RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 IRF2BP1Q8IU81 584 aa15.57■□□□□ 0.08
VPS36-207ENST00000611132 PIP4K2CQ8TBX8 421 aa15.57■□□□□ 0.08
VPS36-207ENST00000611132 ZSWIM1Q9BR11 485 aa15.57■□□□□ 0.08
VPS36-207ENST00000611132 MKNK1Q9BUB5 465 aa15.57■□□□□ 0.08
VPS36-207ENST00000611132 CYP11B2P19099 503 aa15.57■□□□□ 0.08
VPS36-207ENST00000611132 HNRNPH3P31942 346 aaKnown RBP15.57■□□□□ 0.08
VPS36-207ENST00000611132 OSGEPQ9NPF4 335 aa15.57■□□□□ 0.08
VPS36-207ENST00000611132 IRAK4Q9NWZ3 460 aa15.57■□□□□ 0.08
VPS36-207ENST00000611132 AKR1B1P15121 316 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 TARSP26639 723 aaKnown RBP15.56■□□□□ 0.08
VPS36-207ENST00000611132 STAT2P52630 851 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 KCNMA1Q12791 1236 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 MIIPQ5JXC2 388 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 APLFQ8IW19 511 aaPredicted RBP15.56■□□□□ 0.08
VPS36-207ENST00000611132 RIBC1Q8N443 379 aaPredicted RBP15.56■□□□□ 0.08
VPS36-207ENST00000611132 PGM2Q96G03 612 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 CFAP36Q96G28 342 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 FOXP3Q9BZS1 431 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 MTMR4Q9NYA4 1195 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 CNOT7Q9UIV1 285 aaKnown RBP15.56■□□□□ 0.08
VPS36-207ENST00000611132 TMEM191BP0C7N4 346 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 NCF2P19878 526 aaPredicted RBP15.56■□□□□ 0.08
VPS36-207ENST00000611132 GARSP41250 739 aaKnown RBP15.56■□□□□ 0.08
VPS36-207ENST00000611132 SLC1A1P43005 524 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 ARSEP51690 589 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 ZNF543Q08ER8 600 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 SMYD3Q9H7B4 428 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 PI4KBQ9UBF8 816 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 VHLP40337 213 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 TMED1Q13445 227 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 ARHGEF16Q5VV41 709 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 DNAAF5Q86Y56 855 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 TTC13Q8NBP0 860 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 ADAM33Q9BZ11 813 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 RXFP1Q9HBX9 757 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 BCS1LQ9Y276 419 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 EPHB6O15197 1021 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 TLR3O15455 904 aaKnown RBP15.56■□□□□ 0.08
VPS36-207ENST00000611132 MYBL1P10243 752 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 ADGRA1Q86SQ6 560 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 PASD1Q8IV76 773 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 KCTD6Q8NC69 237 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 CEP170P1Q96L14 293 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 MIS12Q9H081 205 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 CD209Q9NNX6 404 aa15.56■□□□□ 0.08
VPS36-207ENST00000611132 ALG13Q9NP73 1137 aaKnown RBP15.56■□□□□ 0.08
VPS36-207ENST00000611132 TNNC2P02585 160 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 EPHB1P54762 984 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 ATP6V0A1Q93050 837 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 LRGUKQ96M69 825 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 ANKRD27Q96NW4 1050 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 MAGEA4P43358 317 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 POLGP54098 1239 aaPredicted RBP15.55■□□□□ 0.08
VPS36-207ENST00000611132 P3H1Q32P28 736 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 KAT2BQ92831 832 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 C8orf37Q96NL8 207 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 PPP1R1BQ9UD71 204 aaPredicted RBP15.55■□□□□ 0.08
VPS36-207ENST00000611132 APOBEC2Q9Y235 224 aaKnown RBP15.55■□□□□ 0.08
VPS36-207ENST00000611132 GMNNO75496 209 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 KRT38O76015 456 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 P4HA1P13674 534 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 KCNQ4P56696 695 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 IFI35P80217 286 aaPredicted RBP15.55■□□□□ 0.08
VPS36-207ENST00000611132 FAM98CQ17RN3 349 aaKnown RBP15.55■□□□□ 0.08
VPS36-207ENST00000611132 ANKRD20A4Q4UJ75 823 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 ANKRD20A2Q5SQ80 823 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 ANKRD20A1Q5TYW2 823 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 FBXO33Q7Z6M2 555 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 CENPTQ96BT3 561 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 MAGEB18Q96M61 343 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 SERPINI1Q99574 410 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 CDC42EP4Q9H3Q1 356 aaKnown RBP15.55■□□□□ 0.08
VPS36-207ENST00000611132 EPS15L1Q9UBC2 864 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 HAO1Q9UJM8 370 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 BBOX1O75936 387 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 RGS9BPQ6ZS82 235 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 SUPT20HQ8NEM7 779 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 DTNBP1Q96EV8 351 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 SRP68Q9UHB9 627 aaKnown RBP15.55■□□□□ 0.08
VPS36-207ENST00000611132 NEU2Q9Y3R4 380 aa15.55■□□□□ 0.08
VPS36-207ENST00000611132 FECHP22830 423 aa15.54■□□□□ 0.08
VPS36-207ENST00000611132 RPA1P27694 616 aa15.54■□□□□ 0.08
VPS36-207ENST00000611132 ESRRGP62508 458 aa15.54■□□□□ 0.08
VPS36-207ENST00000611132 HIF1AQ16665 826 aa15.54■□□□□ 0.08
VPS36-207ENST00000611132 CRELD2Q6UXH1 353 aaPredicted RBP15.54■□□□□ 0.08
VPS36-207ENST00000611132 SLC30A5Q8TAD4 765 aa15.54■□□□□ 0.08
VPS36-207ENST00000611132 SCFD1Q8WVM8 642 aa15.54■□□□□ 0.08
VPS36-207ENST00000611132 TSSK1BQ9BXA7 367 aa15.54■□□□□ 0.08
VPS36-207ENST00000611132 RANBP17Q9H2T7 1088 aaKnown RBP15.54■□□□□ 0.08
VPS36-207ENST00000611132 TBX3O15119 743 aa15.54■□□□□ 0.08
VPS36-207ENST00000611132 SF3B3Q15393 1217 aaKnown RBP15.54■□□□□ 0.08
VPS36-207ENST00000611132 ERMARDQ5T6L9 678 aa15.54■□□□□ 0.08
VPS36-207ENST00000611132 RPS6KC1Q96S38 1066 aa15.54■□□□□ 0.08
VPS36-207ENST00000611132 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.54■□□□□ 0.08
VPS36-207ENST00000611132 GOLGA8RI6L899 631 aa15.54■□□□□ 0.08
VPS36-207ENST00000611132 ATMINO43313 823 aaPredicted RBP15.54■□□□□ 0.08
VPS36-207ENST00000611132 KITP10721 976 aa15.54■□□□□ 0.08
VPS36-207ENST00000611132 SERPINB4P48594 390 aa15.54■□□□□ 0.08
VPS36-207ENST00000611132 ALDH5A1P51649 535 aaPredicted RBP15.54■□□□□ 0.08
VPS36-207ENST00000611132 PDCD2Q16342 344 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms