RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 USP27XA6NNY8 438 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 MAP4P27816 1152 aaKnown RBP9.64□□□□□ -0.87
CSMD1-218ENST00000635120 VAMP7P51809 220 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 LRRC8BQ6P9F7 803 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 RHPN2Q8IUC4 686 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 TEKT4Q8WW24 435 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 PNMA3Q9UL41 463 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 USP17L15C9J2P7 530 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 USP17L13C9JLJ4 530 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 USP17L11C9JVI0 530 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 USP17L18D6R9N7 530 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 USP17L22D6RA61 530 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 USP17L17D6RBQ6 530 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 USP17L19D6RCP7 530 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 USP17L20D6RJB6 530 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 MAP3K7CLP57077 242 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 USP17L24Q0WX57 530 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 TOB2Q14106 344 aaPredicted RBP9.64□□□□□ -0.87
CSMD1-218ENST00000635120 IZUMO3Q5VZ72 239 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 USP17L6PQ6QN14 398 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 DDX56Q9NY93 547 aaKnown RBP9.64□□□□□ -0.87
CSMD1-218ENST00000635120 ANO9A1A5B4 782 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 CDH6P55285 790 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 TNFAIP2Q03169 654 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 KRT17Q04695 432 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 KNOP1Q1ED39 458 aaKnown RBP9.64□□□□□ -0.87
CSMD1-218ENST00000635120 OSBPL5Q9H0X9 879 aaPredicted RBP9.64□□□□□ -0.87
CSMD1-218ENST00000635120 VCAM1P19320 739 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 BCAR1P56945 870 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 ZCCHC17Q9NP64 241 aaKnown RBP9.64□□□□□ -0.87
CSMD1-218ENST00000635120 HUS1O60921 280 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 ARIH2O95376 493 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 NLGN1Q8N2Q7 840 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 DHX35Q9H5Z1 703 aaKnown RBP9.64□□□□□ -0.87
CSMD1-218ENST00000635120 ATG3Q9NT62 314 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 AIPL1Q9NZN9 384 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 STAP1Q9ULZ2 295 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 NLRP1Q9C000 1473 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 GLI2P10070 1586 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 EFCAB14O75071 495 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 ATP1A1P05023 1023 aaKnown RBP9.64□□□□□ -0.87
CSMD1-218ENST00000635120 BAG6P46379 1132 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 KCNQ4P56696 695 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 ENAHQ8N8S7 591 aaPredicted RBP9.64□□□□□ -0.87
CSMD1-218ENST00000635120 RFWD2Q8NHY2 731 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 OXER1Q8TDS5 423 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 SH3KBP1Q96B97 665 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 FAM167AQ96KS9 214 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 EPN3Q9H201 632 aa9.64□□□□□ -0.87
CSMD1-218ENST00000635120 DAB1O75553 588 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 BBOX1O75936 387 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 INPP5AQ14642 412 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 PATL1Q86TB9 770 aaKnown RBP9.63□□□□□ -0.87
CSMD1-218ENST00000635120 TBC1D10CQ8IV04 446 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 USP6NLQ92738 828 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 CEP170Q5SW79 1584 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 LDHAP00338 332 aaKnown RBP9.63□□□□□ -0.87
CSMD1-218ENST00000635120 PFKFB3Q16875 520 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-218ENST00000635120 ELMSAN1Q6PJG2 1045 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 GIMAP8Q8ND71 665 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-218ENST00000635120 STK36Q9NRP7 1315 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 GFAPP14136 432 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 TYK2P29597 1187 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 EFHC2Q5JST6 749 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 THEMIS2Q5TEJ8 643 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 ADCK1Q86TW2 530 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 ZNF555Q8NEP9 628 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 PBXIP1Q96AQ6 731 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 EPC1Q9H2F5 836 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 TOPORSQ9NS56 1045 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-218ENST00000635120 ZFATQ9P243 1243 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 MARCOQ9UEW3 520 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-218ENST00000635120 NRKQ7Z2Y5 1582 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 MAP3K4Q9Y6R4 1608 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 RPAP1Q9BWH6 1393 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-218ENST00000635120 STXBP2Q15833 593 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 SAMD9LQ8IVG5 1584 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 H0Y626 953 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 TRIM16O95361 564 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 TRIM49P0CI25 452 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 TRIM49CP0CI26 452 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 STX19Q8N4C7 294 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 MAD2L2Q9UI95 211 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 HSPA9P38646 679 aaKnown RBP9.63□□□□□ -0.87
CSMD1-218ENST00000635120 STAT3P40763 770 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 AARS2Q5JTZ9 985 aaKnown RBP9.63□□□□□ -0.87
CSMD1-218ENST00000635120 ANKMY2Q8IV38 441 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 BEST2Q8NFU1 509 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 PKD2L2Q9NZM6 624 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 CACNB3P54284 484 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 SYCP2LQ5T4T6 812 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 TMEM179Q6ZVK1 233 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 MS4A14Q96JA4 679 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 ZCCHC11Q5TAX3 1644 aaKnown RBP9.63□□□□□ -0.87
CSMD1-218ENST00000635120 VIRMAQ69YN4 1812 aaKnown RBP9.63□□□□□ -0.87
CSMD1-218ENST00000635120 PRR23D1E9PI22 279 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-218ENST00000635120 CCDC22O60826 627 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 WDR47O94967 919 aa9.63□□□□□ -0.87
CSMD1-218ENST00000635120 PRR23D2P0DMB1 279 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-218ENST00000635120 AP3B2Q13367 1082 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms