RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 POP1Q99575 1024 aaKnown RBP20.15■□□□□ 0.82
VCX3A-203ENST00000612369 EIF2AQ9BY44 585 aaKnown RBP20.15■□□□□ 0.82
VCX3A-203ENST00000612369 BHMT2Q9H2M3 363 aa20.15■□□□□ 0.82
VCX3A-203ENST00000612369 CD320Q9NPF0 282 aa20.15■□□□□ 0.82
VCX3A-203ENST00000612369 DDX19AQ9NUU7 478 aaKnown RBP20.15■□□□□ 0.82
VCX3A-203ENST00000612369 DNM3Q9UQ16 869 aa20.15■□□□□ 0.82
VCX3A-203ENST00000612369 GIT1Q9Y2X7 761 aa20.15■□□□□ 0.82
VCX3A-203ENST00000612369 IRAK3Q9Y616 596 aa20.15■□□□□ 0.82
VCX3A-203ENST00000612369 ZMYM2Q9UBW7 1377 aa20.14■□□□□ 0.81
VCX3A-203ENST00000612369 C19orf67A6NJJ6 358 aa20.14■□□□□ 0.81
VCX3A-203ENST00000612369 HIDE1A8MVS5 230 aa20.14■□□□□ 0.81
VCX3A-203ENST00000612369 SSTR3P32745 418 aaPredicted RBP20.14■□□□□ 0.81
VCX3A-203ENST00000612369 ZP2Q05996 745 aa20.14■□□□□ 0.81
VCX3A-203ENST00000612369 ARL6IP4Q66PJ3 421 aaKnown RBP20.14■□□□□ 0.81
VCX3A-203ENST00000612369 ZNF280BQ86YH2 543 aa20.14■□□□□ 0.81
VCX3A-203ENST00000612369 VPS52Q8N1B4 723 aa20.14■□□□□ 0.81
VCX3A-203ENST00000612369 IFT74Q96LB3 600 aa20.14■□□□□ 0.81
VCX3A-203ENST00000612369 GBP3Q9H0R5 595 aa20.14■□□□□ 0.81
VCX3A-203ENST00000612369 DNAJB4Q9UDY4 337 aa20.14■□□□□ 0.81
VCX3A-203ENST00000612369 BARX2Q9UMQ3 279 aaPredicted RBP20.14■□□□□ 0.81
VCX3A-203ENST00000612369 C2orf71A6NGG8 1288 aa20.13■□□□□ 0.81
VCX3A-203ENST00000612369 ARL5CA6NH57 179 aa20.13■□□□□ 0.81
VCX3A-203ENST00000612369 B4GALT5O43286 388 aa20.13■□□□□ 0.81
VCX3A-203ENST00000612369 DDHD2O94830 711 aa20.13■□□□□ 0.81
VCX3A-203ENST00000612369 POMCP01189 267 aa20.13■□□□□ 0.81
VCX3A-203ENST00000612369 SLC11A1P49279 550 aa20.13■□□□□ 0.81
VCX3A-203ENST00000612369 IL17AQ16552 155 aa20.13■□□□□ 0.81
VCX3A-203ENST00000612369 MAPK6Q16659 721 aa20.13■□□□□ 0.81
VCX3A-203ENST00000612369 ZBP1Q9H171 429 aa20.13■□□□□ 0.81
VCX3A-203ENST00000612369 RNF39Q9H2S5 420 aa20.13■□□□□ 0.81
VCX3A-203ENST00000612369 FAN1Q9Y2M0 1017 aa20.13■□□□□ 0.81
VCX3A-203ENST00000612369 PI4K2BG5E9Z4 385 aa20.12■□□□□ 0.81
VCX3A-203ENST00000612369 N4BP3O15049 544 aa20.12■□□□□ 0.81
VCX3A-203ENST00000612369 CXCL14O95715 111 aa20.12■□□□□ 0.81
VCX3A-203ENST00000612369 CTSAP10619 480 aa20.12■□□□□ 0.81
VCX3A-203ENST00000612369 HOXB8P17481 243 aaPredicted RBP20.12■□□□□ 0.81
VCX3A-203ENST00000612369 AFF1P51825 1210 aaKnown RBP20.12■□□□□ 0.81
VCX3A-203ENST00000612369 EFNA5P52803 228 aa20.12■□□□□ 0.81
VCX3A-203ENST00000612369 CUL4AQ13619 759 aa20.12■□□□□ 0.81
VCX3A-203ENST00000612369 TMEM173Q86WV6 379 aaPredicted RBP20.12■□□□□ 0.81
VCX3A-203ENST00000612369 VN1R2Q8NFZ6 395 aa20.12■□□□□ 0.81
VCX3A-203ENST00000612369 DEPTORQ8TB45 409 aa20.12■□□□□ 0.81
VCX3A-203ENST00000612369 BSNDQ8WZ55 320 aa20.12■□□□□ 0.81
VCX3A-203ENST00000612369 CASP10Q92851 521 aa20.12■□□□□ 0.81
VCX3A-203ENST00000612369 GAD1Q99259 594 aa20.12■□□□□ 0.81
VCX3A-203ENST00000612369 BACH2Q9BYV9 841 aa20.12■□□□□ 0.81
VCX3A-203ENST00000612369 ACKR2O00590 384 aa20.11■□□□□ 0.81
VCX3A-203ENST00000612369 NRP1O14786 923 aa20.11■□□□□ 0.81
VCX3A-203ENST00000612369 NR1I2O75469 434 aa20.11■□□□□ 0.81
VCX3A-203ENST00000612369 NPTXRO95502 500 aa20.11■□□□□ 0.81
VCX3A-203ENST00000612369 MLH1P40692 756 aa20.11■□□□□ 0.81
VCX3A-203ENST00000612369 PRPF4BQ13523 1007 aaKnown RBP20.11■□□□□ 0.81
VCX3A-203ENST00000612369 BRAPQ7Z569 592 aa20.11■□□□□ 0.81
VCX3A-203ENST00000612369 CCDC113Q9H0I3 377 aa20.11■□□□□ 0.81
VCX3A-203ENST00000612369 NT5C3AQ9H0P0 336 aa20.11■□□□□ 0.81
VCX3A-203ENST00000612369 NXF3Q9H4D5 531 aaKnown RBP20.11■□□□□ 0.81
VCX3A-203ENST00000612369 EPHX3Q9H6B9 360 aa20.11■□□□□ 0.81
VCX3A-203ENST00000612369 HES2Q9Y543 173 aa20.11■□□□□ 0.81
VCX3A-203ENST00000612369 PP2D1A8MPX8 630 aa20.1■□□□□ 0.81
VCX3A-203ENST00000612369 E9PMD0 336 aa20.1■□□□□ 0.81
VCX3A-203ENST00000612369 B4GALT3O60512 393 aa20.1■□□□□ 0.81
VCX3A-203ENST00000612369 PRKCBP05771 671 aa20.1■□□□□ 0.81
VCX3A-203ENST00000612369 ALADP13716 330 aa20.1■□□□□ 0.81
VCX3A-203ENST00000612369 PDCP20941 246 aa20.1■□□□□ 0.81
VCX3A-203ENST00000612369 CDC25AP30304 524 aa20.1■□□□□ 0.81
VCX3A-203ENST00000612369 DSC1Q08554 894 aa20.1■□□□□ 0.81
VCX3A-203ENST00000612369 HYIQ5T013 277 aa20.1■□□□□ 0.81
VCX3A-203ENST00000612369 ANKRD54Q6NXT1 300 aa20.1■□□□□ 0.81
VCX3A-203ENST00000612369 COLGALT2Q8IYK4 626 aa20.1■□□□□ 0.81
VCX3A-203ENST00000612369 TMEM87AQ8NBN3 555 aa20.1■□□□□ 0.81
VCX3A-203ENST00000612369 BCL7CQ8WUZ0 217 aaPredicted RBP20.1■□□□□ 0.81
VCX3A-203ENST00000612369 ADPGKQ9BRR6 497 aa20.1■□□□□ 0.81
VCX3A-203ENST00000612369 MMTAG2Q9BU76 263 aaKnown RBP20.1■□□□□ 0.81
VCX3A-203ENST00000612369 TIPINQ9BVW5 301 aa20.1■□□□□ 0.81
VCX3A-203ENST00000612369 APOL6Q9BWW8 343 aa20.1■□□□□ 0.81
VCX3A-203ENST00000612369 PHLPP2Q6ZVD8 1323 aa20.09■□□□□ 0.81
VCX3A-203ENST00000612369 SLC26A4O43511 780 aa20.09■□□□□ 0.81
VCX3A-203ENST00000612369 CLASP2O75122 1294 aaKnown RBP20.09■□□□□ 0.81
VCX3A-203ENST00000612369 BMP15O95972 392 aa20.09■□□□□ 0.81
VCX3A-203ENST00000612369 CA8P35219 290 aa20.09■□□□□ 0.81
VCX3A-203ENST00000612369 SCNN1GP51170 649 aa20.09■□□□□ 0.81
VCX3A-203ENST00000612369 RBM10P98175 930 aaKnown RBP20.09■□□□□ 0.81
VCX3A-203ENST00000612369 TMEM132AQ24JP5 1023 aa20.09■□□□□ 0.81
VCX3A-203ENST00000612369 CDR2LQ86X02 465 aaPredicted RBP20.09■□□□□ 0.81
VCX3A-203ENST00000612369 KHSRPQ92945 711 aaKnown RBP eCLIP20.09■□□□□ 0.81
VCX3A-203ENST00000612369 AK8Q96MA6 479 aa20.09■□□□□ 0.81
VCX3A-203ENST00000612369 DRC1Q96MC2 740 aa20.09■□□□□ 0.81
VCX3A-203ENST00000612369 ZFP42Q96MM3 310 aa20.09■□□□□ 0.81
VCX3A-203ENST00000612369 C17orf75Q9HAS0 396 aa20.09■□□□□ 0.81
VCX3A-203ENST00000612369 MIOSQ9NXC5 875 aa20.09■□□□□ 0.81
VCX3A-203ENST00000612369 KCNG1Q9UIX4 513 aa20.09■□□□□ 0.81
VCX3A-203ENST00000612369 USP15Q9Y4E8 981 aaPredicted RBP20.09■□□□□ 0.81
VCX3A-203ENST00000612369 HCFC2Q9Y5Z7 792 aa20.09■□□□□ 0.81
VCX3A-203ENST00000612369 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.08■□□□□ 0.81
VCX3A-203ENST00000612369 VWA3AA6NCI4 1184 aa20.08■□□□□ 0.81
VCX3A-203ENST00000612369 AKAP5P24588 427 aa20.08■□□□□ 0.81
VCX3A-203ENST00000612369 OR1G1P47890 313 aa20.08■□□□□ 0.81
VCX3A-203ENST00000612369 GRIK3Q13003 919 aa20.08■□□□□ 0.81
VCX3A-203ENST00000612369 TPRNQ4KMQ1 711 aa20.08■□□□□ 0.81
VCX3A-203ENST00000612369 RINT1Q6NUQ1 792 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms