RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 GADL1Q6ZQY3 521 aa5.07□□□□□ -1.6
CLK1-213ENST00000492793 Q6ZVL8 140 aa5.07□□□□□ -1.6
CLK1-213ENST00000492793 PDZD4Q76G19 769 aaPredicted RBP5.07□□□□□ -1.6
CLK1-213ENST00000492793 CMTM4Q8IZR5 234 aa5.07□□□□□ -1.6
CLK1-213ENST00000492793 GIMAP8Q8ND71 665 aaPredicted RBP5.07□□□□□ -1.6
CLK1-213ENST00000492793 SHCBP1Q8NEM2 672 aa5.07□□□□□ -1.6
CLK1-213ENST00000492793 REPS2Q8NFH8 660 aa5.07□□□□□ -1.6
CLK1-213ENST00000492793 OR7D4Q8NG98 312 aa5.07□□□□□ -1.6
CLK1-213ENST00000492793 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.07□□□□□ -1.6
CLK1-213ENST00000492793 SLC35G2Q8TBE7 412 aa5.07□□□□□ -1.6
CLK1-213ENST00000492793 STON2Q8WXE9 905 aa5.07□□□□□ -1.6
CLK1-213ENST00000492793 NEIL1Q96FI4 390 aaPredicted RBP5.07□□□□□ -1.6
CLK1-213ENST00000492793 TMEM176AQ96HP8 235 aa5.07□□□□□ -1.6
CLK1-213ENST00000492793 DPYSL5Q9BPU6 564 aa5.07□□□□□ -1.6
CLK1-213ENST00000492793 PDCD2LQ9BRP1 358 aa5.07□□□□□ -1.6
CLK1-213ENST00000492793 ZCCHC4Q9H5U6 513 aa5.07□□□□□ -1.6
CLK1-213ENST00000492793 BCO1Q9HAY6 547 aa5.07□□□□□ -1.6
CLK1-213ENST00000492793 PRDM11Q9NQV5 511 aa5.07□□□□□ -1.6
CLK1-213ENST00000492793 LANCL2Q9NS86 450 aa5.07□□□□□ -1.6
CLK1-213ENST00000492793 TMEM140Q9NV12 185 aa5.07□□□□□ -1.6
CLK1-213ENST00000492793 OBP2AQ9NY56 170 aa5.07□□□□□ -1.6
CLK1-213ENST00000492793 FRMPD2Q68DX3 1309 aaPredicted RBP5.06□□□□□ -1.6
CLK1-213ENST00000492793 UBE2QL1A1L167 161 aa5.06□□□□□ -1.6
CLK1-213ENST00000492793 SLC26A4O43511 780 aa5.06□□□□□ -1.6
CLK1-213ENST00000492793 KRT18P05783 430 aaKnown RBP5.06□□□□□ -1.6
CLK1-213ENST00000492793 RAP2AP10114 183 aa5.06□□□□□ -1.6
CLK1-213ENST00000492793 TBX4P57082 545 aa5.06□□□□□ -1.6
CLK1-213ENST00000492793 APBA1Q02410 837 aa5.06□□□□□ -1.6
CLK1-213ENST00000492793 RIN1Q13671 783 aa5.06□□□□□ -1.6
CLK1-213ENST00000492793 NFYCQ13952 458 aa5.06□□□□□ -1.6
CLK1-213ENST00000492793 GAGE13Q4V321 117 aa5.06□□□□□ -1.6
CLK1-213ENST00000492793 ATAT1Q5SQI0 421 aa5.06□□□□□ -1.6
CLK1-213ENST00000492793 KSR2Q6VAB6 950 aa5.06□□□□□ -1.6
CLK1-213ENST00000492793 TTC7BQ86TV6 843 aa5.06□□□□□ -1.6
CLK1-213ENST00000492793 CCDC146Q8IYE0 955 aa5.06□□□□□ -1.6
CLK1-213ENST00000492793 ZBTB34Q8NCN2 500 aa5.06□□□□□ -1.6
CLK1-213ENST00000492793 DIS3LQ8TF46 1054 aaKnown RBP5.06□□□□□ -1.6
CLK1-213ENST00000492793 RABGGTAQ92696 567 aa5.06□□□□□ -1.6
CLK1-213ENST00000492793 RGMAQ96B86 450 aa5.06□□□□□ -1.6
CLK1-213ENST00000492793 C1GALT1C1Q96EU7 318 aa5.06□□□□□ -1.6
CLK1-213ENST00000492793 CLPTM1LQ96KA5 538 aa5.06□□□□□ -1.6
CLK1-213ENST00000492793 GPHA2Q96T91 129 aa5.06□□□□□ -1.6
CLK1-213ENST00000492793 ACO2Q99798 780 aaKnown RBP5.06□□□□□ -1.6
CLK1-213ENST00000492793 TCF25Q9BQ70 676 aa5.06□□□□□ -1.6
CLK1-213ENST00000492793 IL23AQ9NPF7 189 aa5.06□□□□□ -1.6
CLK1-213ENST00000492793 KMT5AQ9NQR1 393 aa5.06□□□□□ -1.6
CLK1-213ENST00000492793 AJAP1Q9UKB5 411 aaPredicted RBP5.06□□□□□ -1.6
CLK1-213ENST00000492793 RUVBL1Q9Y265 456 aaKnown RBP5.06□□□□□ -1.6
CLK1-213ENST00000492793 CFAP20Q9Y6A4 193 aaKnown RBP5.06□□□□□ -1.6
CLK1-213ENST00000492793 MYBBP1AQ9BQG0 1328 aaKnown RBP5.05□□□□□ -1.6
CLK1-213ENST00000492793 LAMTOR5O43504 91 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 CAND2O75155 1236 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 GPR32O75388 356 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 CNOT4O95628 575 aaKnown RBP5.05□□□□□ -1.6
CLK1-213ENST00000492793 CR2P20023 1033 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 CRHR1P34998 444 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 SREBF1P36956 1147 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 WASP42768 502 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 HGFACQ04756 655 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 LLGL1Q15334 1064 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 SURF1Q15526 300 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 THEMIS2Q5TEJ8 643 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 TAX1BP1Q86VP1 789 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 DENND1CQ8IV53 801 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 PRR18Q8N4B5 295 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 SH2D3CQ8N5H7 860 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 PPP1R35Q8TAP8 253 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 TIFAQ96CG3 184 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 IL17RAQ96F46 866 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 OR14A2Q96R54 314 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 TAAR9Q96RI9 348 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 SLC12A5Q9H2X9 1139 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 C1orf112Q9NSG2 853 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.05□□□□□ -1.6
CLK1-213ENST00000492793 TRPS1Q9UHF7 1281 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 DDX20Q9UHI6 824 aaKnown RBP5.05□□□□□ -1.6
CLK1-213ENST00000492793 OAZ3Q9UMX2 235 aa5.05□□□□□ -1.6
CLK1-213ENST00000492793 ZMYM3Q14202 1370 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 KRTAP4-8A0A0G2JLE6 195 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 NPEPPSL1A6NEC2 478 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 LRRC14BA6NHZ5 514 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 MTSS1O43312 755 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 GASTP01350 101 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 DDCP20711 480 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 SMARCA1P28370 1054 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 GNALP38405 381 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 SLC6A9P48067 706 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 GZMKP49863 264 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 CDC42EP1Q00587 391 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 SAFB2Q14151 953 aaKnown RBP eCLIP5.04□□□□□ -1.6
CLK1-213ENST00000492793 GRM3Q14832 879 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 KHDC1Q4VXA5 237 aaKnown RBP5.04□□□□□ -1.6
CLK1-213ENST00000492793 PRAMEF14Q5SWL7 426 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 UBXN11Q5T124 520 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 B3GNT9Q6UX72 402 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 DGKHQ86XP1 1220 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 TRMT2AQ8IZ69 625 aaKnown RBP5.04□□□□□ -1.6
CLK1-213ENST00000492793 RELTQ969Z4 430 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 CYFIP2Q96F07 1278 aa5.04□□□□□ -1.6
CLK1-213ENST00000492793 GNRHR2Q96P88 292 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms