RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 EPHB2P29323 1055 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 DHX34Q14147 1143 aaKnown RBP14.05□□□□□ -0.16
NUP54-201ENST00000264883 DBN1Q16643 649 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 DDX60LQ5H9U9 1706 aaKnown RBP14.05□□□□□ -0.16
NUP54-201ENST00000264883 DPY19L2Q6NUT2 758 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 ALKBH5Q6P6C2 394 aaKnown RBP14.05□□□□□ -0.16
NUP54-201ENST00000264883 FRMD5Q7Z6J6 570 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 ZC3H18Q86VM9 953 aaKnown RBP14.05□□□□□ -0.16
NUP54-201ENST00000264883 AZIN2Q96A70 460 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 GRAMD1AQ96CP6 724 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 PIGSQ96S52 555 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 MXD3Q9BW11 206 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 ROPN1BQ9BZX4 212 aaPredicted RBP14.05□□□□□ -0.16
NUP54-201ENST00000264883 ROPN1Q9HAT0 212 aaPredicted RBP14.05□□□□□ -0.16
NUP54-201ENST00000264883 PREBQ9HCU5 417 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 AMFRQ9UKV5 643 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 TMCO1Q9UM00 188 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 SLC37A4O43826 429 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 TJP3O95049 919 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 NPR1P16066 1061 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 STX2P32856 288 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 POLGP54098 1239 aaPredicted RBP14.05□□□□□ -0.16
NUP54-201ENST00000264883 MCL1Q07820 350 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 LRRC41Q15345 812 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 ZRSR2Q15696 482 aaKnown RBP14.05□□□□□ -0.16
NUP54-201ENST00000264883 RASIP1Q5U651 963 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 ANKRD23Q86SG2 305 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 SCG3Q8WXD2 468 aaKnown RBP14.05□□□□□ -0.16
NUP54-201ENST00000264883 KIAA1683Q9H0B3 1180 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 GRHL1Q9NZI5 618 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 PLIN4Q96Q06 1357 aa14.05□□□□□ -0.16
NUP54-201ENST00000264883 C10orf71Q711Q0 1435 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 POTEMA6NI47 508 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 EYA4O95677 639 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 GH1P01241 217 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 CDK8P49336 464 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 LONRF1Q17RB8 773 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 CNPY1Q3B7I2 92 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 SNX30Q5VWJ9 437 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 SP8Q8IXZ3 490 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 MAGEB18Q96M61 343 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 ERVK-5Q9HDB9 667 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 USP40Q9NVE5 1235 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 RPL26L1Q9UNX3 145 aaKnown RBP14.04□□□□□ -0.16
NUP54-201ENST00000264883 PCDHA2Q9Y5H9 948 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 SLC4A7Q9Y6M7 1214 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 TULP1O00294 542 aaPredicted RBP14.04□□□□□ -0.16
NUP54-201ENST00000264883 ECEL1O95672 775 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 ATP2B4P23634 1241 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 ATP5DP30049 168 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 ABCD1P33897 745 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 RASSF2P50749 326 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 OCRLQ01968 901 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 MAPK7Q13164 816 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 GATA6Q92908 595 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 LRRC37BQ96QE4 947 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 GLT8D2Q9H1C3 349 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 KCTD10Q9H3F6 313 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 PARP2Q9UGN5 583 aa14.04□□□□□ -0.16
NUP54-201ENST00000264883 ECE2O60344 883 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 TDP2O95551 362 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 H2AFZP0C0S5 128 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 RARGP13631 454 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 KCNH2Q12809 1159 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 USP17L2Q6R6M4 530 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 H2AFVQ71UI9 128 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 IRF2BP2Q7Z5L9 587 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 CFAP61Q8NHU2 1237 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 TGFBRAP1Q8WUH2 860 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 SLC7A6OSQ96CW6 309 aaPredicted RBP14.03□□□□□ -0.16
NUP54-201ENST00000264883 PITPNM3Q9BZ71 974 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 CARD9Q9H257 536 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 EMILIN3Q9NT22 766 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 TMEM260Q9NX78 707 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 NENFQ9UMX5 172 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 ZNF232Q9UNY5 417 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 MTMR7Q9Y216 660 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 STK24Q9Y6E0 443 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 PPEF1O14829 653 aaPredicted RBP14.03□□□□□ -0.16
NUP54-201ENST00000264883 UFL1O94874 794 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 KRT13P13646 458 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 RPL21P46778 160 aaKnown RBP14.03□□□□□ -0.16
NUP54-201ENST00000264883 ZNF449Q6P9G9 518 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 KCNK18Q7Z418 384 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 NCSTNQ92542 709 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 RUNDC3BQ96NL0 473 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 TMEM165Q9HC07 324 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 METTL14Q9HCE5 456 aaKnown RBP14.03□□□□□ -0.16
NUP54-201ENST00000264883 POLLQ9UGP5 575 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 DDX25Q9UHL0 483 aaKnown RBP14.03□□□□□ -0.16
NUP54-201ENST00000264883 GGA1Q9UJY5 639 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 TRAF3IP3Q9Y228 551 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 CHKBQ9Y259 395 aa14.03□□□□□ -0.16
NUP54-201ENST00000264883 MAPK13O15264 365 aa14.02□□□□□ -0.16
NUP54-201ENST00000264883 BRAFP15056 766 aa14.02□□□□□ -0.16
NUP54-201ENST00000264883 YARSP54577 528 aaKnown RBP14.02□□□□□ -0.16
NUP54-201ENST00000264883 SFSWAPQ12872 951 aaKnown RBP14.02□□□□□ -0.16
NUP54-201ENST00000264883 KHDC1Q4VXA5 237 aaKnown RBP14.02□□□□□ -0.16
NUP54-201ENST00000264883 ZC2HC1CQ53FD0 456 aaPredicted RBP14.02□□□□□ -0.16
NUP54-201ENST00000264883 DCAF12L1Q5VU92 463 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms