN1-211ENST00000399355 SLC38A10Q9HBR0 1119 aa12.61□□□□□ -0.39
ITSN1-211ENST00000399355 CAPN7Q9Y6W3 813 aa12.61□□□□□ -0.39
ITSN1-211ENST00000399355 VWA5AO00534 786 aa12.61□□□□□ -0.39
ITSN1-211ENST00000399355 ATP4AP20648 1035 aa12.61□□□□□ -0.39
ITSN1-211ENST00000399355 HSD17B4P51659 736 aa12.61□□□□□ -0.39
ITSN1-211ENST00000399355 FER1L6Q2WGJ9 1857 aa12.61□□□□□ -0.39
ITSN1-211ENST00000399355 MYZAPP0CAP1 466 aa12.61□□□□□ -0.39
ITSN1-211ENST00000399355 DSG3P32926 999 aa12.61□□□□□ -0.39
ITSN1-211ENST00000399355 SMTNL2Q2TAL5 461 aa12.61□□□□□ -0.39
ITSN1-211ENST00000399355 HELQQ8TDG4 1101 aa12.61□□□□□ -0.39
ITSN1-211ENST00000399355 ZNF473Q8WTR7 871 aaKnown RBP12.61□□□□□ -0.39
ITSN1-211ENST00000399355 C9orf72Q96LT7 481 aa12.61□□□□□ -0.39
ITSN1-211ENST00000399355 NUCKS1Q9H1E3 243 aaKnown RBP12.61□□□□□ -0.39
ITSN1-211ENST00000399355 MCM3APO60318 1980 aa12.61□□□□□ -0.39
ITSN1-211ENST00000399355 EBAG9O00559 213 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 CST3P01034 146 aaPredicted RBP12.6□□□□□ -0.39
ITSN1-211ENST00000399355 SRGAP2CP0DJJ0 459 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 GAP43P17677 238 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 DYNLT1P63172 113 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 PRKCEQ02156 737 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 TREML2Q5T2D2 321 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 CYP4A22Q5TCH4 519 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 GDAP1Q8TB36 358 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 MYCBPAPQ8TBZ2 947 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 ACTRT1Q8TDG2 376 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 STRA6Q9BX79 667 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 STK32BQ9NY57 414 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 CNOT7Q9UIV1 285 aaKnown RBP12.6□□□□□ -0.39
ITSN1-211ENST00000399355 ZNF646O15015 1829 aaPredicted RBP12.6□□□□□ -0.39
ITSN1-211ENST00000399355 SHOX2O60902 331 aaPredicted RBP12.6□□□□□ -0.39
ITSN1-211ENST00000399355 MCM3P25205 808 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 TAS2R40P59535 323 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 TMEM270Q6UE05 265 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 TMEM192Q8IY95 271 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 RPTORQ8N122 1335 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 ANKRD42Q8N9B4 389 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 COPS5Q92905 334 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 CCDC114Q96M63 670 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 APOBEC3GQ9HC16 384 aaKnown RBP12.6□□□□□ -0.39
ITSN1-211ENST00000399355 A1CFQ9NQ94 594 aaKnown RBP12.6□□□□□ -0.39
ITSN1-211ENST00000399355 FBXO40Q9UH90 709 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 DAAM1Q9Y4D1 1078 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 SLC16A3O15427 465 aaKnown RBP12.6□□□□□ -0.39
ITSN1-211ENST00000399355 WEE2P0C1S8 567 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 KCNT1Q5JUK3 1230 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 NLGN2Q8NFZ4 835 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 JPH2Q9BR39 696 aaPredicted RBP12.6□□□□□ -0.39
ITSN1-211ENST00000399355 TSPYL1Q9H0U9 437 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 KIF9Q9HAQ2 790 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 GRHL1Q9NZI5 618 aa12.6□□□□□ -0.39
ITSN1-211ENST00000399355 UTP11Q9Y3A2 253 aaKnown RBP12.6□□□□□ -0.39
ITSN1-211ENST00000399355 TP73O15350 636 aa12.59□□□□□ -0.39
ITSN1-211ENST00000399355 RAP1GAPP47736 663 aa12.59□□□□□ -0.39
ITSN1-211ENST00000399355 PTGISQ16647 500 aa12.59□□□□□ -0.39
ITSN1-211ENST00000399355 ASAP3Q8TDY4 903 aa12.59□□□□□ -0.39
ITSN1-211ENST00000399355 RAPGEF5Q92565 580 aa12.59□□□□□ -0.39
ITSN1-211ENST00000399355 CAMKK2Q96RR4 588 aa12.59□□□□□ -0.39
ITSN1-211ENST00000399355 GLT8D2Q9H1C3 349 aa12.59□□□□□ -0.39
ITSN1-211ENST00000399355 TMBIM4Q9HC24 238 aa12.59□□□□□ -0.39
ITSN1-211ENST00000399355 SUCLA2Q9P2R7 463 aaPredicted RBP12.59□□□□□ -0.39
ITSN1-211ENST00000399355 FEM1BQ9UK73 627 aa12.59□□□□□ -0.39
ITSN1-211ENST00000399355 KIAA0391O15091 583 aaKnown RBP12.59□□□□□ -0.39
ITSN1-211ENST00000399355 EIF3DO15371 548 aaKnown RBP eCLIP12.59□□□□□ -0.39
ITSN1-211ENST00000399355 OPA1O60313 960 aa12.59□□□□□ -0.39
ITSN1-211ENST00000399355 TMEM253P0C7T8 217 aa12.59□□□□□ -0.39
ITSN1-211ENST00000399355 MDH1P40925 334 aaKnown RBP12.59□□□□□ -0.39
ITSN1-211ENST00000399355 LY6KQ17RY6 165 aa12.59□□□□□ -0.39
ITSN1-211ENST00000399355 CYP4F22Q6NT55 531 aa12.59□□□□□ -0.39
ITSN1-211ENST00000399355 POLR3FQ9H1D9 316 aaPredicted RBP12.59□□□□□ -0.39
ITSN1-211ENST00000399355 UBIAD1Q9Y5Z9 338 aa12.59□□□□□ -0.39
ITSN1-211ENST00000399355 COL11A1P12107 1806 aaPredicted RBP12.59□□□□□ -0.39
ITSN1-211ENST00000399355 ANKRD62A6NC57 917 aa12.59□□□□□ -0.39
ITSN1-211ENST00000399355 EIF4E1BA6NMX2 242 aaKnown RBP12.59□□□□□ -0.39
ITSN1-211ENST00000399355 CETPP11597 493 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms