RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 SNX13Q9Y5W8 968 aa7.1□□□□□ -1.27
VPS29-210ENST00000552130 SOS1Q07889 1333 aaPredicted RBP7.09□□□□□ -1.27
VPS29-210ENST00000552130 A0A1W2PPH5 198 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 FITM1A5D6W6 292 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 CHURC1-FNTBB4DL54 471 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 RTCAO00442 366 aaKnown RBP7.09□□□□□ -1.27
VPS29-210ENST00000552130 HOXC11O43248 304 aaPredicted RBP7.09□□□□□ -1.27
VPS29-210ENST00000552130 PPM1BO75688 479 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 BMP7P18075 431 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 C5AR1P21730 350 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 HTR1BP28222 390 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 TNNT3P45378 269 aaPredicted RBP7.09□□□□□ -1.27
VPS29-210ENST00000552130 KRTAP10-2P60368 255 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 PDE4BQ07343 736 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 GALNT1Q10472 559 aaPredicted RBP7.09□□□□□ -1.27
VPS29-210ENST00000552130 E2F5Q15329 346 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 ANO6Q4KMQ2 910 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 TMEM177Q53S58 311 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 STYK1Q6J9G0 422 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 POMZP3Q6PJE2 187 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 UNC5DQ6UXZ4 953 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 TTLL7Q6ZT98 887 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 USP53Q70EK8 1073 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 USP45Q70EL2 814 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 GALNTL5Q7Z4T8 443 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 MTDHQ86UE4 582 aaKnown RBP7.09□□□□□ -1.27
VPS29-210ENST00000552130 TSPYL5Q86VY4 417 aaPredicted RBP7.09□□□□□ -1.27
VPS29-210ENST00000552130 EFHBQ8N7U6 833 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 ERCC4Q92889 916 aaPredicted RBP7.09□□□□□ -1.27
VPS29-210ENST00000552130 SHISA4Q96DD7 197 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 INTS4Q96HW7 963 aaKnown RBP7.09□□□□□ -1.27
VPS29-210ENST00000552130 SPATA17Q96L03 361 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 DPH2Q9BQC3 489 aaPredicted RBP7.09□□□□□ -1.27
VPS29-210ENST00000552130 SLF1Q9BQI6 1058 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 SORBS1Q9BX66 1292 aaKnown RBP7.09□□□□□ -1.27
VPS29-210ENST00000552130 OXSMQ9NWU1 459 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 DACT1Q9NYF0 836 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 LRFN1Q9P244 771 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 MTRRQ9UBK8 725 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 HDAC5Q9UQL6 1122 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 AKT3Q9Y243 479 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 EMC9Q9Y3B6 208 aa7.09□□□□□ -1.27
VPS29-210ENST00000552130 PTPDC1A2A3K4 754 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 H0Y3Z8 333 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 TGM5O43548 720 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 TADA3O75528 432 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 FGF18O76093 207 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 STARD3NLO95772 234 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 PDCP20941 246 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 TNNT2P45379 298 aaPredicted RBP7.08□□□□□ -1.28
VPS29-210ENST00000552130 KCNJ6P48051 423 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 AGFG1P52594 562 aaKnown RBP7.08□□□□□ -1.28
VPS29-210ENST00000552130 NR1H2P55055 460 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 EGR3Q06889 387 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 ZNF543Q08ER8 600 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 SCARB2Q14108 478 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 KRT32Q14532 448 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 MFSD6Q6ZSS7 791 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 MCATQ8IVS2 390 aaKnown RBP7.08□□□□□ -1.28
VPS29-210ENST00000552130 ZC3H7AQ8IWR0 971 aaKnown RBP7.08□□□□□ -1.28
VPS29-210ENST00000552130 CRACR2BQ8N4Y2 399 aaPredicted RBP7.08□□□□□ -1.28
VPS29-210ENST00000552130 OXR1Q8N573 874 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 TMEM145Q8NBT3 493 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 SIMC1Q8NDZ2 872 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 SSH1Q8WYL5 1049 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 DPF3Q92784 378 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 JAKMIP1Q96N16 626 aaKnown RBP7.08□□□□□ -1.28
VPS29-210ENST00000552130 DESI2Q9BSY9 194 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 LRFN3Q9BTN0 628 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 TXLNGYQ9BZA5 131 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 DHX36Q9H2U1 1008 aaKnown RBP7.08□□□□□ -1.28
VPS29-210ENST00000552130 ZCCHC4Q9H5U6 513 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 CYP4F11Q9HBI6 524 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 DIAPH3Q9NSV4 1193 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 WDR35Q9P2L0 1181 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 DUSP13Q9UII6 198 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 ZHX1Q9UKY1 873 aaPredicted RBP7.08□□□□□ -1.28
VPS29-210ENST00000552130 SIK3Q9Y2K2 1263 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 COQ6Q9Y2Z9 468 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 PCDHA8Q9Y5H6 950 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 PCDHA11Q9Y5I1 949 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 IKBKGQ9Y6K9 419 aa7.08□□□□□ -1.28
VPS29-210ENST00000552130 USP19O94966 1318 aa7.07□□□□□ -1.28
VPS29-210ENST00000552130 USO1O60763 962 aaKnown RBP7.07□□□□□ -1.28
VPS29-210ENST00000552130 TRIM13O60858 407 aa7.07□□□□□ -1.28
VPS29-210ENST00000552130 SOAT2O75908 522 aa7.07□□□□□ -1.28
VPS29-210ENST00000552130 DESP17661 470 aa7.07□□□□□ -1.28
VPS29-210ENST00000552130 MRE11P49959 708 aa7.07□□□□□ -1.28
VPS29-210ENST00000552130 PDE6CP51160 858 aa7.07□□□□□ -1.28
VPS29-210ENST00000552130 MECP2P51608 486 aaKnown RBP7.07□□□□□ -1.28
VPS29-210ENST00000552130 YARSP54577 528 aaKnown RBP7.07□□□□□ -1.28
VPS29-210ENST00000552130 HSD17B7P56937 341 aa7.07□□□□□ -1.28
VPS29-210ENST00000552130 UBASH3AP57075 661 aa7.07□□□□□ -1.28
VPS29-210ENST00000552130 KIF23Q02241 960 aaPredicted RBP7.07□□□□□ -1.28
VPS29-210ENST00000552130 ALDH6A1Q02252 535 aaKnown RBP7.07□□□□□ -1.28
VPS29-210ENST00000552130 ASIC2Q16515 512 aa7.07□□□□□ -1.28
VPS29-210ENST00000552130 PGS1Q32NB8 556 aa7.07□□□□□ -1.28
VPS29-210ENST00000552130 UAP1L1Q3KQV9 507 aa7.07□□□□□ -1.28
VPS29-210ENST00000552130 ZACNQ401N2 412 aa7.07□□□□□ -1.28
VPS29-210ENST00000552130 ARMC4Q5T2S8 1044 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms