RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 NID2Q14112 1375 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 CFAP47Q6ZTR5 3102 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 NRP1O14786 923 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 GAS7O60861 476 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 DCNP07585 359 aaKnown RBP9.75□□□□□ -0.85
SMAD4-215ENST00000592911 AK2P54819 239 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 POU5F1BQ06416 359 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 MLF2Q15773 248 aaPredicted RBP9.75□□□□□ -0.85
SMAD4-215ENST00000592911 PRR16Q569H4 304 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 KANK3Q6NY19 840 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 PDXDC1Q6P996 788 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 LILRA6Q6PI73 481 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 MOXD1Q6UVY6 613 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 AGMOQ6ZNB7 445 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 COLGALT2Q8IYK4 626 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 HACE1Q8IYU2 909 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 CCDC82Q8N4S0 544 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 NETO1Q8TDF5 533 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 RIN2Q8WYP3 895 aaPredicted RBP9.75□□□□□ -0.85
SMAD4-215ENST00000592911 SLC5A5Q92911 643 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 LENG9Q96B70 501 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 PGBD1Q96JS3 809 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 COLEC11Q9BWP8 271 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 TEKT3Q9BXF9 490 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 PIDD1Q9HB75 910 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 PRMT8Q9NR22 394 aaPredicted RBP9.75□□□□□ -0.85
SMAD4-215ENST00000592911 DNAJB4Q9UDY4 337 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 GMEB2Q9UKD1 530 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 CDH7Q9ULB5 785 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 KCNH3Q9ULD8 1083 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 INPP5FQ9Y2H2 1132 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 NUMBLQ9Y6R0 609 aa9.75□□□□□ -0.85
SMAD4-215ENST00000592911 V9GY48 417 aaPredicted RBP9.75□□□□□ -0.85
SMAD4-215ENST00000592911 A0A087WZ62 844 aa9.74□□□□□ -0.85
SMAD4-215ENST00000592911 hCG_1642624A0A1W2PR95 340 aa9.74□□□□□ -0.85
SMAD4-215ENST00000592911 ZMYND10O75800 440 aa9.74□□□□□ -0.85
SMAD4-215ENST00000592911 IGHDP01880 384 aa9.74□□□□□ -0.85
SMAD4-215ENST00000592911 HMGB1P09429 215 aaKnown RBP9.74□□□□□ -0.85
SMAD4-215ENST00000592911 RXRAP19793 462 aa9.74□□□□□ -0.85
SMAD4-215ENST00000592911 NECTIN1Q15223 517 aa9.74□□□□□ -0.85
SMAD4-215ENST00000592911 ST3GAL2Q16842 350 aa9.74□□□□□ -0.85
SMAD4-215ENST00000592911 USP41Q3LFD5 358 aa9.74□□□□□ -0.85
SMAD4-215ENST00000592911 TSGA10IPQ3SY00 556 aa9.74□□□□□ -0.85
SMAD4-215ENST00000592911 ZBTB41Q5SVQ8 909 aa9.74□□□□□ -0.85
SMAD4-215ENST00000592911 C1orf228Q6PIY5 440 aa9.74□□□□□ -0.85
SMAD4-215ENST00000592911 B3GNT9Q6UX72 402 aa9.74□□□□□ -0.85
SMAD4-215ENST00000592911 ZNF280BQ86YH2 543 aa9.74□□□□□ -0.85
SMAD4-215ENST00000592911 RSAD2Q8WXG1 361 aa9.74□□□□□ -0.85
SMAD4-215ENST00000592911 SLC7A3Q8WY07 619 aa9.74□□□□□ -0.85
SMAD4-215ENST00000592911 FDXACB1Q9BRP7 624 aaPredicted RBP9.74□□□□□ -0.85
SMAD4-215ENST00000592911 IFT122Q9HBG6 1241 aa9.74□□□□□ -0.85
SMAD4-215ENST00000592911 SPATA6Q9NWH7 488 aaPredicted RBP9.74□□□□□ -0.85
SMAD4-215ENST00000592911 MARCH5Q9NX47 278 aa9.74□□□□□ -0.85
SMAD4-215ENST00000592911 SUCLA2Q9P2R7 463 aaPredicted RBP9.74□□□□□ -0.85
SMAD4-215ENST00000592911 SMG5Q9UPR3 1016 aaKnown RBP9.74□□□□□ -0.85
SMAD4-215ENST00000592911 GIT1Q9Y2X7 761 aa9.74□□□□□ -0.85
SMAD4-215ENST00000592911 BAHCC1Q9P281 2608 aa9.74□□□□□ -0.85
SMAD4-215ENST00000592911 GREB1Q4ZG55 1949 aa9.74□□□□□ -0.85
SMAD4-215ENST00000592911 NOTCH4Q99466 2003 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 CYP3A7-CYP3A51PA0A087WV96 503 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 SLC30A4O14863 429 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 SLC27A2O14975 620 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 TGM5O43548 720 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 XYLBO75191 536 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 PSMD10O75832 226 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 KRT37O76014 449 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 DDHD2O94830 711 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 GLULP15104 373 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 FSHRP23945 695 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 CYP3A7P24462 503 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 RFC5P40937 340 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 NCBP1Q09161 790 aaKnown RBP9.73□□□□□ -0.85
SMAD4-215ENST00000592911 KRT32Q14532 448 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 UVSSAQ2YD98 709 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 Q4G0T1 1027 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 SPECC1Q5M775 1068 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 LRCH2Q5VUJ6 765 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 JAKMIP3Q5VZ66 844 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 LAIR1Q6GTX8 287 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 DHX32Q7L7V1 743 aaKnown RBP9.73□□□□□ -0.85
SMAD4-215ENST00000592911 RHPN2Q8IUC4 686 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 FBXL16Q8N461 479 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 CELF5Q8N6W0 485 aaKnown RBP9.73□□□□□ -0.85
SMAD4-215ENST00000592911 TCP11Q8WWU5 503 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 PSPC1Q8WXF1 523 aaKnown RBP9.73□□□□□ -0.85
SMAD4-215ENST00000592911 DNASE1L2Q92874 299 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 LPPQ93052 612 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 HS3ST6Q96QI5 342 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 LSG1Q9H089 658 aaKnown RBP9.73□□□□□ -0.85
SMAD4-215ENST00000592911 GBP3Q9H0R5 595 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 LTB4R2Q9NPC1 389 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 AVENQ9NQS1 362 aaPredicted RBP9.73□□□□□ -0.85
SMAD4-215ENST00000592911 SH3GLB2Q9NR46 395 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 SEPT9Q9UHD8 586 aaPredicted RBP9.73□□□□□ -0.85
SMAD4-215ENST00000592911 FBXW11Q9UKB1 542 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 COL4A3BPQ9Y5P4 624 aa9.73□□□□□ -0.85
SMAD4-215ENST00000592911 MAN2B1O00754 1011 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 MSH4O15457 936 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 PRPF3O43395 683 aaKnown RBP9.72□□□□□ -0.85
SMAD4-215ENST00000592911 ECI2O75521 394 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms