RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 TBC1D10AQ9BXI6 508 aa17.35■□□□□ 0.37
CCDC8-201ENST00000307522 CYP39A1Q9NYL5 469 aa17.35■□□□□ 0.37
CCDC8-201ENST00000307522 NAGPAQ9UK23 515 aa17.35■□□□□ 0.37
CCDC8-201ENST00000307522 ZNF831Q5JPB2 1677 aa17.35■□□□□ 0.37
CCDC8-201ENST00000307522 UNC5CO95185 931 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 SNHG28P0DPA3 235 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 EIF3BP55884 814 aaKnown RBP17.34■□□□□ 0.37
CCDC8-201ENST00000307522 DEUP1Q05D60 604 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 SYDE2Q5VT97 1194 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 ZNF341Q9BYN7 854 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 TRIM7Q9C029 511 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 CUEDC2Q9H467 287 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 LRRC42Q9Y546 428 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 IGSF9BQ9UPX0 1349 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 OAS1P00973 400 aaKnown RBP17.34■□□□□ 0.37
CCDC8-201ENST00000307522 FAM163BP0C2L3 166 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 TPP2P29144 1249 aaPredicted RBP17.34■□□□□ 0.37
CCDC8-201ENST00000307522 GSTT1P30711 240 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 TMEM266Q2M3C6 531 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 TSNAXIP1Q2TAA8 658 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 OR52E8Q6IFG1 317 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 TMEM179Q6ZVK1 233 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 CPNE8Q86YQ8 564 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 CYP4X1Q8N118 509 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 JDP2Q8WYK2 163 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 DHX36Q9H2U1 1008 aaKnown RBP17.34■□□□□ 0.37
CCDC8-201ENST00000307522 RIC8AQ9NPQ8 531 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 TCRBV7S2A1N4TA0A589 114 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 KRT36O76013 467 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 GPATCH4Q5T3I0 446 aaKnown RBP17.34■□□□□ 0.37
CCDC8-201ENST00000307522 SV2BQ7L1I2 683 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 COL4A3BPQ9Y5P4 624 aa17.34■□□□□ 0.37
CCDC8-201ENST00000307522 PFASO15067 1338 aa17.33■□□□□ 0.37
CCDC8-201ENST00000307522 MEIS2O14770 477 aa17.33■□□□□ 0.37
CCDC8-201ENST00000307522 CETN3O15182 167 aa17.33■□□□□ 0.37
CCDC8-201ENST00000307522 NVLO15381 856 aaKnown RBP17.33■□□□□ 0.37
CCDC8-201ENST00000307522 GFPT2O94808 682 aa17.33■□□□□ 0.37
CCDC8-201ENST00000307522 FGFR1OPO95684 399 aaKnown RBP17.33■□□□□ 0.37
CCDC8-201ENST00000307522 BRAFP15056 766 aa17.33■□□□□ 0.37
CCDC8-201ENST00000307522 CTTNQ14247 550 aaKnown RBP17.33■□□□□ 0.37
CCDC8-201ENST00000307522 HP1BP3Q5SSJ5 553 aaPredicted RBP17.33■□□□□ 0.37
CCDC8-201ENST00000307522 VSTM1Q6UX27 236 aa17.33■□□□□ 0.37
CCDC8-201ENST00000307522 CAPN12Q6ZSI9 719 aa17.33■□□□□ 0.37
CCDC8-201ENST00000307522 TEX9Q8N6V9 391 aa17.33■□□□□ 0.37
CCDC8-201ENST00000307522 LARP4BQ92615 738 aaKnown RBP17.33■□□□□ 0.37
CCDC8-201ENST00000307522 PGM2Q96G03 612 aa17.33■□□□□ 0.37
CCDC8-201ENST00000307522 NDNQ99608 321 aa17.33■□□□□ 0.37
CCDC8-201ENST00000307522 RCN1Q15293 331 aa17.33■□□□□ 0.36
CCDC8-201ENST00000307522 NT5DC3Q86UY8 548 aa17.33■□□□□ 0.36
CCDC8-201ENST00000307522 RBM46Q8TBY0 533 aaKnown RBP17.33■□□□□ 0.36
CCDC8-201ENST00000307522 ARMCX3Q9UH62 379 aaPredicted RBP17.33■□□□□ 0.36
CCDC8-201ENST00000307522 SCOCQ9UIL1 159 aa17.33■□□□□ 0.36
CCDC8-201ENST00000307522 LAMB1P07942 1786 aa17.33■□□□□ 0.36
CCDC8-201ENST00000307522 COL4A5P29400 1685 aa17.33■□□□□ 0.36
CCDC8-201ENST00000307522 NPTXRO95502 500 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 ARHGAP4P98171 946 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 DAGLBQ8NCG7 672 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 NLGN2Q8NFZ4 835 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 NRG4Q8WWG1 115 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 ALG3Q92685 438 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 CCDC17Q96LX7 622 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 FAM210AQ96ND0 272 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 IDI2Q9BXS1 227 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 TXLNGYQ9BZA5 131 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 ATP6V1G1O75348 118 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 MED24O75448 989 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 FOXN2P32314 431 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 DUPD1Q68J44 220 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 DSTYKQ6XUX3 929 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 MYLK4Q86YV6 388 aaPredicted RBP17.32■□□□□ 0.36
CCDC8-201ENST00000307522 GLYCTKQ8IVS8 523 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 SCG3Q8WXD2 468 aaKnown RBP17.32■□□□□ 0.36
CCDC8-201ENST00000307522 GBP5Q96PP8 586 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 MTMR9Q96QG7 549 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 PITPNM3Q9BZ71 974 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 GALNT8Q9NY28 637 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 CDK5RAP2Q96SN8 1893 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 RSPH10B2B2RC85 870 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 CCDC188H7C350 402 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 KIAA0391O15091 583 aaKnown RBP17.32■□□□□ 0.36
CCDC8-201ENST00000307522 RIPK2O43353 540 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 AGTP01019 485 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 RSPH10BP0C881 870 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 MCL1Q07820 350 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 C6orf118Q5T5N4 469 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 LRRC8CQ8TDW0 803 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 ASAP3Q8TDY4 903 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 AMNQ9BXJ7 453 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 CCSER1Q9C0I3 900 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 SLITRK6Q9H5Y7 841 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 HDAC9Q9UKV0 1011 aa17.32■□□□□ 0.36
CCDC8-201ENST00000307522 NEK3P51956 506 aa17.31■□□□□ 0.36
CCDC8-201ENST00000307522 C7orf25Q9BPX7 421 aa17.31■□□□□ 0.36
CCDC8-201ENST00000307522 NT5C3AQ9H0P0 336 aa17.31■□□□□ 0.36
CCDC8-201ENST00000307522 DNAAF2Q9NVR5 837 aaKnown RBP17.31■□□□□ 0.36
CCDC8-201ENST00000307522 PIM2Q9P1W9 311 aa17.31■□□□□ 0.36
CCDC8-201ENST00000307522 AMFRQ9UKV5 643 aa17.31■□□□□ 0.36
CCDC8-201ENST00000307522 POU5F1Q01860 360 aaKnown RBP17.31■□□□□ 0.36
CCDC8-201ENST00000307522 SNX30Q5VWJ9 437 aa17.31■□□□□ 0.36
CCDC8-201ENST00000307522 TTC27Q6P3X3 843 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms