RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 HGSO14964 777 aaPredicted RBP7.01□□□□□ -1.29
BDNF-203ENST00000395978 ZNF263O14978 683 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 TLR3O15455 904 aaKnown RBP7.01□□□□□ -1.29
BDNF-203ENST00000395978 PPP1R37O75864 691 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 CALB1P05937 261 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 SLC1A1P43005 524 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 AP3M2P53677 418 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 ACTR2P61160 394 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 EMC2Q15006 297 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 DUOXA2Q1HG44 320 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 BMT2Q1RMZ1 405 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 EAPPQ56P03 285 aaPredicted RBP7.01□□□□□ -1.29
BDNF-203ENST00000395978 LGSNQ5TDP6 509 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 SCARA5Q6ZMJ2 495 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 PNMA8AQ86V59 439 aaPredicted RBP7.01□□□□□ -1.29
BDNF-203ENST00000395978 VSIG1Q86XK7 387 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 RBM41Q96IZ5 413 aaKnown RBP7.01□□□□□ -1.29
BDNF-203ENST00000395978 CELF4Q9BZC1 486 aaKnown RBP7.01□□□□□ -1.29
BDNF-203ENST00000395978 VPS33BQ9H267 617 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 OSGEPQ9NPF4 335 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 TXNDC16Q9P2K2 825 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 ASTN1O14525 1302 aa7□□□□□ -1.29
BDNF-203ENST00000395978 GLI3P10071 1580 aa7□□□□□ -1.29
BDNF-203ENST00000395978 GMNCA6NCL1 334 aa7□□□□□ -1.29
BDNF-203ENST00000395978 POC1B-GALNT4F8VUJ3 575 aa7□□□□□ -1.29
BDNF-203ENST00000395978 PHF2O75151 1096 aa7□□□□□ -1.29
BDNF-203ENST00000395978 TJP3O95049 919 aa7□□□□□ -1.29
BDNF-203ENST00000395978 GUCY1A3Q02108 690 aa7□□□□□ -1.29
BDNF-203ENST00000395978 CAV1Q03135 178 aa7□□□□□ -1.29
BDNF-203ENST00000395978 KRT81Q14533 505 aa7□□□□□ -1.29
BDNF-203ENST00000395978 MUM1L1Q5H9M0 696 aa7□□□□□ -1.29
BDNF-203ENST00000395978 JAMLQ86YT9 394 aa7□□□□□ -1.29
BDNF-203ENST00000395978 MSL3Q8N5Y2 521 aaKnown RBP7□□□□□ -1.29
BDNF-203ENST00000395978 C1orf54Q8WWF1 131 aa7□□□□□ -1.29
BDNF-203ENST00000395978 SEPT1Q8WYJ6 367 aa7□□□□□ -1.29
BDNF-203ENST00000395978 CAVIN3Q969G5 261 aa7□□□□□ -1.29
BDNF-203ENST00000395978 ZKSCAN4Q969J2 545 aaPredicted RBP7□□□□□ -1.29
BDNF-203ENST00000395978 C2orf40Q9H1Z8 148 aa7□□□□□ -1.29
BDNF-203ENST00000395978 DNAJC17Q9NVM6 304 aaKnown RBP7□□□□□ -1.29
BDNF-203ENST00000395978 KLHL14Q9P2G3 628 aa7□□□□□ -1.29
BDNF-203ENST00000395978 VAV3Q9UKW4 847 aa7□□□□□ -1.29
BDNF-203ENST00000395978 SIPA1L3O60292 1781 aaPredicted RBP7□□□□□ -1.29
BDNF-203ENST00000395978 EIF3HO15372 352 aaKnown RBP eCLIP7□□□□□ -1.29
BDNF-203ENST00000395978 TBC1D12O60347 775 aa7□□□□□ -1.29
BDNF-203ENST00000395978 HLA-DRAP01903 254 aa7□□□□□ -1.29
BDNF-203ENST00000395978 MAGEA9P43362 315 aa7□□□□□ -1.29
BDNF-203ENST00000395978 ZNF699Q32M78 642 aa7□□□□□ -1.29
BDNF-203ENST00000395978 FYB2Q5VWT5 728 aa7□□□□□ -1.29
BDNF-203ENST00000395978 PAF1Q8N7H5 531 aa7□□□□□ -1.29
BDNF-203ENST00000395978 CCDC63Q8NA47 563 aa7□□□□□ -1.29
BDNF-203ENST00000395978 TMC2Q8TDI7 906 aa7□□□□□ -1.29
BDNF-203ENST00000395978 RNF25Q96BH1 459 aaPredicted RBP7□□□□□ -1.29
BDNF-203ENST00000395978 CFAP57Q96MR6 1250 aa7□□□□□ -1.29
BDNF-203ENST00000395978 RPS6KC1Q96S38 1066 aa7□□□□□ -1.29
BDNF-203ENST00000395978 PXMP2Q9NR77 195 aa7□□□□□ -1.29
BDNF-203ENST00000395978 CHORDC1Q9UHD1 332 aaPredicted RBP7□□□□□ -1.29
BDNF-203ENST00000395978 TNKS1BP1Q9C0C2 1729 aaKnown RBP7□□□□□ -1.29
BDNF-203ENST00000395978 NUP98P52948 1817 aa7□□□□□ -1.29
BDNF-203ENST00000395978 CES2O00748 559 aa7□□□□□ -1.29
BDNF-203ENST00000395978 TGFB1I1O43294 461 aa7□□□□□ -1.29
BDNF-203ENST00000395978 EXTL3O43909 919 aa7□□□□□ -1.29
BDNF-203ENST00000395978 SUN1O94901 812 aa7□□□□□ -1.29
BDNF-203ENST00000395978 SGPL1O95470 568 aa7□□□□□ -1.29
BDNF-203ENST00000395978 MDH1P40925 334 aaKnown RBP7□□□□□ -1.29
BDNF-203ENST00000395978 BYSLQ13895 437 aaKnown RBP7□□□□□ -1.29
BDNF-203ENST00000395978 ZNF568Q3ZCX4 644 aa7□□□□□ -1.29
BDNF-203ENST00000395978 NBPF12Q5TAG4 269 aaPredicted RBP7□□□□□ -1.29
BDNF-203ENST00000395978 IRF2BP2Q7Z5L9 587 aa7□□□□□ -1.29
BDNF-203ENST00000395978 DPP9Q86TI2 863 aa7□□□□□ -1.29
BDNF-203ENST00000395978 CTAGE3PQ8IX95 158 aa7□□□□□ -1.29
BDNF-203ENST00000395978 TAB3Q8N5C8 712 aaPredicted RBP7□□□□□ -1.29
BDNF-203ENST00000395978 FBF1Q8TES7 1133 aa7□□□□□ -1.29
BDNF-203ENST00000395978 AENQ8WTP8 325 aaKnown RBP7□□□□□ -1.29
BDNF-203ENST00000395978 CPA5Q8WXQ8 436 aa7□□□□□ -1.29
BDNF-203ENST00000395978 PI4K2AQ9BTU6 479 aa7□□□□□ -1.29
BDNF-203ENST00000395978 TARS2Q9BW92 718 aaKnown RBP7□□□□□ -1.29
BDNF-203ENST00000395978 CYP26B1Q9NR63 512 aa7□□□□□ -1.29
BDNF-203ENST00000395978 FRMD4AQ9P2Q2 1039 aaPredicted RBP7□□□□□ -1.29
BDNF-203ENST00000395978 ATMINO43313 823 aaPredicted RBP6.99□□□□□ -1.29
BDNF-203ENST00000395978 TLR2O60603 784 aa6.99□□□□□ -1.29
BDNF-203ENST00000395978 GARTP22102 1010 aa6.99□□□□□ -1.29
BDNF-203ENST00000395978 AARSP49588 968 aaKnown RBP eCLIP6.99□□□□□ -1.29
BDNF-203ENST00000395978 DYNLT1P63172 113 aa6.99□□□□□ -1.29
BDNF-203ENST00000395978 IL9RQ01113 521 aa6.99□□□□□ -1.29
BDNF-203ENST00000395978 CDR2Q01850 454 aa6.99□□□□□ -1.29
BDNF-203ENST00000395978 PGM5Q15124 567 aa6.99□□□□□ -1.29
BDNF-203ENST00000395978 CBWD6Q4V339 395 aa6.99□□□□□ -1.29
BDNF-203ENST00000395978 EPC2Q52LR7 807 aa6.99□□□□□ -1.29
BDNF-203ENST00000395978 CBWD3Q5JTY5 395 aa6.99□□□□□ -1.29
BDNF-203ENST00000395978 CBWD5Q5RIA9 395 aa6.99□□□□□ -1.29
BDNF-203ENST00000395978 HGSNATQ68CP4 663 aa6.99□□□□□ -1.29
BDNF-203ENST00000395978 DEFB132Q7Z7B7 95 aa6.99□□□□□ -1.29
BDNF-203ENST00000395978 CCDC125Q86Z20 511 aa6.99□□□□□ -1.29
BDNF-203ENST00000395978 RFX6Q8HWS3 928 aa6.99□□□□□ -1.29
BDNF-203ENST00000395978 RNF149Q8NC42 400 aa6.99□□□□□ -1.29
BDNF-203ENST00000395978 CHST13Q8NET6 341 aa6.99□□□□□ -1.29
BDNF-203ENST00000395978 OR2W6PQ8NHA6 318 aa6.99□□□□□ -1.29
BDNF-203ENST00000395978 ARL8AQ96BM9 186 aa6.99□□□□□ -1.29
BDNF-203ENST00000395978 MBOAT7Q96N66 472 aa6.99□□□□□ -1.29
BDNF-203ENST00000395978 CALN1Q9BXU9 219 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms