RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 DSEQ9UL01 958 aa11.71□□□□□ -0.53
MSH6-201ENST00000234420 MED7O43513 233 aa11.71□□□□□ -0.54
MSH6-201ENST00000234420 LRG1P02750 347 aa11.71□□□□□ -0.54
MSH6-201ENST00000234420 PLOD1Q02809 727 aaPredicted RBP11.71□□□□□ -0.54
MSH6-201ENST00000234420 PLCL1Q15111 1095 aa11.71□□□□□ -0.54
MSH6-201ENST00000234420 ZCWPW2Q504Y3 356 aa11.71□□□□□ -0.54
MSH6-201ENST00000234420 RRM2BQ7LG56 351 aa11.71□□□□□ -0.54
MSH6-201ENST00000234420 NUP93Q8N1F7 819 aa11.71□□□□□ -0.54
MSH6-201ENST00000234420 QKIQ96PU8 341 aaKnown RBP eCLIP11.71□□□□□ -0.54
MSH6-201ENST00000234420 LZTS2Q9BRK4 669 aa11.71□□□□□ -0.54
MSH6-201ENST00000234420 ECE2O60344 883 aa11.71□□□□□ -0.54
MSH6-201ENST00000234420 FGGP02679 453 aa11.71□□□□□ -0.54
MSH6-201ENST00000234420 PDIA3P30101 505 aaKnown RBP11.71□□□□□ -0.54
MSH6-201ENST00000234420 EIF4A3P38919 411 aaKnown RBP11.71□□□□□ -0.54
MSH6-201ENST00000234420 RASGRF1Q13972 1273 aa11.71□□□□□ -0.54
MSH6-201ENST00000234420 DAB2IPQ5VWQ8 1189 aa11.71□□□□□ -0.54
MSH6-201ENST00000234420 DYNLL2Q96FJ2 89 aa11.71□□□□□ -0.54
MSH6-201ENST00000234420 NOL6Q9H6R4 1146 aaKnown RBP11.71□□□□□ -0.54
MSH6-201ENST00000234420 K7ERI5 159 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 NDUFA10O95299 355 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 C4BPBP20851 252 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 SLC16A1P53985 500 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 COBLL1Q53SF7 1204 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 RTL3Q8N8U3 475 aaKnown RBP11.7□□□□□ -0.54
MSH6-201ENST00000234420 THTPAQ9BU02 230 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 DNAJC5BQ9UF47 199 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 PIN4Q9Y237 131 aaKnown RBP11.7□□□□□ -0.54
MSH6-201ENST00000234420 CLIC4Q9Y696 253 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 PYGMP11217 842 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 SMARCA1P28370 1054 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 RSBN1Q5VWQ0 802 aaPredicted RBP11.7□□□□□ -0.54
MSH6-201ENST00000234420 VN1R5Q7Z5H4 357 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 TMA16Q96EY4 203 aaKnown RBP11.7□□□□□ -0.54
MSH6-201ENST00000234420 HUNKP57058 714 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 ARID5BQ14865 1188 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 ZNF614Q8N883 585 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 CCDC134Q9H6E4 229 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 TMEM161AQ9NX61 479 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.7□□□□□ -0.54
MSH6-201ENST00000234420 KLHL8Q9P2G9 620 aaPredicted RBP11.7□□□□□ -0.54
MSH6-201ENST00000234420 MBD2Q9UBB5 411 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 HUS1O60921 280 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 GFPT2O94808 682 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 FAM200BP0CF97 657 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 LINS1Q8NG48 757 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 ETAA1Q9NY74 926 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 XDHP47989 1333 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 BMP3P12645 472 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 RIN3Q8TB24 985 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 SPRTNQ9H040 489 aaPredicted RBP11.7□□□□□ -0.54
MSH6-201ENST00000234420 MIR1-1HGQ9H1L0 117 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 CCDC80Q76M96 950 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 FAF2Q96CS3 445 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 BLOC1S6Q9UL45 172 aa11.7□□□□□ -0.54
MSH6-201ENST00000234420 GH2P01242 217 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 DARSP14868 501 aaKnown RBP11.69□□□□□ -0.54
MSH6-201ENST00000234420 ADORA1P30542 326 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 CYP2C19P33261 490 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 PMS2P54278 862 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 IL31Q6EBC2 164 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 LRRC31Q6UY01 552 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 LEMD2Q8NC56 503 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 EPN3Q9H201 632 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 RERGLQ9H628 205 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 SLC40A1Q9NP59 571 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 ESYT3A0FGR9 886 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 ARHGEF37A1IGU5 675 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 ASNA1O43681 348 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 PQBP1O60828 265 aaKnown RBP11.69□□□□□ -0.54
MSH6-201ENST00000234420 CMA1P23946 247 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 IL12RB1P42701 662 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 NT5DC4Q86YG4 428 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 BLIDQ8IZY5 108 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 ATP6V1G3Q96LB4 118 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.69□□□□□ -0.54
MSH6-201ENST00000234420 CCDC22O60826 627 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 TCN1P20061 433 aaPredicted RBP11.69□□□□□ -0.54
MSH6-201ENST00000234420 ALDH1A3P47895 512 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 TRIP4Q15650 581 aaPredicted RBP11.69□□□□□ -0.54
MSH6-201ENST00000234420 TMEM165Q9HC07 324 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 DAPK2Q9UIK4 370 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 MYO1GB0I1T2 1018 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 GUCA1CO95843 209 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 PAX7P23759 505 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 PCSK7Q16549 785 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 MFN1Q8IWA4 741 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 ZNF512Q96ME7 567 aaPredicted RBP11.69□□□□□ -0.54
MSH6-201ENST00000234420 DMAP1Q9NPF5 467 aaPredicted RBP11.69□□□□□ -0.54
MSH6-201ENST00000234420 GMEB1Q9Y692 573 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 KPNA7A9QM74 516 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 RC3H1Q5TC82 1133 aaKnown RBP11.69□□□□□ -0.54
MSH6-201ENST00000234420 E4F1Q66K89 784 aaPredicted RBP11.69□□□□□ -0.54
MSH6-201ENST00000234420 GLMNQ92990 594 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 ZBTB40Q9NUA8 1239 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.69□□□□□ -0.54
MSH6-201ENST00000234420 ENO3P13929 434 aaPredicted RBP11.69□□□□□ -0.54
MSH6-201ENST00000234420 INPP5AQ14642 412 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 SPATA21Q7Z572 469 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 LRRC39Q96DD0 335 aa11.69□□□□□ -0.54
MSH6-201ENST00000234420 ALKBH4Q9NXW9 302 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms