RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 PALB2Q86YC2 1186 aa21.1■□□□□ 0.97
CDH5-204ENST00000563425 SLC20A1Q8WUM9 679 aa21.1■□□□□ 0.97
CDH5-204ENST00000563425 POMGNT1Q8WZA1 660 aa21.1■□□□□ 0.97
CDH5-204ENST00000563425 SEMA4DQ92854 862 aa21.1■□□□□ 0.97
CDH5-204ENST00000563425 CCDC127Q96BQ5 260 aa21.1■□□□□ 0.97
CDH5-204ENST00000563425 TMEM8AQ9HCN3 771 aa21.1■□□□□ 0.97
CDH5-204ENST00000563425 TAS2R14Q9NYV8 317 aa21.1■□□□□ 0.97
CDH5-204ENST00000563425 ANKRD62A6NC57 917 aa21.1■□□□□ 0.97
CDH5-204ENST00000563425 AARSP49588 968 aaKnown RBP eCLIP21.1■□□□□ 0.97
CDH5-204ENST00000563425 MRPS25P82663 173 aaKnown RBP21.1■□□□□ 0.97
CDH5-204ENST00000563425 CYP24A1Q07973 514 aa21.1■□□□□ 0.97
CDH5-204ENST00000563425 TAS1R3Q7RTX0 852 aa21.1■□□□□ 0.97
CDH5-204ENST00000563425 DAAM2Q86T65 1068 aa21.1■□□□□ 0.97
CDH5-204ENST00000563425 FAM71AQ8IYT1 594 aa21.1■□□□□ 0.97
CDH5-204ENST00000563425 ACTRT1Q8TDG2 376 aa21.1■□□□□ 0.97
CDH5-204ENST00000563425 ZNF526Q8TF50 670 aaPredicted RBP21.1■□□□□ 0.97
CDH5-204ENST00000563425 DCPSQ96C86 337 aaKnown RBP21.1■□□□□ 0.97
CDH5-204ENST00000563425 HINFPQ9BQA5 517 aa21.1■□□□□ 0.97
CDH5-204ENST00000563425 ZNF302Q9NR11 478 aa21.1■□□□□ 0.97
CDH5-204ENST00000563425 HNRNPDLO14979 420 aaKnown RBP21.09■□□□□ 0.97
CDH5-204ENST00000563425 PEX10O60683 326 aa21.09■□□□□ 0.97
CDH5-204ENST00000563425 GTF2H1P32780 548 aa21.09■□□□□ 0.97
CDH5-204ENST00000563425 GPC3P51654 580 aa21.09■□□□□ 0.97
CDH5-204ENST00000563425 PPATQ06203 517 aa21.09■□□□□ 0.97
CDH5-204ENST00000563425 EMC2Q15006 297 aa21.09■□□□□ 0.97
CDH5-204ENST00000563425 USP37Q86T82 979 aa21.09■□□□□ 0.97
CDH5-204ENST00000563425 GPD1LQ8N335 351 aa21.09■□□□□ 0.97
CDH5-204ENST00000563425 METTL13Q8N6R0 699 aa21.09■□□□□ 0.97
CDH5-204ENST00000563425 KAT5Q92993 513 aa21.09■□□□□ 0.97
CDH5-204ENST00000563425 HES6Q96HZ4 224 aa21.09■□□□□ 0.97
CDH5-204ENST00000563425 KREMEN1Q96MU8 473 aa21.09■□□□□ 0.97
CDH5-204ENST00000563425 OSGEPQ9NPF4 335 aa21.09■□□□□ 0.97
CDH5-204ENST00000563425 SEPT11Q9NVA2 429 aaKnown RBP21.09■□□□□ 0.97
CDH5-204ENST00000563425 KCNG1Q9UIX4 513 aa21.09■□□□□ 0.97
CDH5-204ENST00000563425 ZC3H4Q9UPT8 1303 aaKnown RBP21.08■□□□□ 0.97
CDH5-204ENST00000563425 ADM5C9JUS6 153 aa21.08■□□□□ 0.97
CDH5-204ENST00000563425 BUB1BO60566 1050 aaPredicted RBP21.08■□□□□ 0.97
CDH5-204ENST00000563425 OATP04181 439 aa21.08■□□□□ 0.97
CDH5-204ENST00000563425 ABCB4P21439 1286 aa21.08■□□□□ 0.97
CDH5-204ENST00000563425 SEPT14Q6ZU15 432 aa21.08■□□□□ 0.97
CDH5-204ENST00000563425 ZNF771Q7L3S4 317 aaPredicted RBP21.08■□□□□ 0.97
CDH5-204ENST00000563425 SULF1Q8IWU6 871 aa21.08■□□□□ 0.97
CDH5-204ENST00000563425 KCNN1Q92952 543 aa21.08■□□□□ 0.97
CDH5-204ENST00000563425 POP1Q99575 1024 aaKnown RBP21.08■□□□□ 0.97
CDH5-204ENST00000563425 ISCUQ9H1K1 167 aa21.08■□□□□ 0.97
CDH5-204ENST00000563425 MED4Q9NPJ6 270 aa21.08■□□□□ 0.97
CDH5-204ENST00000563425 IGKV6D-21A0A0A0MT36 114 aa21.08■□□□□ 0.96
CDH5-204ENST00000563425 A0A0U1RQG5 324 aaPredicted RBP21.08■□□□□ 0.96
CDH5-204ENST00000563425 EDNRBP24530 442 aa21.08■□□□□ 0.96
CDH5-204ENST00000563425 POLGP54098 1239 aaPredicted RBP21.08■□□□□ 0.96
CDH5-204ENST00000563425 MFAP3P55082 362 aa21.08■□□□□ 0.96
CDH5-204ENST00000563425 RNASE9P60153 205 aaKnown RBP21.08■□□□□ 0.96
CDH5-204ENST00000563425 PPM1KQ8N3J5 372 aa21.08■□□□□ 0.96
CDH5-204ENST00000563425 PROCA1Q8NCQ7 364 aaPredicted RBP21.08■□□□□ 0.96
CDH5-204ENST00000563425 FAM71BQ8TC56 605 aa21.08■□□□□ 0.96
CDH5-204ENST00000563425 SHC3Q92529 594 aa21.08■□□□□ 0.96
CDH5-204ENST00000563425 ARHGEF26Q96DR7 871 aa21.08■□□□□ 0.96
CDH5-204ENST00000563425 SPATC1LQ9H0A9 340 aa21.08■□□□□ 0.96
CDH5-204ENST00000563425 THAP2Q9H0W7 228 aa21.08■□□□□ 0.96
CDH5-204ENST00000563425 DHX33Q9H6R0 707 aaKnown RBP21.08■□□□□ 0.96
CDH5-204ENST00000563425 NOCTQ9UK39 431 aaKnown RBP21.08■□□□□ 0.96
CDH5-204ENST00000563425 AMFRQ9UKV5 643 aa21.08■□□□□ 0.96
CDH5-204ENST00000563425 CEP104O60308 925 aa21.07■□□□□ 0.96
CDH5-204ENST00000563425 EPHB4P54760 987 aa21.07■□□□□ 0.96
CDH5-204ENST00000563425 TNNC1P63316 161 aa21.07■□□□□ 0.96
CDH5-204ENST00000563425 PTPROQ16827 1216 aa21.07■□□□□ 0.96
CDH5-204ENST00000563425 HSP90B2PQ58FF3 399 aa21.07■□□□□ 0.96
CDH5-204ENST00000563425 GADL1Q6ZQY3 521 aa21.07■□□□□ 0.96
CDH5-204ENST00000563425 IFT20Q8IY31 132 aa21.07■□□□□ 0.96
CDH5-204ENST00000563425 FBXL13Q8NEE6 735 aa21.07■□□□□ 0.96
CDH5-204ENST00000563425 SCFD2Q8WU76 684 aa21.07■□□□□ 0.96
CDH5-204ENST00000563425 CCDC102AQ96A19 550 aa21.07■□□□□ 0.96
CDH5-204ENST00000563425 BICD1Q96G01 975 aa21.07■□□□□ 0.96
CDH5-204ENST00000563425 GDAP1L1Q96MZ0 367 aa21.07■□□□□ 0.96
CDH5-204ENST00000563425 KRT12Q99456 494 aa21.07■□□□□ 0.96
CDH5-204ENST00000563425 NIFKQ9BYG3 293 aaKnown RBP21.07■□□□□ 0.96
CDH5-204ENST00000563425 GDF3Q9NR23 364 aa21.07■□□□□ 0.96
CDH5-204ENST00000563425 TOPORSQ9NS56 1045 aaPredicted RBP21.07■□□□□ 0.96
CDH5-204ENST00000563425 UTRNP46939 3433 aa21.07■□□□□ 0.96
CDH5-204ENST00000563425 A0A0G2JLL6 359 aaPredicted RBP21.06■□□□□ 0.96
CDH5-204ENST00000563425 SOWAHBA6NEL2 793 aa21.06■□□□□ 0.96
CDH5-204ENST00000563425 GLI1P08151 1106 aa21.06■□□□□ 0.96
CDH5-204ENST00000563425 SCP2P22307 547 aa21.06■□□□□ 0.96
CDH5-204ENST00000563425 IREB2P48200 963 aaKnown RBP21.06■□□□□ 0.96
CDH5-204ENST00000563425 HADHBP55084 474 aaKnown RBP21.06■□□□□ 0.96
CDH5-204ENST00000563425 TCEAL1Q15170 157 aa21.06■□□□□ 0.96
CDH5-204ENST00000563425 PRRT2Q7Z6L0 340 aaPredicted RBP21.06■□□□□ 0.96
CDH5-204ENST00000563425 RPUSD2Q8IZ73 545 aaKnown RBP21.06■□□□□ 0.96
CDH5-204ENST00000563425 RASGEF1CQ8N431 466 aa21.06■□□□□ 0.96
CDH5-204ENST00000563425 HELQQ8TDG4 1101 aa21.06■□□□□ 0.96
CDH5-204ENST00000563425 PORCNQ9H237 461 aa21.06■□□□□ 0.96
CDH5-204ENST00000563425 PGRMC1O00264 195 aaKnown RBP21.06■□□□□ 0.96
CDH5-204ENST00000563425 SGPL1O95470 568 aa21.06■□□□□ 0.96
CDH5-204ENST00000563425 CHRNB2P17787 502 aa21.06■□□□□ 0.96
CDH5-204ENST00000563425 UBA1P22314 1058 aaKnown RBP21.06■□□□□ 0.96
CDH5-204ENST00000563425 USP8P40818 1118 aa21.06■□□□□ 0.96
CDH5-204ENST00000563425 PRPF4BQ13523 1007 aaKnown RBP21.06■□□□□ 0.96
CDH5-204ENST00000563425 EMBQ6PCB8 327 aa21.06■□□□□ 0.96
CDH5-204ENST00000563425 SV2AQ7L0J3 742 aa21.06■□□□□ 0.96
CDH5-204ENST00000563425 TAS1R2Q8TE23 839 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms