RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 KIFAP3Q92845 792 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 ZNF668Q96K58 619 aaPredicted RBP11.43□□□□□ -0.58
TPM1-210ENST00000558264 ZBTB45Q96K62 511 aaPredicted RBP11.43□□□□□ -0.58
TPM1-210ENST00000558264 AGPAT1Q99943 283 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 SENP7Q9BQF6 1050 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 ST6GALNAC4Q9H4F1 302 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 ZNF302Q9NR11 478 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 STIM2Q9P246 746 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 COG5Q9UP83 839 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 EXOC7Q9UPT5 735 aa11.43□□□□□ -0.58
TPM1-210ENST00000558264 MAFGO15525 162 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 EIF3JO75822 258 aaKnown RBP11.42□□□□□ -0.58
TPM1-210ENST00000558264 DGAT1O75907 488 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 HEXIM1O94992 359 aaKnown RBP11.42□□□□□ -0.58
TPM1-210ENST00000558264 UBA1P22314 1058 aaKnown RBP11.42□□□□□ -0.58
TPM1-210ENST00000558264 ACOT2P49753 483 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 MYBPC2Q14324 1141 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 LY6KQ17RY6 165 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 LBX2Q6XYB7 198 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 NOP9Q86U38 636 aaKnown RBP11.42□□□□□ -0.58
TPM1-210ENST00000558264 TRIM50Q86XT4 487 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 ASAP3Q8TDY4 903 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 TATDN2Q93075 761 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 EPB41L5Q9HCM4 733 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 HPCAL4Q9UM19 191 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 LCTP09848 1927 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 SYNGAP1Q96PV0 1343 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 SOWAHBA6NEL2 793 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 CARSP49589 748 aaKnown RBP11.42□□□□□ -0.58
TPM1-210ENST00000558264 IRX3P78415 501 aaPredicted RBP11.42□□□□□ -0.58
TPM1-210ENST00000558264 DRP2Q13474 957 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 PRPF4BQ13523 1007 aaKnown RBP11.42□□□□□ -0.58
TPM1-210ENST00000558264 KIF22Q14807 665 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 MAP9Q49MG5 647 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 ZBTB41Q5SVQ8 909 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 USP38Q8NB14 1042 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 RDM1Q8NG50 284 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 IWS1Q96ST2 819 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 PCDHB18PQ96TA0 734 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 TIPINQ9BVW5 301 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 ANKFY1Q9P2R3 1169 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 PPP2R3BQ9Y5P8 575 aa11.42□□□□□ -0.58
TPM1-210ENST00000558264 BTNL10A8MVZ5 291 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 FTLP02792 175 aaPredicted RBP11.41□□□□□ -0.58
TPM1-210ENST00000558264 TUBBP07437 444 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 MMEP08473 750 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 ITGA4P13612 1032 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 MCM3P25205 808 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 COPB2P35606 906 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 LIG4P49917 911 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 ZNF211Q13398 564 aaPredicted RBP11.41□□□□□ -0.58
TPM1-210ENST00000558264 XKR3Q5GH77 459 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 SH3D19Q5HYK7 790 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 TMEM63BQ5T3F8 832 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 NT5DC3Q86UY8 548 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 CPNE8Q86YQ8 564 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 ZBTB10Q96DT7 871 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 CDHR1Q96JP9 859 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 IFT74Q96LB3 600 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 SPATC1LQ9H0A9 340 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 TXNRD2Q9NNW7 524 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 PDLIM7Q9NR12 457 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 NFU1Q9UMS0 254 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 NOC2LQ9Y3T9 749 aaKnown RBP11.41□□□□□ -0.58
TPM1-210ENST00000558264 NFASCO94856 1347 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 WDR81Q562E7 1941 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 RAD51CO43502 376 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 OATP04181 439 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 EDN1P05305 212 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 FAM153BP0C7A2 387 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 SSTR3P32745 418 aaPredicted RBP11.41□□□□□ -0.58
TPM1-210ENST00000558264 GUCY2FP51841 1108 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 NLRP11P59045 1033 aaKnown RBP11.41□□□□□ -0.58
TPM1-210ENST00000558264 CYP24A1Q07973 514 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 IFI16Q16666 785 aaKnown RBP11.41□□□□□ -0.58
TPM1-210ENST00000558264 FAM153CQ494X1 144 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 KRT39Q6A163 491 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 SCARA3Q6AZY7 606 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 AADACL2Q6P093 401 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 SV2AQ7L0J3 742 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 PHLDB2Q86SQ0 1253 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 MCPH1Q8NEM0 835 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 AENQ8WTP8 325 aaKnown RBP11.41□□□□□ -0.58
TPM1-210ENST00000558264 RFFLQ8WZ73 363 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 BTBD6Q96KE9 485 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 DDX47Q9H0S4 455 aaKnown RBP11.41□□□□□ -0.58
TPM1-210ENST00000558264 FAM153AQ9UHL3 310 aa11.41□□□□□ -0.58
TPM1-210ENST00000558264 WDR90Q96KV7 1748 aa11.4□□□□□ -0.58
TPM1-210ENST00000558264 TMEM253P0C7T8 217 aa11.4□□□□□ -0.58
TPM1-210ENST00000558264 KRT5P13647 590 aa11.4□□□□□ -0.58
TPM1-210ENST00000558264 CHRNB2P17787 502 aa11.4□□□□□ -0.58
TPM1-210ENST00000558264 GGCXP38435 758 aa11.4□□□□□ -0.58
TPM1-210ENST00000558264 ITIH3Q06033 890 aa11.4□□□□□ -0.58
TPM1-210ENST00000558264 GPS2Q13227 327 aa11.4□□□□□ -0.58
TPM1-210ENST00000558264 HSP90B2PQ58FF3 399 aa11.4□□□□□ -0.58
TPM1-210ENST00000558264 SPOPLQ6IQ16 392 aa11.4□□□□□ -0.58
TPM1-210ENST00000558264 GPD1LQ8N335 351 aa11.4□□□□□ -0.58
TPM1-210ENST00000558264 TSEN2Q8NCE0 465 aaKnown RBP11.4□□□□□ -0.58
TPM1-210ENST00000558264 CHST13Q8NET6 341 aa11.4□□□□□ -0.58
TPM1-210ENST00000558264 EPS8L1Q8TE68 723 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms