RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 PPP2R3AQ06190 1150 aa15.96■□□□□ 0.15
CXCL12-201ENST00000343575 CYP24A1Q07973 514 aa15.96■□□□□ 0.15
CXCL12-201ENST00000343575 PTGISQ16647 500 aa15.96■□□□□ 0.15
CXCL12-201ENST00000343575 CBWD6Q4V339 395 aa15.96■□□□□ 0.15
CXCL12-201ENST00000343575 CBWD3Q5JTY5 395 aa15.96■□□□□ 0.15
CXCL12-201ENST00000343575 CBWD5Q5RIA9 395 aa15.96■□□□□ 0.15
CXCL12-201ENST00000343575 TCERG1LQ5VWI1 586 aa15.96■□□□□ 0.15
CXCL12-201ENST00000343575 ZBTB33Q86T24 672 aa15.96■□□□□ 0.15
CXCL12-201ENST00000343575 RPAINQ86UA6 219 aa15.96■□□□□ 0.15
CXCL12-201ENST00000343575 TC2NQ8N9U0 490 aa15.96■□□□□ 0.15
CXCL12-201ENST00000343575 DHX38Q92620 1227 aaKnown RBP15.96■□□□□ 0.15
CXCL12-201ENST00000343575 GLT1D1Q96MS3 346 aa15.96■□□□□ 0.15
CXCL12-201ENST00000343575 SCLT1Q96NL6 688 aa15.96■□□□□ 0.15
CXCL12-201ENST00000343575 POP1Q99575 1024 aaKnown RBP15.96■□□□□ 0.15
CXCL12-201ENST00000343575 MSTO1Q9BUK6 570 aa15.96■□□□□ 0.15
CXCL12-201ENST00000343575 OSBPL7Q9BZF2 842 aa15.96■□□□□ 0.15
CXCL12-201ENST00000343575 PDZD7Q9H5P4 517 aa15.96■□□□□ 0.15
CXCL12-201ENST00000343575 OGDHLQ9ULD0 1010 aa15.96■□□□□ 0.15
CXCL12-201ENST00000343575 A0A1B0GUA9 196 aa15.95■□□□□ 0.14
CXCL12-201ENST00000343575 SFPQP23246 707 aaKnown RBP eCLIP15.95■□□□□ 0.14
CXCL12-201ENST00000343575 TNFSF9P41273 254 aa15.95■□□□□ 0.14
CXCL12-201ENST00000343575 MNX1P50219 401 aaPredicted RBP15.95■□□□□ 0.14
CXCL12-201ENST00000343575 FKBP15Q5T1M5 1219 aa15.95■□□□□ 0.14
CXCL12-201ENST00000343575 MPZL3Q6UWV2 235 aa15.95■□□□□ 0.14
CXCL12-201ENST00000343575 CEP120Q8N960 986 aa15.95■□□□□ 0.14
CXCL12-201ENST00000343575 VTI1AQ96AJ9 217 aa15.95■□□□□ 0.14
CXCL12-201ENST00000343575 FAM84AQ96KN4 292 aa15.95■□□□□ 0.14
CXCL12-201ENST00000343575 CRACR2AQ9BSW2 395 aa15.95■□□□□ 0.14
CXCL12-201ENST00000343575 GCOM2Q9BZD3 368 aaPredicted RBP15.95■□□□□ 0.14
CXCL12-201ENST00000343575 CDT1Q9H211 546 aa15.95■□□□□ 0.14
CXCL12-201ENST00000343575 LRRIQ3A6PVS8 624 aaPredicted RBP15.95■□□□□ 0.14
CXCL12-201ENST00000343575 KIAA0391O15091 583 aaKnown RBP15.95■□□□□ 0.14
CXCL12-201ENST00000343575 MEFVO15553 781 aaPredicted RBP15.95■□□□□ 0.14
CXCL12-201ENST00000343575 NOL4O94818 638 aa15.95■□□□□ 0.14
CXCL12-201ENST00000343575 CHRNA1P02708 482 aa15.95■□□□□ 0.14
CXCL12-201ENST00000343575 CASP14P31944 242 aa15.95■□□□□ 0.14
CXCL12-201ENST00000343575 FMO5P49326 533 aa15.95■□□□□ 0.14
CXCL12-201ENST00000343575 CRYBB1P53674 252 aaPredicted RBP15.95■□□□□ 0.14
CXCL12-201ENST00000343575 ADKP55263 362 aaKnown RBP15.95■□□□□ 0.14
CXCL12-201ENST00000343575 TRIM71Q2Q1W2 868 aaKnown RBP15.95■□□□□ 0.14
CXCL12-201ENST00000343575 ZNF333Q96JL9 665 aa15.95■□□□□ 0.14
CXCL12-201ENST00000343575 CELF4Q9BZC1 486 aaKnown RBP15.95■□□□□ 0.14
CXCL12-201ENST00000343575 TTC26A0AVF1 554 aa15.94■□□□□ 0.14
CXCL12-201ENST00000343575 ZNF233A6NK53 670 aa15.94■□□□□ 0.14
CXCL12-201ENST00000343575 DNM1LO00429 736 aa15.94■□□□□ 0.14
CXCL12-201ENST00000343575 HSPA1AP0DMV8 641 aaKnown RBP15.94■□□□□ 0.14
CXCL12-201ENST00000343575 HSPA1BP0DMV9 641 aaKnown RBP15.94■□□□□ 0.14
CXCL12-201ENST00000343575 HARSP12081 509 aaKnown RBP15.94■□□□□ 0.14
CXCL12-201ENST00000343575 SLC9A1P19634 815 aa15.94■□□□□ 0.14
CXCL12-201ENST00000343575 CLDN10P78369 228 aa15.94■□□□□ 0.14
CXCL12-201ENST00000343575 MRPS6P82932 125 aaKnown RBP15.94■□□□□ 0.14
CXCL12-201ENST00000343575 PTPN11Q06124 597 aaPredicted RBP15.94■□□□□ 0.14
CXCL12-201ENST00000343575 MGAT3Q09327 533 aa15.94■□□□□ 0.14
CXCL12-201ENST00000343575 FBXO46Q6PJ61 603 aaPredicted RBP15.94■□□□□ 0.14
CXCL12-201ENST00000343575 TMEM192Q8IY95 271 aa15.94■□□□□ 0.14
CXCL12-201ENST00000343575 TMC2Q8TDI7 906 aa15.94■□□□□ 0.14
CXCL12-201ENST00000343575 CPLX3Q8WVH0 158 aa15.94■□□□□ 0.14
CXCL12-201ENST00000343575 CCDC127Q96BQ5 260 aa15.94■□□□□ 0.14
CXCL12-201ENST00000343575 TCHPQ9BT92 498 aa15.94■□□□□ 0.14
CXCL12-201ENST00000343575 KIAA1586Q9HCI6 787 aa15.94■□□□□ 0.14
CXCL12-201ENST00000343575 STARD7Q9NQZ5 370 aa15.94■□□□□ 0.14
CXCL12-201ENST00000343575 TOPORSQ9NS56 1045 aaPredicted RBP15.94■□□□□ 0.14
CXCL12-201ENST00000343575 CPSF3Q9UKF6 684 aaKnown RBP15.94■□□□□ 0.14
CXCL12-201ENST00000343575 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.94■□□□□ 0.14
CXCL12-201ENST00000343575 PTPRJQ12913 1337 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 OGTO15294 1046 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 LRRN2O75325 713 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 LDHAP00338 332 aaKnown RBP15.93■□□□□ 0.14
CXCL12-201ENST00000343575 KRT13P13646 458 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 PON1P27169 355 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 ZNF568Q3ZCX4 644 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 LMO3Q8TAP4 145 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 ZNF516Q92618 1163 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 PPP1R13BQ96KQ4 1090 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 SENP6Q9GZR1 1112 aaPredicted RBP15.93■□□□□ 0.14
CXCL12-201ENST00000343575 CRISPLD2Q9H0B8 497 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 TRPV6Q9H1D0 765 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 PDE11AQ9HCR9 933 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 AGPAT5Q9NUQ2 364 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 TRMT1Q9NXH9 659 aaKnown RBP15.93■□□□□ 0.14
CXCL12-201ENST00000343575 CDY2AQ9Y6F7 541 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 A0A0U1RQG5 324 aaPredicted RBP15.93■□□□□ 0.14
CXCL12-201ENST00000343575 GTPBP10A4D1E9 387 aaKnown RBP15.93■□□□□ 0.14
CXCL12-201ENST00000343575 KBTBD13C9JR72 458 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 B4GALT4O60513 344 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 ERLIN2O94905 339 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 ACTN1P12814 892 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 MATR3P43243 847 aaKnown RBP eCLIP15.93■□□□□ 0.14
CXCL12-201ENST00000343575 GCLMP48507 274 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 CDK7P50613 346 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 PSMD6Q15008 389 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 FIGNQ5HY92 759 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 TMEM139Q8IV31 216 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 THNSL1Q8IYQ7 743 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 TMEM117Q9H0C3 514 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 TMX1Q9H3N1 280 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 MMRN2Q9H8L6 949 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 SIX2Q9NPC8 291 aa15.93■□□□□ 0.14
CXCL12-201ENST00000343575 FAM207AQ9NSI2 230 aaPredicted RBP15.93■□□□□ 0.14
CXCL12-201ENST00000343575 NOC2LQ9Y3T9 749 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 461.8 ms