RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 FMNL3Q8IVF7 1028 aa19.69■□□□□ 0.74
VIM-201ENST00000224237 LMO3Q8TAP4 145 aa19.69■□□□□ 0.74
VIM-201ENST00000224237 ZBTB45Q96K62 511 aaPredicted RBP19.69■□□□□ 0.74
VIM-201ENST00000224237 HAPLN2Q9GZV7 340 aa19.69■□□□□ 0.74
VIM-201ENST00000224237 AP5M1Q9H0R1 490 aa19.69■□□□□ 0.74
VIM-201ENST00000224237 AKT3Q9Y243 479 aa19.69■□□□□ 0.74
VIM-201ENST00000224237 PHKA2P46019 1235 aa19.68■□□□□ 0.74
VIM-201ENST00000224237 VEGFBP49765 207 aa19.68■□□□□ 0.74
VIM-201ENST00000224237 NLRP11P59045 1033 aaKnown RBP19.68■□□□□ 0.74
VIM-201ENST00000224237 CHMP4BP1P59074 171 aa19.68■□□□□ 0.74
VIM-201ENST00000224237 SPA17Q15506 151 aa19.68■□□□□ 0.74
VIM-201ENST00000224237 SYT10Q6XYQ8 523 aa19.68■□□□□ 0.74
VIM-201ENST00000224237 MAP7D2Q96T17 732 aa19.68■□□□□ 0.74
VIM-201ENST00000224237 ACO2Q99798 780 aaKnown RBP19.68■□□□□ 0.74
VIM-201ENST00000224237 STK33Q9BYT3 514 aa19.68■□□□□ 0.74
VIM-201ENST00000224237 FZD8Q9H461 694 aa19.68■□□□□ 0.74
VIM-201ENST00000224237 BZW2Q9Y6E2 419 aaKnown RBP19.68■□□□□ 0.74
VIM-201ENST00000224237 KAT6AQ92794 2004 aa19.68■□□□□ 0.74
VIM-201ENST00000224237 INO80B-WBP1J3KQ70 363 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 ACKR2O00590 384 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 AKR1B10O60218 316 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 LCA5LO95447 670 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 SP3Q02447 781 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 TRIM32Q13049 653 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 PSMD6Q15008 389 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 MFSD14CQ5VZR4 134 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 ZNF662Q6ZS27 426 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 IFNLR1Q8IU57 520 aaPredicted RBP19.67■□□□□ 0.74
VIM-201ENST00000224237 FNBP1Q96RU3 617 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 INO80BQ9C086 356 aaPredicted RBP19.67■□□□□ 0.74
VIM-201ENST00000224237 RNF186Q9NXI6 227 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 DNAJC12Q9UKB3 198 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 COQ4Q9Y3A0 265 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 NRCAMQ92823 1304 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 DLATP10515 647 aaKnown RBP19.67■□□□□ 0.74
VIM-201ENST00000224237 ACOT2P49753 483 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 CLDN10P78369 228 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 BEX3Q00994 111 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 MBTD1Q05BQ5 628 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 KLHL30Q0D2K2 578 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 KIAA0753Q2KHM9 967 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 ASTE1Q2TB18 679 aaPredicted RBP19.67■□□□□ 0.74
VIM-201ENST00000224237 MARCH8Q5T0T0 291 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 GJB7Q6PEY0 223 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 CRELD2Q6UXH1 353 aaPredicted RBP19.67■□□□□ 0.74
VIM-201ENST00000224237 HAUS4Q9H6D7 363 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 IFT122Q9HBG6 1241 aa19.67■□□□□ 0.74
VIM-201ENST00000224237 PRMT7Q9NVM4 692 aaPredicted RBP19.67■□□□□ 0.74
VIM-201ENST00000224237 RBAKQ9NYW8 714 aaPredicted RBP19.67■□□□□ 0.74
VIM-201ENST00000224237 AJAP1Q9UKB5 411 aaPredicted RBP19.67■□□□□ 0.74
VIM-201ENST00000224237 A0A0U1RQJ8 604 aa19.66■□□□□ 0.74
VIM-201ENST00000224237 KIF5CO60282 957 aa19.66■□□□□ 0.74
VIM-201ENST00000224237 STAT1P42224 750 aa19.66■□□□□ 0.74
VIM-201ENST00000224237 MAP2K1Q02750 393 aaPredicted RBP19.66■□□□□ 0.74
VIM-201ENST00000224237 ARID5AQ03989 594 aa19.66■□□□□ 0.74
VIM-201ENST00000224237 PRPF4BQ13523 1007 aaKnown RBP19.66■□□□□ 0.74
VIM-201ENST00000224237 TSHZ1Q6ZSZ6 1077 aa19.66■□□□□ 0.74
VIM-201ENST00000224237 KIAA1328Q86T90 577 aa19.66■□□□□ 0.74
VIM-201ENST00000224237 ATRIPQ8WXE1 791 aa19.66■□□□□ 0.74
VIM-201ENST00000224237 KAT2BQ92831 832 aa19.66■□□□□ 0.74
VIM-201ENST00000224237 VTI1AQ96AJ9 217 aa19.66■□□□□ 0.74
VIM-201ENST00000224237 POP1Q99575 1024 aaKnown RBP19.66■□□□□ 0.74
VIM-201ENST00000224237 TCHPQ9BT92 498 aa19.66■□□□□ 0.74
VIM-201ENST00000224237 DNAI1Q9UI46 699 aa19.66■□□□□ 0.74
VIM-201ENST00000224237 CASP8AP2Q9UKL3 1982 aa19.66■□□□□ 0.74
VIM-201ENST00000224237 TTLL13PA6NNM8 815 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 F8VZ95 297 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 ZEB2O60315 1214 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 CYBAP13498 195 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 PRKCIP41743 596 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 ARHGAP25P42331 645 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 GNG11P61952 73 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 MCL1Q07820 350 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 MFSD10Q14728 455 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 KIF22Q14807 665 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 FAM187BQ17R55 369 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 PHLDB3Q6NSJ2 640 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 IRF2BP2Q7Z5L9 587 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 GPIHBP1Q8IV16 184 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 FBXL13Q8NEE6 735 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 LMBR1Q8WVP7 490 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 KATNAL1Q9BW62 490 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 A0A087WZ62 844 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 TULP1O00294 542 aaPredicted RBP19.65■□□□□ 0.74
VIM-201ENST00000224237 DUSP11O75319 330 aaKnown RBP19.65■□□□□ 0.74
VIM-201ENST00000224237 VTNP04004 478 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 SMIM10L2AP0DMW4 78 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 SMIM10L2BP0DMW5 78 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 FERP16591 822 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 PROZP22891 400 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 GPC3P51654 580 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 VAV2P52735 878 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 ATF7IP2Q5U623 682 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 NFRKBQ6P4R8 1299 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 MPZL3Q6UWV2 235 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 CD99L2Q8TCZ2 262 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 PPP1R16BQ96T49 567 aa19.65■□□□□ 0.74
VIM-201ENST00000224237 FDXACB1Q9BRP7 624 aaPredicted RBP19.65■□□□□ 0.74
VIM-201ENST00000224237 TOPORSQ9NS56 1045 aaPredicted RBP19.65■□□□□ 0.74
VIM-201ENST00000224237 SETD4Q9NVD3 440 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms