RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 PDZK1P1A8MUH7 402 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 TRIM24O15164 1050 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 PDE5AO76074 875 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 SEC31AO94979 1220 aaKnown RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 CNPP09543 421 aaKnown RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 TTC30AQ86WT1 665 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 SPICE1Q8N0Z3 855 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 Q8N402 240 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 TTC30BQ8N4P2 665 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 CLHC1Q8NHS4 586 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 CSGALNACT1Q8TDX6 532 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 KCNIP3Q9Y2W7 256 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 GRXCR2A6NFK2 248 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 GPD2P43304 727 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 GJA8P48165 433 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 TMEM132BQ14DG7 1078 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 ARHGAP15Q53QZ3 475 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 SLC45A4Q5BKX6 768 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 ZNF557Q8N988 423 aaPredicted RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 MLKLQ8NB16 471 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 WDR36Q8NI36 951 aaKnown RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 GLG1Q92896 1179 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 RPF1Q9H9Y2 349 aaKnown RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 MLXIPQ9HAP2 919 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 PDS5AQ29RF7 1337 aaKnown RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 DCDC2CA8MYV0 355 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 HS6ST1O60243 411 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 TRPA1O75762 1119 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 TCP1P17987 556 aaKnown RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 CHRNA5P30532 468 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 HADHAP40939 763 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 CPA2P48052 419 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 CCR3P51677 355 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 CCT2P78371 535 aaKnown RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 CALCRLQ16602 461 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 ZNF699Q32M78 642 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 FAM98BQ52LJ0 330 aaKnown RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 TTC38Q5R3I4 469 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 TAS1R3Q7RTX0 852 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 TMC4Q7Z404 712 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 ZNF655Q8N720 491 aaPredicted RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 ZNF75CPQ92670 426 aaPredicted RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 CPNE2Q96FN4 548 aaPredicted RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 BCL2L14Q9BZR8 327 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 INTS7Q9NVH2 962 aaKnown RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 BTBD3Q9Y2F9 522 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 AP3D1O14617 1153 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 GCNT3O95395 438 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 MLYCDO95822 493 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 CHGBP05060 677 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 MTHFD1P11586 935 aaKnown RBP5.71□□□□□ -1.49
USF3-202ENST00000478658 VCAM1P19320 739 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 UGP2Q16851 508 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 FAM187BQ17R55 369 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 LVRNQ6Q4G3 990 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 MRPL41Q8IXM3 137 aaKnown RBP5.71□□□□□ -1.49
USF3-202ENST00000478658 GTF3C2Q8WUA4 911 aaPredicted RBP5.71□□□□□ -1.49
USF3-202ENST00000478658 CENPTQ96BT3 561 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 KLHL29Q96CT2 875 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 MAGEB10Q96LZ2 347 aaPredicted RBP5.71□□□□□ -1.49
USF3-202ENST00000478658 CDK5RAP1Q96SZ6 601 aaKnown RBP5.71□□□□□ -1.49
USF3-202ENST00000478658 MMS19Q96T76 1030 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 KLHL25Q9H0H3 589 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 DSN1Q9H410 356 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 PLEKHA5Q9HAU0 1116 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 CYP39A1Q9NYL5 469 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 BAIAP2Q9UQB8 552 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 RAPGEF2Q9Y4G8 1499 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 SFI1A8K8P3 1242 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 CCDC22O60826 627 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 TMCC2O75069 709 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 UFL1O94874 794 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 VAV1P15498 845 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 PPP2R1AP30153 589 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 PPP2R1BP30154 601 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 RCVRNP35243 200 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 QARSP47897 775 aaKnown RBP5.71□□□□□ -1.49
USF3-202ENST00000478658 SARSP49591 514 aaKnown RBP5.71□□□□□ -1.49
USF3-202ENST00000478658 LIG3P49916 1009 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 COPS2P61201 443 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 DNM1Q05193 864 aaKnown RBP5.71□□□□□ -1.49
USF3-202ENST00000478658 ATG16L2Q8NAA4 619 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 RIN2Q8WYP3 895 aaPredicted RBP5.71□□□□□ -1.49
USF3-202ENST00000478658 KRT35Q92764 455 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 SLC10A4Q96EP9 437 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 REXO5Q96IC2 774 aaKnown RBP5.71□□□□□ -1.49
USF3-202ENST00000478658 THUMPD2Q9BTF0 503 aaKnown RBP5.71□□□□□ -1.49
USF3-202ENST00000478658 C2orf40Q9H1Z8 148 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 SEMA6CQ9H3T2 930 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 AASDHPPTQ9NRN7 309 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 CRYL1Q9Y2S2 319 aa5.71□□□□□ -1.49
USF3-202ENST00000478658 TRIM64CA6NLI5 447 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 PFKFB2O60825 505 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 ERVK-10P10266 1014 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 SKIV2L2P42285 1042 aaKnown RBP5.71□□□□□ -1.5
USF3-202ENST00000478658 SLC1A6P48664 564 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 CYP24A1Q07973 514 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 FAM47CQ5HY64 1035 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 METTL13Q8N6R0 699 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 ARHGEF26Q96DR7 871 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms