RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 PDE6CP51160 858 aa7.17□□□□□ -1.26
RTTN-215ENST00000639487 HIC1Q14526 733 aa7.17□□□□□ -1.26
RTTN-215ENST00000639487 ZNF658Q5TYW1 1059 aaPredicted RBP7.17□□□□□ -1.26
RTTN-215ENST00000639487 RINT1Q6NUQ1 792 aa7.17□□□□□ -1.26
RTTN-215ENST00000639487 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.17□□□□□ -1.26
RTTN-215ENST00000639487 CATSPER3Q86XQ3 398 aa7.17□□□□□ -1.26
RTTN-215ENST00000639487 RWDD2AQ9UIY3 292 aa7.17□□□□□ -1.26
RTTN-215ENST00000639487 PCDHB8Q9UN66 801 aa7.17□□□□□ -1.26
RTTN-215ENST00000639487 ADAMTS9Q9P2N4 1935 aa7.17□□□□□ -1.26
RTTN-215ENST00000639487 F8W031 263 aaPredicted RBP7.16□□□□□ -1.26
RTTN-215ENST00000639487 CHRNA1P02708 482 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 ZDHHC11BP0C7U3 371 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 SETSIPP0DME0 302 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 ZNF18P17022 549 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 ZSCAN20P17040 1043 aaPredicted RBP7.16□□□□□ -1.26
RTTN-215ENST00000639487 HOXA11P31270 313 aaPredicted RBP7.16□□□□□ -1.26
RTTN-215ENST00000639487 SSR1P43307 286 aaKnown RBP7.16□□□□□ -1.26
RTTN-215ENST00000639487 STAT5BP51692 787 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 IRX5P78411 483 aaPredicted RBP7.16□□□□□ -1.26
RTTN-215ENST00000639487 FPGSQ05932 587 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 STILQ15468 1287 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 LONRF3Q496Y0 759 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 TIGD5Q53EQ6 642 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 ZNF720Q7Z2F6 126 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 FCHSD1Q86WN1 690 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 ZNF677Q86XU0 584 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 BRSK2Q8IWQ3 736 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 ATL2Q8NHH9 583 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 SMCR8Q8TEV9 937 aaPredicted RBP7.16□□□□□ -1.26
RTTN-215ENST00000639487 LMBR1Q8WVP7 490 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 IRGQQ8WZA9 623 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 TSPAN1O60635 241 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 ABLIM3O94929 683 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 TBC1D8O95759 1140 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 ASGR1P07306 291 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 ARP10275 920 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 GABRB2P47870 512 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 AIF1P55008 147 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 DSG1Q02413 1049 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 ILF2Q12905 390 aaKnown RBP7.16□□□□□ -1.26
RTTN-215ENST00000639487 LRCH2Q5VUJ6 765 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 PLA2G4FQ68DD2 849 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 CCDC60Q8IWA6 550 aaPredicted RBP7.16□□□□□ -1.26
RTTN-215ENST00000639487 HSCBQ8IWL3 235 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 VN1R2Q8NFZ6 395 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 KCTD13Q8WZ19 329 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 MSLNLQ96KJ4 702 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 TBATAQ96M53 351 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 ZBP1Q9H171 429 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 CLSTN2Q9H4D0 955 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 TYW1Q9NV66 732 aaKnown RBP7.16□□□□□ -1.26
RTTN-215ENST00000639487 LIMA1Q9UHB6 759 aaKnown RBP7.16□□□□□ -1.26
RTTN-215ENST00000639487 COL4A3BPQ9Y5P4 624 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 PLXNB3Q9ULL4 1909 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 SF3B1O75533 1304 aaKnown RBP eCLIP7.16□□□□□ -1.26
RTTN-215ENST00000639487 TRIM43BA6NCK2 446 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 ANHXE9PGG2 379 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 H3BRB1 525 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 RBAK-RBAKDNI3L0D1 243 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 PAPSS1O43252 624 aaPredicted RBP7.16□□□□□ -1.26
RTTN-215ENST00000639487 YWHABP31946 246 aaKnown RBP7.16□□□□□ -1.26
RTTN-215ENST00000639487 MBTPS1Q14703 1052 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 PEAR1Q5VY43 1037 aaPredicted RBP7.16□□□□□ -1.26
RTTN-215ENST00000639487 SLC8B1Q6J4K2 584 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 GDF6Q6KF10 455 aaPredicted RBP7.16□□□□□ -1.26
RTTN-215ENST00000639487 FAM171BQ6P995 826 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 LILRA6Q6PI73 481 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 SHC4Q6S5L8 630 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 PSPC1Q8WXF1 523 aaKnown RBP7.16□□□□□ -1.26
RTTN-215ENST00000639487 TRIM43Q96BQ3 446 aaPredicted RBP7.16□□□□□ -1.26
RTTN-215ENST00000639487 TUT1Q9H6E5 874 aaKnown RBP7.16□□□□□ -1.26
RTTN-215ENST00000639487 PCDHGC3Q9UN70 934 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 USTQ9Y2C2 406 aa7.16□□□□□ -1.26
RTTN-215ENST00000639487 TICRRQ7Z2Z1 1910 aa7.15□□□□□ -1.26
RTTN-215ENST00000639487 TTC26A0AVF1 554 aa7.15□□□□□ -1.26
RTTN-215ENST00000639487 LOC730098B7Z3J9 87 aa7.15□□□□□ -1.26
RTTN-215ENST00000639487 TXNP10599 105 aaKnown RBP7.15□□□□□ -1.26
RTTN-215ENST00000639487 TCF7P36402 384 aaPredicted RBP7.15□□□□□ -1.26
RTTN-215ENST00000639487 DGKZQ13574 1117 aa7.15□□□□□ -1.26
RTTN-215ENST00000639487 EARS2Q5JPH6 523 aaKnown RBP7.15□□□□□ -1.26
RTTN-215ENST00000639487 ARTNQ5T4W7 220 aa7.15□□□□□ -1.26
RTTN-215ENST00000639487 SLC27A1Q6PCB7 646 aa7.15□□□□□ -1.26
RTTN-215ENST00000639487 PLPP6Q8IY26 295 aa7.15□□□□□ -1.26
RTTN-215ENST00000639487 COLGALT2Q8IYK4 626 aa7.15□□□□□ -1.26
RTTN-215ENST00000639487 RBBP8NLQ8NC74 664 aaPredicted RBP7.15□□□□□ -1.26
RTTN-215ENST00000639487 SEPT8Q92599 483 aa7.15□□□□□ -1.26
RTTN-215ENST00000639487 INSM2Q96T92 566 aaPredicted RBP7.15□□□□□ -1.26
RTTN-215ENST00000639487 TRIM9Q9C026 710 aa7.15□□□□□ -1.26
RTTN-215ENST00000639487 GZF1Q9H116 711 aaPredicted RBP7.15□□□□□ -1.26
RTTN-215ENST00000639487 NR2E3Q9Y5X4 410 aa7.15□□□□□ -1.26
RTTN-215ENST00000639487 GOLGA6CA6NDK9 693 aa7.15□□□□□ -1.27
RTTN-215ENST00000639487 GOLGA6BA6NDN3 693 aa7.15□□□□□ -1.27
RTTN-215ENST00000639487 DDX11L8A8MPP1 907 aa7.15□□□□□ -1.27
RTTN-215ENST00000639487 NPC1O15118 1278 aa7.15□□□□□ -1.27
RTTN-215ENST00000639487 EXTL3O43909 919 aa7.15□□□□□ -1.27
RTTN-215ENST00000639487 GOLGA6DP0CG33 693 aa7.15□□□□□ -1.27
RTTN-215ENST00000639487 PTPN7P35236 360 aa7.15□□□□□ -1.27
RTTN-215ENST00000639487 NEK4P51957 841 aa7.15□□□□□ -1.27
RTTN-215ENST00000639487 AKAP17AQ02040 695 aaKnown RBP7.15□□□□□ -1.27
RTTN-215ENST00000639487 EMC2Q15006 297 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms